RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 IFNL1Q8IU54 200 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 SLC9A6Q92581 669 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 SCLYQ96I15 445 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 LRR1Q96L50 414 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 C12orf66Q96MD2 445 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 FRG2BQ96QU4 278 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 OARD1Q9Y530 152 aa13.1□□□□□ -0.31
SCARB2-227ENST00000640957 SPEGQ15772 3267 aa13.09□□□□□ -0.31
SCARB2-227ENST00000640957 NME6O75414 186 aaPredicted RBP13.09□□□□□ -0.31
SCARB2-227ENST00000640957 LALBAP00709 142 aa13.09□□□□□ -0.31
SCARB2-227ENST00000640957 DGKAP23743 735 aa13.09□□□□□ -0.31
SCARB2-227ENST00000640957 ABRQ12979 859 aa13.09□□□□□ -0.31
SCARB2-227ENST00000640957 PIN1Q13526 163 aaPredicted RBP13.09□□□□□ -0.31
SCARB2-227ENST00000640957 FGL2Q14314 439 aa13.09□□□□□ -0.31
SCARB2-227ENST00000640957 ESPNLQ6ZVH7 1005 aa13.09□□□□□ -0.31
SCARB2-227ENST00000640957 ZFP3Q96NJ6 502 aa13.09□□□□□ -0.31
SCARB2-227ENST00000640957 SLC35A5Q9BS91 424 aa13.09□□□□□ -0.31
SCARB2-227ENST00000640957 KLHL21Q9UJP4 597 aa13.09□□□□□ -0.31
SCARB2-227ENST00000640957 TP53BP1Q12888 1972 aaPredicted RBP13.09□□□□□ -0.31
SCARB2-227ENST00000640957 HEPACAM2A8MVW5 462 aa13.09□□□□□ -0.31
SCARB2-227ENST00000640957 CHURC1-FNTBB4DL54 471 aa13.09□□□□□ -0.31
SCARB2-227ENST00000640957 PQBP1O60828 265 aaKnown RBP13.09□□□□□ -0.31
SCARB2-227ENST00000640957 HOXB9P17482 250 aaPredicted RBP13.09□□□□□ -0.31
SCARB2-227ENST00000640957 POU3F2P20265 443 aaPredicted RBP13.09□□□□□ -0.31
SCARB2-227ENST00000640957 M6PRP20645 277 aa13.09□□□□□ -0.31
SCARB2-227ENST00000640957 LHCGRP22888 699 aa13.09□□□□□ -0.31
SCARB2-227ENST00000640957 OR1D2P34982 312 aa13.09□□□□□ -0.31
SCARB2-227ENST00000640957 OPRD1P41143 372 aa13.09□□□□□ -0.31
SCARB2-227ENST00000640957 DOC2AQ14183 400 aa13.09□□□□□ -0.31
SCARB2-227ENST00000640957 ZNF791Q3KP31 576 aaPredicted RBP13.09□□□□□ -0.31
SCARB2-227ENST00000640957 TMEM81Q6P7N7 255 aa13.09□□□□□ -0.31
SCARB2-227ENST00000640957 MARCH9Q86YJ5 346 aa13.09□□□□□ -0.31
SCARB2-227ENST00000640957 FAM46DQ8NEK8 389 aa13.09□□□□□ -0.31
SCARB2-227ENST00000640957 DBF4BQ8NFT6 615 aa13.09□□□□□ -0.31
SCARB2-227ENST00000640957 TTTY10Q9BZA0 68 aa13.09□□□□□ -0.31
SCARB2-227ENST00000640957 P2RY12Q9H244 342 aa13.09□□□□□ -0.31
SCARB2-227ENST00000640957 SAV1Q9H4B6 383 aaPredicted RBP13.09□□□□□ -0.31
SCARB2-227ENST00000640957 EXTL2Q9UBQ6 330 aa13.09□□□□□ -0.31
SCARB2-227ENST00000640957 MAPRE3Q9UPY8 281 aa13.09□□□□□ -0.31
SCARB2-227ENST00000640957 CHP2O43745 196 aa13.08□□□□□ -0.31
SCARB2-227ENST00000640957 HYAL3O43820 417 aaPredicted RBP13.08□□□□□ -0.31
SCARB2-227ENST00000640957 CD3GP09693 182 aa13.08□□□□□ -0.31
SCARB2-227ENST00000640957 CD22P20273 847 aa13.08□□□□□ -0.31
SCARB2-227ENST00000640957 HLA-DMAP28067 261 aa13.08□□□□□ -0.31
SCARB2-227ENST00000640957 LIM2P55344 173 aa13.08□□□□□ -0.31
SCARB2-227ENST00000640957 PLD1Q13393 1074 aa13.08□□□□□ -0.31
SCARB2-227ENST00000640957 GPR176Q14439 515 aa13.08□□□□□ -0.31
SCARB2-227ENST00000640957 EIF4HQ15056 248 aaKnown RBP13.08□□□□□ -0.31
SCARB2-227ENST00000640957 GARNL3Q5VVW2 1013 aa13.08□□□□□ -0.31
SCARB2-227ENST00000640957 TPGS1Q6ZTW0 290 aa13.08□□□□□ -0.31
SCARB2-227ENST00000640957 KIAA0907Q7Z7F0 614 aaPredicted RBP13.08□□□□□ -0.31
SCARB2-227ENST00000640957 PIAS4Q8N2W9 510 aaPredicted RBP13.08□□□□□ -0.31
SCARB2-227ENST00000640957 GDPD1Q8N9F7 314 aa13.08□□□□□ -0.31
SCARB2-227ENST00000640957 BOLLQ8N9W6 283 aaKnown RBP13.08□□□□□ -0.31
SCARB2-227ENST00000640957 GCDHQ92947 438 aaPredicted RBP13.08□□□□□ -0.31
SCARB2-227ENST00000640957 TADA1Q96BN2 335 aa13.08□□□□□ -0.31
SCARB2-227ENST00000640957 P2RY13Q9BPV8 354 aa13.08□□□□□ -0.31
SCARB2-227ENST00000640957 IL26Q9NPH9 171 aa13.08□□□□□ -0.31
SCARB2-227ENST00000640957 SPATA6Q9NWH7 488 aaPredicted RBP13.08□□□□□ -0.31
SCARB2-227ENST00000640957 B3GNT2Q9NY97 397 aa13.08□□□□□ -0.31
SCARB2-227ENST00000640957 ING4Q9UNL4 249 aa13.08□□□□□ -0.31
SCARB2-227ENST00000640957 FFAR1O14842 300 aa13.08□□□□□ -0.32
SCARB2-227ENST00000640957 ATP5C1P36542 298 aaKnown RBP13.08□□□□□ -0.32
SCARB2-227ENST00000640957 NUDT1P36639 197 aa13.08□□□□□ -0.32
SCARB2-227ENST00000640957 SLC11A2P49281 568 aa13.08□□□□□ -0.32
SCARB2-227ENST00000640957 XKP51811 444 aa13.08□□□□□ -0.32
SCARB2-227ENST00000640957 RHOAP61586 193 aa13.08□□□□□ -0.32
SCARB2-227ENST00000640957 RHAGQ02094 409 aa13.08□□□□□ -0.32
SCARB2-227ENST00000640957 SLC5A12Q1EHB4 618 aa13.08□□□□□ -0.32
SCARB2-227ENST00000640957 TUSC1Q2TAM9 212 aa13.08□□□□□ -0.32
SCARB2-227ENST00000640957 CCSMST1Q4G0I0 132 aa13.08□□□□□ -0.32
SCARB2-227ENST00000640957 AUTS2Q8WXX7 1259 aa13.08□□□□□ -0.32
SCARB2-227ENST00000640957 HYLS1Q96M11 299 aa13.08□□□□□ -0.32
SCARB2-227ENST00000640957 SLC32A1Q9H598 525 aa13.08□□□□□ -0.32
SCARB2-227ENST00000640957 CPNE7Q9UBL6 633 aa13.08□□□□□ -0.32
SCARB2-227ENST00000640957 NUP50Q9UKX7 468 aa13.08□□□□□ -0.32
SCARB2-227ENST00000640957 A0A0B4J203 849 aa13.08□□□□□ -0.32
SCARB2-227ENST00000640957 PRR23AA6NEV1 266 aa13.08□□□□□ -0.32
SCARB2-227ENST00000640957 C1SP09871 688 aa13.08□□□□□ -0.32
SCARB2-227ENST00000640957 OR12D1P0DN82 309 aa13.08□□□□□ -0.32
SCARB2-227ENST00000640957 PRPS2P11908 318 aa13.08□□□□□ -0.32
SCARB2-227ENST00000640957 PRPS1L1P21108 318 aa13.08□□□□□ -0.32
SCARB2-227ENST00000640957 BNC1Q01954 994 aa13.08□□□□□ -0.32
SCARB2-227ENST00000640957 ERICH5Q6P6B1 374 aa13.08□□□□□ -0.32
SCARB2-227ENST00000640957 SYT9Q86SS6 491 aa13.08□□□□□ -0.32
SCARB2-227ENST00000640957 IZUMO1Q8IYV9 350 aa13.08□□□□□ -0.32
SCARB2-227ENST00000640957 BBS10Q8TAM1 723 aa13.08□□□□□ -0.32
SCARB2-227ENST00000640957 RAET1EQ8TD07 263 aa13.08□□□□□ -0.32
SCARB2-227ENST00000640957 SMAP2Q8WU79 429 aaPredicted RBP13.08□□□□□ -0.32
SCARB2-227ENST00000640957 WDR89Q96FK6 387 aaPredicted RBP13.08□□□□□ -0.32
SCARB2-227ENST00000640957 TOE1Q96GM8 510 aaKnown RBP13.08□□□□□ -0.32
SCARB2-227ENST00000640957 C1orf74Q96LT6 269 aa13.08□□□□□ -0.32
SCARB2-227ENST00000640957 POLR2J3Q9H1A7 115 aaKnown RBP13.08□□□□□ -0.32
SCARB2-227ENST00000640957 NIPAL2Q9H841 368 aa13.08□□□□□ -0.32
SCARB2-227ENST00000640957 PAK6Q9NQU5 681 aaPredicted RBP13.08□□□□□ -0.32
SCARB2-227ENST00000640957 NANSQ9NR45 359 aa13.08□□□□□ -0.32
SCARB2-227ENST00000640957 NLGN3Q9NZ94 848 aa13.08□□□□□ -0.32
SCARB2-227ENST00000640957 IL17CQ9P0M4 197 aa13.08□□□□□ -0.32
SCARB2-227ENST00000640957 PCDHB7Q9Y5E2 793 aa13.08□□□□□ -0.32
SCARB2-227ENST00000640957 CACNA1CQ13936 2221 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms