RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 C16orf78Q8WTQ4 265 aa24.86■■□□□ 1.57
VEGFA-231ENST00000640499 VMP1Q96GC9 406 aa24.86■■□□□ 1.57
VEGFA-231ENST00000640499 ZNF354BQ96LW1 612 aa24.86■■□□□ 1.57
VEGFA-231ENST00000640499 RNF32Q9H0A6 362 aa24.86■■□□□ 1.57
VEGFA-231ENST00000640499 WDR41Q9HAD4 459 aa24.86■■□□□ 1.57
VEGFA-231ENST00000640499 RSL1D1O76021 490 aaKnown RBP24.85■■□□□ 1.57
VEGFA-231ENST00000640499 LINC00032P0C843 101 aa24.85■■□□□ 1.57
VEGFA-231ENST00000640499 TNNI3P19429 210 aa24.85■■□□□ 1.57
VEGFA-231ENST00000640499 TNFSF10P50591 281 aa24.85■■□□□ 1.57
VEGFA-231ENST00000640499 CLCN2P51788 898 aa24.85■■□□□ 1.57
VEGFA-231ENST00000640499 MLF1P58340 268 aa24.85■■□□□ 1.57
VEGFA-231ENST00000640499 TAS2R50P59544 299 aa24.85■■□□□ 1.57
VEGFA-231ENST00000640499 SPDYAQ5MJ70 313 aa24.85■■□□□ 1.57
VEGFA-231ENST00000640499 SH2D4BQ5SQS7 431 aa24.85■■□□□ 1.57
VEGFA-231ENST00000640499 ZNF468Q5VIY5 522 aaPredicted RBP24.85■■□□□ 1.57
VEGFA-231ENST00000640499 ST13P4Q8IZP2 240 aaPredicted RBP24.85■■□□□ 1.57
VEGFA-231ENST00000640499 OR1N1Q8NGS0 311 aa24.85■■□□□ 1.57
VEGFA-231ENST00000640499 AGR3Q8TD06 166 aa24.85■■□□□ 1.57
VEGFA-231ENST00000640499 SLC2A12Q8TD20 617 aa24.85■■□□□ 1.57
VEGFA-231ENST00000640499 DAZLQ92904 295 aaKnown RBP24.85■■□□□ 1.57
VEGFA-231ENST00000640499 DGAT2Q96PD7 388 aa24.85■■□□□ 1.57
VEGFA-231ENST00000640499 TRIM4Q9C037 500 aa24.85■■□□□ 1.57
VEGFA-231ENST00000640499 OR8D2Q9GZM6 311 aa24.85■■□□□ 1.57
VEGFA-231ENST00000640499 STMN4Q9H169 189 aaPredicted RBP24.85■■□□□ 1.57
VEGFA-231ENST00000640499 EML4Q9HC35 981 aaKnown RBP24.85■■□□□ 1.57
VEGFA-231ENST00000640499 DLGAP4Q9Y2H0 992 aa24.85■■□□□ 1.57
VEGFA-231ENST00000640499 PCDHGA10Q9Y5H3 936 aa24.85■■□□□ 1.57
VEGFA-231ENST00000640499 C1orf226A1L170 272 aa24.84■■□□□ 1.57
VEGFA-231ENST00000640499 IGKV3-11P04433 115 aa24.84■■□□□ 1.57
VEGFA-231ENST00000640499 SERPINE1P05121 402 aa24.84■■□□□ 1.57
VEGFA-231ENST00000640499 IL3P08700 152 aa24.84■■□□□ 1.57
VEGFA-231ENST00000640499 SLC35E2P0CK97 266 aa24.84■■□□□ 1.57
VEGFA-231ENST00000640499 BGNP21810 368 aa24.84■■□□□ 1.57
VEGFA-231ENST00000640499 SLC18A1P54219 525 aa24.84■■□□□ 1.57
VEGFA-231ENST00000640499 ARG2P78540 354 aa24.84■■□□□ 1.57
VEGFA-231ENST00000640499 DUSP2Q05923 314 aa24.84■■□□□ 1.57
VEGFA-231ENST00000640499 BIKQ13323 160 aa24.84■■□□□ 1.57
VEGFA-231ENST00000640499 MEP1AQ16819 746 aa24.84■■□□□ 1.57
VEGFA-231ENST00000640499 IMPG1Q17R60 797 aa24.84■■□□□ 1.57
VEGFA-231ENST00000640499 PRSS53Q2L4Q9 553 aa24.84■■□□□ 1.57
VEGFA-231ENST00000640499 C16orf47Q6ZP98 133 aaPredicted RBP24.84■■□□□ 1.57
VEGFA-231ENST00000640499 LGI4Q8N135 537 aa24.84■■□□□ 1.57
VEGFA-231ENST00000640499 SLC5A8Q8N695 610 aa24.84■■□□□ 1.57
VEGFA-231ENST00000640499 ANKRD42Q8N9B4 389 aa24.84■■□□□ 1.57
VEGFA-231ENST00000640499 OR4K14Q8NGD5 310 aa24.84■■□□□ 1.57
VEGFA-231ENST00000640499 TWIST2Q8WVJ9 160 aa24.84■■□□□ 1.57
VEGFA-231ENST00000640499 RBM18Q96H35 190 aaKnown RBP24.84■■□□□ 1.57
VEGFA-231ENST00000640499 SENP5Q96HI0 755 aaPredicted RBP24.84■■□□□ 1.57
VEGFA-231ENST00000640499 DEFB126Q9BYW3 111 aa24.84■■□□□ 1.57
VEGFA-231ENST00000640499 LIN28AQ9H9Z2 209 aaKnown RBP24.84■■□□□ 1.57
VEGFA-231ENST00000640499 EXO1Q9UQ84 846 aaKnown RBP24.84■■□□□ 1.57
VEGFA-231ENST00000640499 FASNP49327 2511 aaKnown RBP24.83■■□□□ 1.57
VEGFA-231ENST00000640499 SLC28A1O00337 649 aa24.83■■□□□ 1.57
VEGFA-231ENST00000640499 CLPSP04118 112 aa24.83■■□□□ 1.57
VEGFA-231ENST00000640499 SOX18P35713 384 aa24.83■■□□□ 1.57
VEGFA-231ENST00000640499 CD96P40200 585 aa24.83■■□□□ 1.57
VEGFA-231ENST00000640499 AGBL2Q5U5Z8 902 aa24.83■■□□□ 1.57
VEGFA-231ENST00000640499 FAM180BQ6P0A1 224 aa24.83■■□□□ 1.57
VEGFA-231ENST00000640499 C7orf57Q8NEG2 295 aa24.83■■□□□ 1.57
VEGFA-231ENST00000640499 THAP3Q8WTV1 239 aaPredicted RBP24.83■■□□□ 1.57
VEGFA-231ENST00000640499 ZNF681Q96N22 645 aa24.83■■□□□ 1.57
VEGFA-231ENST00000640499 SORT1Q99523 831 aa24.83■■□□□ 1.57
VEGFA-231ENST00000640499 TEKT2Q9UIF3 430 aa24.83■■□□□ 1.57
VEGFA-231ENST00000640499 POLR3HQ9Y535 204 aaPredicted RBP24.83■■□□□ 1.57
VEGFA-231ENST00000640499 PRRC2CQ9Y520 2896 aaKnown RBP24.82■■□□□ 1.56
VEGFA-231ENST00000640499 PIP5K1BO14986 540 aa24.82■■□□□ 1.56
VEGFA-231ENST00000640499 GUCY1B2O75343 617 aa24.82■■□□□ 1.56
VEGFA-231ENST00000640499 ANXA4P09525 319 aaPredicted RBP24.82■■□□□ 1.56
VEGFA-231ENST00000640499 PIK3R1P27986 724 aa24.82■■□□□ 1.56
VEGFA-231ENST00000640499 XKP51811 444 aa24.82■■□□□ 1.56
VEGFA-231ENST00000640499 PLIN5Q00G26 463 aa24.82■■□□□ 1.56
VEGFA-231ENST00000640499 TUBA3CQ13748 450 aa24.82■■□□□ 1.56
VEGFA-231ENST00000640499 ZNF169Q14929 603 aaPredicted RBP24.82■■□□□ 1.56
VEGFA-231ENST00000640499 TLR1Q15399 786 aa24.82■■□□□ 1.56
VEGFA-231ENST00000640499 NOXRED1Q6NXP6 359 aa24.82■■□□□ 1.56
VEGFA-231ENST00000640499 TUBA3EQ6PEY2 450 aa24.82■■□□□ 1.56
VEGFA-231ENST00000640499 SREK1Q8WXA9 508 aaKnown RBP24.82■■□□□ 1.56
VEGFA-231ENST00000640499 C19orf60Q96EN9 201 aa24.82■■□□□ 1.56
VEGFA-231ENST00000640499 CNRIP1Q96F85 164 aaPredicted RBP24.82■■□□□ 1.56
VEGFA-231ENST00000640499 FCRL1Q96LA6 429 aa24.82■■□□□ 1.56
VEGFA-231ENST00000640499 C3orf30Q96M34 536 aa24.82■■□□□ 1.56
VEGFA-231ENST00000640499 ANKRD10Q9NXR5 420 aa24.82■■□□□ 1.56
VEGFA-231ENST00000640499 GIMAP2Q9UG22 337 aa24.82■■□□□ 1.56
VEGFA-231ENST00000640499 NTNG1Q9Y2I2 539 aa24.82■■□□□ 1.56
VEGFA-231ENST00000640499 GNG14A0A1W2PPG7 69 aa24.81■■□□□ 1.56
VEGFA-231ENST00000640499 DYTNA2CJ06 578 aa24.81■■□□□ 1.56
VEGFA-231ENST00000640499 OR5H15A6NDH6 313 aa24.81■■□□□ 1.56
VEGFA-231ENST00000640499 TTLL8A6PVC2 850 aa24.81■■□□□ 1.56
VEGFA-231ENST00000640499 GABRR3A8MPY1 467 aa24.81■■□□□ 1.56
VEGFA-231ENST00000640499 TMEM114B3SHH9 223 aa24.81■■□□□ 1.56
VEGFA-231ENST00000640499 LSM1O15116 133 aaKnown RBP24.81■■□□□ 1.56
VEGFA-231ENST00000640499 UQCRHP07919 91 aa24.81■■□□□ 1.56
VEGFA-231ENST00000640499 CT62P0C5K7 136 aa24.81■■□□□ 1.56
VEGFA-231ENST00000640499 CPMP14384 443 aa24.81■■□□□ 1.56
VEGFA-231ENST00000640499 TACR1P25103 407 aa24.81■■□□□ 1.56
VEGFA-231ENST00000640499 GALNSP34059 522 aa24.81■■□□□ 1.56
VEGFA-231ENST00000640499 ABCE1P61221 599 aaKnown RBP24.81■■□□□ 1.56
VEGFA-231ENST00000640499 IGFBP7Q16270 282 aa24.81■■□□□ 1.56
VEGFA-231ENST00000640499 SPRED3Q2MJR0 410 aa24.81■■□□□ 1.56
VEGFA-231ENST00000640499 RFTN2Q52LD8 501 aaPredicted RBP24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms