RNA–Protein interactions for RNA: ENST00000639561.1

ATRIP-208, Transcript of ATR interacting protein, humanhuman

TSL 2

Gene ATRIP, Length 2,376 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-208ENST00000639561 CLEC3AO75596 197 aa13.12□□□□□ -0.31
ATRIP-208ENST00000639561 PROS1P07225 676 aa13.12□□□□□ -0.31
ATRIP-208ENST00000639561 FTH1P19P0C7X4 201 aa13.12□□□□□ -0.31
ATRIP-208ENST00000639561 AK4P27144 223 aaPredicted RBP13.12□□□□□ -0.31
ATRIP-208ENST00000639561 RPS26P62854 115 aaKnown RBP13.12□□□□□ -0.31
ATRIP-208ENST00000639561 SELENOWP63302 87 aa13.12□□□□□ -0.31
ATRIP-208ENST00000639561 CD47Q08722 323 aa13.12□□□□□ -0.31
ATRIP-208ENST00000639561 RBBP4Q09028 425 aa13.12□□□□□ -0.31
ATRIP-208ENST00000639561 LSAMPQ13449 338 aa13.12□□□□□ -0.31
ATRIP-208ENST00000639561 HEPACAMQ14CZ8 416 aa13.12□□□□□ -0.31
ATRIP-208ENST00000639561 MEP1AQ16819 746 aa13.12□□□□□ -0.31
ATRIP-208ENST00000639561 TRIM40Q6P9F5 258 aa13.12□□□□□ -0.31
ATRIP-208ENST00000639561 UNQ6494/PRO21346Q6UXR6 183 aa13.12□□□□□ -0.31
ATRIP-208ENST00000639561 ZNF793Q6ZN11 406 aa13.12□□□□□ -0.31
ATRIP-208ENST00000639561 IQCHQ86VS3 1027 aa13.12□□□□□ -0.31
ATRIP-208ENST00000639561 CHDHQ8NE62 594 aaPredicted RBP13.12□□□□□ -0.31
ATRIP-208ENST00000639561 PIK3C3Q8NEB9 887 aa13.12□□□□□ -0.31
ATRIP-208ENST00000639561 OR2L3Q8NG85 312 aa13.12□□□□□ -0.31
ATRIP-208ENST00000639561 CCL4L1Q8NHW4 92 aa13.12□□□□□ -0.31
ATRIP-208ENST00000639561 BAHD1Q8TBE0 780 aaPredicted RBP13.12□□□□□ -0.31
ATRIP-208ENST00000639561 KLHL31Q9H511 634 aa13.12□□□□□ -0.31
ATRIP-208ENST00000639561 DDX31Q9H8H2 851 aaKnown RBP13.12□□□□□ -0.31
ATRIP-208ENST00000639561 MRPS30Q9NP92 439 aaKnown RBP13.12□□□□□ -0.31
ATRIP-208ENST00000639561 EXD2Q9NVH0 621 aa13.12□□□□□ -0.31
ATRIP-208ENST00000639561 THUMPD1Q9NXG2 353 aaKnown RBP13.12□□□□□ -0.31
ATRIP-208ENST00000639561 PDP1Q9P0J1 537 aaPredicted RBP13.12□□□□□ -0.31
ATRIP-208ENST00000639561 BAG5Q9UL15 447 aa13.12□□□□□ -0.31
ATRIP-208ENST00000639561 PADI2Q9Y2J8 665 aa13.12□□□□□ -0.31
ATRIP-208ENST00000639561 AP1M2Q9Y6Q5 423 aa13.12□□□□□ -0.31
ATRIP-208ENST00000639561 ARHGEF17Q96PE2 2063 aaPredicted RBP13.12□□□□□ -0.31
ATRIP-208ENST00000639561 A0A0A6YYD5 115 aa13.12□□□□□ -0.31
ATRIP-208ENST00000639561 A0A1B0GTQ1 180 aa13.12□□□□□ -0.31
ATRIP-208ENST00000639561 A0A1W2PR77 199 aa13.12□□□□□ -0.31
ATRIP-208ENST00000639561 TRBC2A0A5B9 178 aa13.12□□□□□ -0.31
ATRIP-208ENST00000639561 PRAMEF25A6NGN4 478 aa13.12□□□□□ -0.31
ATRIP-208ENST00000639561 SLC16A6O15403 523 aa13.12□□□□□ -0.31
ATRIP-208ENST00000639561 HYAL3O43820 417 aaPredicted RBP13.12□□□□□ -0.31
ATRIP-208ENST00000639561 TBX19O60806 448 aa13.12□□□□□ -0.31
ATRIP-208ENST00000639561 UQCRC2P22695 453 aa13.12□□□□□ -0.31
ATRIP-208ENST00000639561 PRIM2P49643 509 aa13.12□□□□□ -0.31
ATRIP-208ENST00000639561 RAD23AP54725 363 aa13.12□□□□□ -0.31
ATRIP-208ENST00000639561 PCBP4P57723 403 aaKnown RBP13.12□□□□□ -0.31
ATRIP-208ENST00000639561 KIAA1024LP59773 190 aa13.12□□□□□ -0.31
ATRIP-208ENST00000639561 ISL1P61371 349 aa13.12□□□□□ -0.31
ATRIP-208ENST00000639561 CDK6Q00534 326 aa13.12□□□□□ -0.31
ATRIP-208ENST00000639561 HYAL2Q12891 473 aa13.12□□□□□ -0.31
ATRIP-208ENST00000639561 ZC3H12BQ5HYM0 836 aaKnown RBP13.12□□□□□ -0.31
ATRIP-208ENST00000639561 ZNF691Q5VV52 312 aa13.12□□□□□ -0.31
ATRIP-208ENST00000639561 B3GNT6Q6ZMB0 384 aa13.12□□□□□ -0.31
ATRIP-208ENST00000639561 ZFAND2BQ8WV99 257 aa13.12□□□□□ -0.31
ATRIP-208ENST00000639561 ASB12Q8WXK4 309 aa13.12□□□□□ -0.31
ATRIP-208ENST00000639561 ADAMTS14Q8WXS8 1223 aa13.12□□□□□ -0.31
ATRIP-208ENST00000639561 BMFQ96LC9 184 aa13.12□□□□□ -0.31
ATRIP-208ENST00000639561 ELF4Q99607 663 aaPredicted RBP13.12□□□□□ -0.31
ATRIP-208ENST00000639561 NDUFAF4Q9P032 175 aa13.12□□□□□ -0.31
ATRIP-208ENST00000639561 KLHL20Q9Y2M5 609 aa13.12□□□□□ -0.31
ATRIP-208ENST00000639561 WBP11Q9Y2W2 641 aaKnown RBP13.12□□□□□ -0.31
ATRIP-208ENST00000639561 KNL1Q8NG31 2342 aa13.11□□□□□ -0.31
ATRIP-208ENST00000639561 COL5A1P20908 1838 aaPredicted RBP13.11□□□□□ -0.31
ATRIP-208ENST00000639561 CCDC88CQ9P219 2028 aa13.11□□□□□ -0.31
ATRIP-208ENST00000639561 PDPK1O15530 556 aa13.11□□□□□ -0.31
ATRIP-208ENST00000639561 B4GALT2O60909 372 aa13.11□□□□□ -0.31
ATRIP-208ENST00000639561 CYP4B1P13584 511 aa13.11□□□□□ -0.31
ATRIP-208ENST00000639561 CRHBPP24387 322 aa13.11□□□□□ -0.31
ATRIP-208ENST00000639561 PCBP3P57721 371 aaKnown RBP13.11□□□□□ -0.31
ATRIP-208ENST00000639561 PMS2P3Q13401 168 aa13.11□□□□□ -0.31
ATRIP-208ENST00000639561 RFX4Q33E94 735 aa13.11□□□□□ -0.31
ATRIP-208ENST00000639561 OR4C11Q6IEV9 310 aa13.11□□□□□ -0.31
ATRIP-208ENST00000639561 ENPP7Q6UWV6 458 aa13.11□□□□□ -0.31
ATRIP-208ENST00000639561 KCTD8Q6ZWB6 473 aa13.11□□□□□ -0.31
ATRIP-208ENST00000639561 SPPL2AQ8TCT8 520 aa13.11□□□□□ -0.31
ATRIP-208ENST00000639561 TSACCQ96A04 125 aaPredicted RBP13.11□□□□□ -0.31
ATRIP-208ENST00000639561 EXOSC8Q96B26 276 aaKnown RBP13.11□□□□□ -0.31
ATRIP-208ENST00000639561 QRFPRQ96P65 431 aa13.11□□□□□ -0.31
ATRIP-208ENST00000639561 DPH7Q9BTV6 452 aa13.11□□□□□ -0.31
ATRIP-208ENST00000639561 REEP1Q9H902 201 aa13.11□□□□□ -0.31
ATRIP-208ENST00000639561 SIRT3Q9NTG7 399 aaPredicted RBP13.11□□□□□ -0.31
ATRIP-208ENST00000639561 RSL24D1Q9UHA3 163 aaKnown RBP13.11□□□□□ -0.31
ATRIP-208ENST00000639561 MSRB2Q9Y3D2 182 aa13.11□□□□□ -0.31
ATRIP-208ENST00000639561 WASHC1A8K0Z3 465 aa13.1□□□□□ -0.31
ATRIP-208ENST00000639561 PRAMEF26H0Y7S4 382 aa13.1□□□□□ -0.31
ATRIP-208ENST00000639561 M0QX08 132 aa13.1□□□□□ -0.31
ATRIP-208ENST00000639561 TLR4O00206 839 aa13.1□□□□□ -0.31
ATRIP-208ENST00000639561 DPM1O60762 260 aa13.1□□□□□ -0.31
ATRIP-208ENST00000639561 KRT75O95678 551 aa13.1□□□□□ -0.31
ATRIP-208ENST00000639561 WNT1P04628 370 aa13.1□□□□□ -0.31
ATRIP-208ENST00000639561 ARAFP10398 606 aa13.1□□□□□ -0.31
ATRIP-208ENST00000639561 ITGAMP11215 1152 aa13.1□□□□□ -0.31
ATRIP-208ENST00000639561 SPINK2P20155 84 aa13.1□□□□□ -0.31
ATRIP-208ENST00000639561 AGXTP21549 392 aa13.1□□□□□ -0.31
ATRIP-208ENST00000639561 EPHA2P29317 976 aa13.1□□□□□ -0.31
ATRIP-208ENST00000639561 FRKP42685 505 aaPredicted RBP13.1□□□□□ -0.31
ATRIP-208ENST00000639561 OR1E2P47887 323 aa13.1□□□□□ -0.31
ATRIP-208ENST00000639561 ARRB1P49407 418 aaPredicted RBP13.1□□□□□ -0.31
ATRIP-208ENST00000639561 CDK9P50750 372 aaKnown RBP13.1□□□□□ -0.31
ATRIP-208ENST00000639561 ARHGDIAP52565 204 aa13.1□□□□□ -0.31
ATRIP-208ENST00000639561 MANFP55145 182 aaKnown RBP13.1□□□□□ -0.31
ATRIP-208ENST00000639561 ROR2Q01974 943 aaKnown RBP13.1□□□□□ -0.31
ATRIP-208ENST00000639561 HSPB3Q12988 150 aa13.1□□□□□ -0.31
ATRIP-208ENST00000639561 RAPSNQ13702 412 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms