RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 PATE1Q8WXA2 126 aa14.3□□□□□ -0.12
TRIM3-215ENST00000639856 CSF3RQ99062 836 aa14.3□□□□□ -0.12
TRIM3-215ENST00000639856 ORAI3Q9BRQ5 295 aa14.3□□□□□ -0.12
TRIM3-215ENST00000639856 DDX31Q9H8H2 851 aaKnown RBP14.3□□□□□ -0.12
TRIM3-215ENST00000639856 MRPS30Q9NP92 439 aaKnown RBP14.3□□□□□ -0.12
TRIM3-215ENST00000639856 ERVK-18Q9QC07 812 aa14.3□□□□□ -0.12
TRIM3-215ENST00000639856 PCOLCE2Q9UKZ9 415 aa14.3□□□□□ -0.12
TRIM3-215ENST00000639856 PSME2Q9UL46 239 aa14.3□□□□□ -0.12
TRIM3-215ENST00000639856 RAB23Q9ULC3 237 aa14.3□□□□□ -0.12
TRIM3-215ENST00000639856 ZNF451Q9Y4E5 1061 aa14.3□□□□□ -0.12
TRIM3-215ENST00000639856 ZNF99A8MXY4 864 aaPredicted RBP14.3□□□□□ -0.12
TRIM3-215ENST00000639856 PCDHGA12O60330 932 aa14.3□□□□□ -0.12
TRIM3-215ENST00000639856 F3P13726 295 aa14.3□□□□□ -0.12
TRIM3-215ENST00000639856 ANXA8P13928 327 aa14.3□□□□□ -0.12
TRIM3-215ENST00000639856 ZNF182P17025 639 aaPredicted RBP14.3□□□□□ -0.12
TRIM3-215ENST00000639856 CDH12P55289 794 aa14.3□□□□□ -0.12
TRIM3-215ENST00000639856 EIF2B5Q13144 721 aaKnown RBP14.3□□□□□ -0.12
TRIM3-215ENST00000639856 NPTX1Q15818 432 aa14.3□□□□□ -0.12
TRIM3-215ENST00000639856 MICAQ29983 383 aa14.3□□□□□ -0.12
TRIM3-215ENST00000639856 SMYD1Q8NB12 490 aa14.3□□□□□ -0.12
TRIM3-215ENST00000639856 OR2L3Q8NG85 312 aa14.3□□□□□ -0.12
TRIM3-215ENST00000639856 SYNPO2LQ9H987 977 aa14.3□□□□□ -0.12
TRIM3-215ENST00000639856 RASSF1Q9NS23 344 aa14.3□□□□□ -0.12
TRIM3-215ENST00000639856 TRNAU1APQ9NX07 287 aaKnown RBP14.3□□□□□ -0.12
TRIM3-215ENST00000639856 C5AR2Q9P296 337 aa14.3□□□□□ -0.12
TRIM3-215ENST00000639856 SH3GLB1Q9Y371 365 aa14.3□□□□□ -0.12
TRIM3-215ENST00000639856 PCDHGA6Q9Y5G7 932 aa14.3□□□□□ -0.12
TRIM3-215ENST00000639856 PCDHGA10Q9Y5H3 936 aa14.3□□□□□ -0.12
TRIM3-215ENST00000639856 A8MVJ9 347 aa14.29□□□□□ -0.12
TRIM3-215ENST00000639856 HAT1O14929 419 aa14.29□□□□□ -0.12
TRIM3-215ENST00000639856 NDUFS2O75306 463 aa14.29□□□□□ -0.12
TRIM3-215ENST00000639856 THEGLP0DJG4 465 aa14.29□□□□□ -0.12
TRIM3-215ENST00000639856 BCL6P41182 706 aa14.29□□□□□ -0.12
TRIM3-215ENST00000639856 XCR1P46094 333 aa14.29□□□□□ -0.12
TRIM3-215ENST00000639856 FZD2Q14332 565 aa14.29□□□□□ -0.12
TRIM3-215ENST00000639856 SMN1Q16637 294 aaKnown RBP14.29□□□□□ -0.12
TRIM3-215ENST00000639856 CYP27C1Q4G0S4 372 aa14.29□□□□□ -0.12
TRIM3-215ENST00000639856 OR4C11Q6IEV9 310 aa14.29□□□□□ -0.12
TRIM3-215ENST00000639856 GPR153Q6NV75 609 aa14.29□□□□□ -0.12
TRIM3-215ENST00000639856 AMIGO1Q86WK6 493 aa14.29□□□□□ -0.12
TRIM3-215ENST00000639856 ENTHD1Q8IYW4 607 aa14.29□□□□□ -0.12
TRIM3-215ENST00000639856 SLC5A8Q8N695 610 aa14.29□□□□□ -0.12
TRIM3-215ENST00000639856 HORMAD2Q8N7B1 307 aa14.29□□□□□ -0.12
TRIM3-215ENST00000639856 ZNF540Q8NDQ6 660 aa14.29□□□□□ -0.12
TRIM3-215ENST00000639856 TTLQ8NG68 377 aa14.29□□□□□ -0.12
TRIM3-215ENST00000639856 OR52J3Q8NH60 311 aa14.29□□□□□ -0.12
TRIM3-215ENST00000639856 CREB3L4Q8TEY5 395 aa14.29□□□□□ -0.12
TRIM3-215ENST00000639856 UBE2FQ969M7 185 aa14.29□□□□□ -0.12
TRIM3-215ENST00000639856 ZBED6CLQ96FA7 236 aaPredicted RBP14.29□□□□□ -0.12
TRIM3-215ENST00000639856 SLC6A18Q96N87 628 aa14.29□□□□□ -0.12
TRIM3-215ENST00000639856 MACROD1Q9BQ69 325 aa14.29□□□□□ -0.12
TRIM3-215ENST00000639856 CCNB1IP1Q9NPC3 277 aa14.29□□□□□ -0.12
TRIM3-215ENST00000639856 A4GALTQ9NPC4 353 aa14.29□□□□□ -0.12
TRIM3-215ENST00000639856 SIRT3Q9NTG7 399 aaPredicted RBP14.29□□□□□ -0.12
TRIM3-215ENST00000639856 TEX10Q9NXF1 929 aaPredicted RBP14.29□□□□□ -0.12
TRIM3-215ENST00000639856 VCANP13611 3396 aa14.29□□□□□ -0.12
TRIM3-215ENST00000639856 A0A1W2PPC4 97 aa14.29□□□□□ -0.12
TRIM3-215ENST00000639856 TRBC2A0A5B9 178 aa14.29□□□□□ -0.12
TRIM3-215ENST00000639856 BTN3A3O00478 584 aa14.29□□□□□ -0.12
TRIM3-215ENST00000639856 PPM1DO15297 605 aa14.29□□□□□ -0.12
TRIM3-215ENST00000639856 MRPS14O60783 128 aaKnown RBP14.29□□□□□ -0.12
TRIM3-215ENST00000639856 WBP4O75554 376 aaKnown RBP14.29□□□□□ -0.12
TRIM3-215ENST00000639856 SERPIND1P05546 499 aa14.29□□□□□ -0.12
TRIM3-215ENST00000639856 CHRM5P08912 532 aaPredicted RBP14.29□□□□□ -0.12
TRIM3-215ENST00000639856 ACVR2AP27037 513 aa14.29□□□□□ -0.12
TRIM3-215ENST00000639856 KRT20P35900 424 aa14.29□□□□□ -0.12
TRIM3-215ENST00000639856 ENTPD1P49961 510 aa14.29□□□□□ -0.12
TRIM3-215ENST00000639856 HMGA2P52926 109 aa14.29□□□□□ -0.12
TRIM3-215ENST00000639856 RPS26P62854 115 aaKnown RBP14.29□□□□□ -0.12
TRIM3-215ENST00000639856 TRA2BP62995 288 aaKnown RBP14.29□□□□□ -0.12
TRIM3-215ENST00000639856 ILF3Q12906 894 aaKnown RBP eCLIP14.29□□□□□ -0.12
TRIM3-215ENST00000639856 HSPB3Q12988 150 aa14.29□□□□□ -0.12
TRIM3-215ENST00000639856 EXOC3L2Q2M3D2 409 aa14.29□□□□□ -0.12
TRIM3-215ENST00000639856 TNFAIP8L2Q6P589 184 aaPredicted RBP14.29□□□□□ -0.12
TRIM3-215ENST00000639856 SLC16A12Q6ZSM3 486 aa14.29□□□□□ -0.12
TRIM3-215ENST00000639856 ANKRD13BQ86YJ7 626 aa14.29□□□□□ -0.12
TRIM3-215ENST00000639856 LGI4Q8N135 537 aa14.29□□□□□ -0.12
TRIM3-215ENST00000639856 AMER3Q8N944 861 aa14.29□□□□□ -0.12
TRIM3-215ENST00000639856 TBC1D15Q8TC07 691 aa14.29□□□□□ -0.12
TRIM3-215ENST00000639856 SLC38A5Q8WUX1 472 aa14.29□□□□□ -0.12
TRIM3-215ENST00000639856 RORBQ92753 470 aa14.29□□□□□ -0.12
TRIM3-215ENST00000639856 EXOSC8Q96B26 276 aaKnown RBP14.29□□□□□ -0.12
TRIM3-215ENST00000639856 KCNC2Q96PR1 638 aa14.29□□□□□ -0.12
TRIM3-215ENST00000639856 PIP5K1AQ99755 562 aa14.29□□□□□ -0.12
TRIM3-215ENST00000639856 DPH7Q9BTV6 452 aa14.29□□□□□ -0.12
TRIM3-215ENST00000639856 AICDAQ9GZX7 198 aa14.29□□□□□ -0.12
TRIM3-215ENST00000639856 RLIMQ9NVW2 624 aa14.29□□□□□ -0.12
TRIM3-215ENST00000639856 ENPP5Q9UJA9 477 aa14.29□□□□□ -0.12
TRIM3-215ENST00000639856 POFUT2Q9Y2G5 429 aa14.29□□□□□ -0.12
TRIM3-215ENST00000639856 MRPS17Q9Y2R5 130 aaKnown RBP14.29□□□□□ -0.12
TRIM3-215ENST00000639856 ENPP4Q9Y6X5 453 aa14.29□□□□□ -0.12
TRIM3-215ENST00000639856 A0A0A6YYD5 115 aa14.28□□□□□ -0.12
TRIM3-215ENST00000639856 A0A0G2JN53 185 aa14.28□□□□□ -0.12
TRIM3-215ENST00000639856 SPTY2D1-AS1A0A0U1RR47 76 aa14.28□□□□□ -0.12
TRIM3-215ENST00000639856 LRIT2A6NDA9 550 aa14.28□□□□□ -0.12
TRIM3-215ENST00000639856 ISM1B1AKI9 464 aa14.28□□□□□ -0.12
TRIM3-215ENST00000639856 J3KTA2 159 aa14.28□□□□□ -0.12
TRIM3-215ENST00000639856 FAM20BO75063 409 aa14.28□□□□□ -0.12
TRIM3-215ENST00000639856 BCL10O95999 233 aa14.28□□□□□ -0.12
TRIM3-215ENST00000639856 TNFP01375 233 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms