RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 ZNF696Q9H7X3 374 aa16.32■□□□□ 0.2
PHGDH-208ENST00000641023 ZNF451Q9Y4E5 1061 aa16.32■□□□□ 0.2
PHGDH-208ENST00000641023 LMO7DNF2Z398 122 aa16.31■□□□□ 0.2
PHGDH-208ENST00000641023 HMGN4O00479 90 aa16.31■□□□□ 0.2
PHGDH-208ENST00000641023 DPM1O60762 260 aa16.31■□□□□ 0.2
PHGDH-208ENST00000641023 B4GALT2O60909 372 aa16.31■□□□□ 0.2
PHGDH-208ENST00000641023 BCHEP06276 602 aa16.31■□□□□ 0.2
PHGDH-208ENST00000641023 CSNK1EP49674 416 aaKnown RBP16.31■□□□□ 0.2
PHGDH-208ENST00000641023 ANXA11P50995 505 aaKnown RBP16.31■□□□□ 0.2
PHGDH-208ENST00000641023 LIM2P55344 173 aa16.31■□□□□ 0.2
PHGDH-208ENST00000641023 ITGA1P56199 1179 aa16.31■□□□□ 0.2
PHGDH-208ENST00000641023 IFI44LQ53G44 452 aa16.31■□□□□ 0.2
PHGDH-208ENST00000641023 TMEM179BQ7Z7N9 219 aa16.31■□□□□ 0.2
PHGDH-208ENST00000641023 HS3ST5Q8IZT8 346 aa16.31■□□□□ 0.2
PHGDH-208ENST00000641023 CSNK1A1LQ8N752 337 aa16.31■□□□□ 0.2
PHGDH-208ENST00000641023 SFXN5Q8TD22 340 aa16.31■□□□□ 0.2
PHGDH-208ENST00000641023 DUSP15Q9H1R2 295 aaPredicted RBP16.31■□□□□ 0.2
PHGDH-208ENST00000641023 RUBCNLQ9H714 662 aa16.31■□□□□ 0.2
PHGDH-208ENST00000641023 REEP1Q9H902 201 aa16.31■□□□□ 0.2
PHGDH-208ENST00000641023 PRDM9Q9NQV7 894 aa16.31■□□□□ 0.2
PHGDH-208ENST00000641023 DNAAF2Q9NVR5 837 aaKnown RBP16.31■□□□□ 0.2
PHGDH-208ENST00000641023 KCMF1Q9P0J7 381 aa16.31■□□□□ 0.2
PHGDH-208ENST00000641023 C3orf18Q9UK00 162 aa16.31■□□□□ 0.2
PHGDH-208ENST00000641023 SPACA6W5XKT8 324 aa16.31■□□□□ 0.2
PHGDH-208ENST00000641023 LILRA5A6NI73 299 aa16.31■□□□□ 0.2
PHGDH-208ENST00000641023 TMEM229AB2RXF0 380 aa16.31■□□□□ 0.2
PHGDH-208ENST00000641023 PLOD2O00469 737 aa16.31■□□□□ 0.2
PHGDH-208ENST00000641023 GNAO1P09471 354 aa16.31■□□□□ 0.2
PHGDH-208ENST00000641023 TFPTP0C1Z6 253 aa16.31■□□□□ 0.2
PHGDH-208ENST00000641023 ST6GAL1P15907 406 aa16.31■□□□□ 0.2
PHGDH-208ENST00000641023 AFF3P51826 1226 aaKnown RBP16.31■□□□□ 0.2
PHGDH-208ENST00000641023 PRR5P85299 388 aa16.31■□□□□ 0.2
PHGDH-208ENST00000641023 ZNF750Q32MQ0 723 aa16.31■□□□□ 0.2
PHGDH-208ENST00000641023 ARMC8Q8IUR7 673 aa16.31■□□□□ 0.2
PHGDH-208ENST00000641023 METTL25Q8N6Q8 603 aa16.31■□□□□ 0.2
PHGDH-208ENST00000641023 ARL10Q8N8L6 244 aa16.31■□□□□ 0.2
PHGDH-208ENST00000641023 NRBF2Q96F24 287 aa16.31■□□□□ 0.2
PHGDH-208ENST00000641023 MAGED4Q96JG8 741 aa16.31■□□□□ 0.2
PHGDH-208ENST00000641023 SMURF2Q9HAU4 748 aa16.31■□□□□ 0.2
PHGDH-208ENST00000641023 RAB23Q9ULC3 237 aa16.31■□□□□ 0.2
PHGDH-208ENST00000641023 BCAT2O15382 392 aaPredicted RBP16.3■□□□□ 0.2
PHGDH-208ENST00000641023 PDE9AO76083 593 aa16.3■□□□□ 0.2
PHGDH-208ENST00000641023 DIRAS1O95057 198 aa16.3■□□□□ 0.2
PHGDH-208ENST00000641023 FHP07954 510 aa16.3■□□□□ 0.2
PHGDH-208ENST00000641023 ITGA2P17301 1181 aa16.3■□□□□ 0.2
PHGDH-208ENST00000641023 MATN1P21941 496 aa16.3■□□□□ 0.2
PHGDH-208ENST00000641023 CAPZBP47756 277 aa16.3■□□□□ 0.2
PHGDH-208ENST00000641023 PRKAG1P54619 331 aa16.3■□□□□ 0.2
PHGDH-208ENST00000641023 VSX2P58304 361 aaPredicted RBP16.3■□□□□ 0.2
PHGDH-208ENST00000641023 ADARB1P78563 741 aaKnown RBP16.3■□□□□ 0.2
PHGDH-208ENST00000641023 RUNX2Q13950 521 aa16.3■□□□□ 0.2
PHGDH-208ENST00000641023 DEFB133Q30KQ1 61 aa16.3■□□□□ 0.2
PHGDH-208ENST00000641023 ZC3H12BQ5HYM0 836 aaKnown RBP16.3■□□□□ 0.2
PHGDH-208ENST00000641023 C17orf82Q86X59 251 aaPredicted RBP16.3■□□□□ 0.2
PHGDH-208ENST00000641023 SLC44A2Q8IWA5 706 aaPredicted RBP16.3■□□□□ 0.2
PHGDH-208ENST00000641023 C19orf47Q8N9M1 422 aaKnown RBP16.3■□□□□ 0.2
PHGDH-208ENST00000641023 OR56A1Q8NGH5 318 aa16.3■□□□□ 0.2
PHGDH-208ENST00000641023 RAB8BQ92930 207 aa16.3■□□□□ 0.2
PHGDH-208ENST00000641023 TMEM19Q96HH6 336 aa16.3■□□□□ 0.2
PHGDH-208ENST00000641023 ZNF681Q96N22 645 aa16.3■□□□□ 0.2
PHGDH-208ENST00000641023 TRAPPC9Q96Q05 1148 aa16.3■□□□□ 0.2
PHGDH-208ENST00000641023 C3orf14Q9HBI5 128 aa16.3■□□□□ 0.2
PHGDH-208ENST00000641023 LYRM4Q9HD34 91 aa16.3■□□□□ 0.2
PHGDH-208ENST00000641023 P2RX2Q9UBL9 471 aa16.3■□□□□ 0.2
PHGDH-208ENST00000641023 MYRFQ9Y2G1 1151 aa16.3■□□□□ 0.2
PHGDH-208ENST00000641023 SAMHD1Q9Y3Z3 626 aaKnown RBP16.3■□□□□ 0.2
PHGDH-208ENST00000641023 ORC6Q9Y5N6 252 aa16.3■□□□□ 0.2
PHGDH-208ENST00000641023 SLC22A7Q9Y694 548 aa16.3■□□□□ 0.2
PHGDH-208ENST00000641023 HS6ST1O60243 411 aa16.3■□□□□ 0.2
PHGDH-208ENST00000641023 PGM3O95394 542 aa16.3■□□□□ 0.2
PHGDH-208ENST00000641023 H6PDO95479 791 aa16.3■□□□□ 0.2
PHGDH-208ENST00000641023 PROS1P07225 676 aa16.3■□□□□ 0.2
PHGDH-208ENST00000641023 FPR1P21462 350 aa16.3■□□□□ 0.2
PHGDH-208ENST00000641023 PRKACGP22612 351 aa16.3■□□□□ 0.2
PHGDH-208ENST00000641023 SNRPNP63162 240 aaKnown RBP16.3■□□□□ 0.2
PHGDH-208ENST00000641023 RFX4Q33E94 735 aa16.3■□□□□ 0.2
PHGDH-208ENST00000641023 ZIK1Q3SY52 487 aaPredicted RBP16.3■□□□□ 0.2
PHGDH-208ENST00000641023 IQCCQ4KMZ1 466 aa16.3■□□□□ 0.2
PHGDH-208ENST00000641023 TTC23Q5W5X9 447 aa16.3■□□□□ 0.2
PHGDH-208ENST00000641023 OGFOD3Q6PK18 319 aa16.3■□□□□ 0.2
PHGDH-208ENST00000641023 TMEM107Q6UX40 140 aa16.3■□□□□ 0.2
PHGDH-208ENST00000641023 ABCA7Q8IZY2 2146 aa16.3■□□□□ 0.2
PHGDH-208ENST00000641023 KLHL6Q8WZ60 621 aa16.3■□□□□ 0.2
PHGDH-208ENST00000641023 RMND5BQ96G75 393 aaPredicted RBP16.3■□□□□ 0.2
PHGDH-208ENST00000641023 FBXL20Q96IG2 436 aa16.3■□□□□ 0.2
PHGDH-208ENST00000641023 C10orf90Q96M02 699 aa16.3■□□□□ 0.2
PHGDH-208ENST00000641023 ZNF347Q96SE7 839 aa16.3■□□□□ 0.2
PHGDH-208ENST00000641023 OR51I1Q9H343 314 aa16.3■□□□□ 0.2
PHGDH-208ENST00000641023 IL21RQ9HBE5 538 aa16.3■□□□□ 0.2
PHGDH-208ENST00000641023 EMC8O43402 210 aa16.29■□□□□ 0.2
PHGDH-208ENST00000641023 OR12D1P0DN82 309 aa16.29■□□□□ 0.2
PHGDH-208ENST00000641023 ALPPL2P10696 532 aa16.29■□□□□ 0.2
PHGDH-208ENST00000641023 PPP2R1BP30154 601 aa16.29■□□□□ 0.2
PHGDH-208ENST00000641023 PPM1FP49593 454 aaPredicted RBP16.29■□□□□ 0.2
PHGDH-208ENST00000641023 KHKP50053 298 aa16.29■□□□□ 0.2
PHGDH-208ENST00000641023 RAD23AP54725 363 aa16.29■□□□□ 0.2
PHGDH-208ENST00000641023 DUSP2Q05923 314 aa16.29■□□□□ 0.2
PHGDH-208ENST00000641023 ISLR2Q6UXK2 745 aa16.29■□□□□ 0.2
PHGDH-208ENST00000641023 MAMSTRQ6ZN01 415 aa16.29■□□□□ 0.2
PHGDH-208ENST00000641023 USP51Q70EK9 711 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms