RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	TGM4	P49221	684 aa		10.27	□□□□□ -0.77
CHD2-223	ENST00000636306	GZMM	P51124	257 aa		10.27	□□□□□ -0.77
CHD2-223	ENST00000636306	ITGA1	P56199	1179 aa		10.27	□□□□□ -0.77
CHD2-223	ENST00000636306	TWF1	Q12792	350 aa		10.27	□□□□□ -0.77
CHD2-223	ENST00000636306	CAMK2D	Q13557	499 aa		10.27	□□□□□ -0.77
CHD2-223	ENST00000636306	KIAA0040	Q15053	153 aa		10.27	□□□□□ -0.77
CHD2-223	ENST00000636306	MED22	Q15528	200 aa		10.27	□□□□□ -0.77
CHD2-223	ENST00000636306	CDKL4	Q5MAI5	379 aa		10.27	□□□□□ -0.77
CHD2-223	ENST00000636306	HES5	Q5TA89	166 aa		10.27	□□□□□ -0.77
CHD2-223	ENST00000636306	RNLS	Q5VYX0	342 aa		10.27	□□□□□ -0.77
CHD2-223	ENST00000636306	RAB11FIP2	Q7L804	512 aa		10.27	□□□□□ -0.77
CHD2-223	ENST00000636306	JAZF1	Q86VZ6	243 aa		10.27	□□□□□ -0.77
CHD2-223	ENST00000636306		Q8N402	240 aa		10.27	□□□□□ -0.77
CHD2-223	ENST00000636306	CHCHD4	Q8N4Q1	142 aa		10.27	□□□□□ -0.77
CHD2-223	ENST00000636306	OR1M1	Q8NGA1	313 aa		10.27	□□□□□ -0.77
CHD2-223	ENST00000636306	OR4L1	Q8NH43	312 aa		10.27	□□□□□ -0.77
CHD2-223	ENST00000636306	NETO1	Q8TDF5	533 aa		10.27	□□□□□ -0.77
CHD2-223	ENST00000636306	ZNF689	Q96CS4	500 aa	Predicted RBP	10.27	□□□□□ -0.77
CHD2-223	ENST00000636306	C11orf24	Q96F05	449 aa	Predicted RBP	10.27	□□□□□ -0.77
CHD2-223	ENST00000636306	OR5M11	Q96RB7	305 aa		10.27	□□□□□ -0.77
CHD2-223	ENST00000636306	KCNA7	Q96RP8	456 aa		10.27	□□□□□ -0.77
CHD2-223	ENST00000636306	GFM1	Q96RP9	751 aa	Known RBP	10.27	□□□□□ -0.77
CHD2-223	ENST00000636306	TRIB3	Q96RU7	358 aa		10.27	□□□□□ -0.77
CHD2-223	ENST00000636306	MNT	Q99583	582 aa		10.27	□□□□□ -0.77
CHD2-223	ENST00000636306	VN1R3	Q9BXE9	311 aa		10.27	□□□□□ -0.77
CHD2-223	ENST00000636306	MS4A7	Q9GZW8	240 aa	Predicted RBP	10.27	□□□□□ -0.77
CHD2-223	ENST00000636306	CRISPLD2	Q9H0B8	497 aa		10.27	□□□□□ -0.77
CHD2-223	ENST00000636306	ZCCHC4	Q9H5U6	513 aa		10.27	□□□□□ -0.77
CHD2-223	ENST00000636306	C8orf33	Q9H7E9	229 aa	Predicted RBP	10.27	□□□□□ -0.77
CHD2-223	ENST00000636306	EQTN	Q9NQ60	294 aa		10.27	□□□□□ -0.77
CHD2-223	ENST00000636306	BABAM2	Q9NXR7	383 aa		10.27	□□□□□ -0.77
CHD2-223	ENST00000636306	ZNF226	Q9NYT6	803 aa		10.27	□□□□□ -0.77
CHD2-223	ENST00000636306	PLEKHB1	Q9UF11	243 aa	Predicted RBP	10.27	□□□□□ -0.77
CHD2-223	ENST00000636306	RPS6KA6	Q9UK32	745 aa		10.27	□□□□□ -0.77
CHD2-223	ENST00000636306	SAMHD1	Q9Y3Z3	626 aa	Known RBP	10.27	□□□□□ -0.77
CHD2-223	ENST00000636306	SLC28A1	O00337	649 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	WNT9A	O14904	365 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	CASC3	O15234	703 aa	Known RBP	10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	NUPL2	O15504	423 aa	Known RBP	10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	MLYCD	O95822	493 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	S1PR4	O95977	384 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	GLUD1	P00367	558 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	CFD	P00746	253 aa	Predicted RBP	10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	IRF1	P10914	325 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	LPO	P22079	712 aa	Predicted RBP	10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	FDXR	P22570	491 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	PSMA3	P25788	255 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	POU1F1	P28069	291 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	CD96	P40200	585 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	CSK	P41240	450 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	STAR	P49675	285 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	SUOX	P51687	545 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	ZNF140	P52738	457 aa	Predicted RBP	10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	STC1	P52823	247 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	CRISP3	P54108	245 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	PSMD4	P55036	377 aa	Known RBP	10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	AP1S1	P61966	158 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	RPS24	P62847	133 aa	Known RBP	10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	SMAD3	P84022	425 aa	Known RBP	10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	PLA1A	Q53H76	456 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	RNF219	Q5W0B1	726 aa	Predicted RBP	10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	PLAG1	Q6DJT9	500 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	C5orf46	Q6UWT4	87 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	C3P1	Q6ZMU1	363 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	SHF	Q7M4L6	423 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	GLCCI1	Q86VQ1	547 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	UBE2J2	Q8N2K1	259 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	DCAF4L2	Q8NA75	395 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	OR4A15	Q8NGL6	344 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	TMEM163	Q8TC26	289 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	MRPS31	Q92665	395 aa	Known RBP	10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	FAM120B	Q96EK7	910 aa	Known RBP	10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	C19orf43	Q9BQ61	176 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	H2AFJ	Q9BTM1	129 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	RBCK1	Q9BYM8	510 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	BCL2L14	Q9BZR8	327 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	SIRT5	Q9NXA8	310 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	PPP1R14D	Q9NXH3	145 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	HCN3	Q9P1Z3	774 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	POMT2	Q9UKY4	750 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	MRPL42	Q9Y6G3	142 aa	Known RBP	10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	TRBV5-3	A0A0A0MS03	114 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306		A0A0D9SEW6	157 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	CXorf51A	A0A1B0GTR3	108 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	WRB	O00258	174 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	PDCD5	O14737	125 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	LZTS3	O60299	673 aa	Predicted RBP	10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	NDUFS3	O75489	264 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	CDRT1	O95170	752 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	S100A8	P05109	93 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	CR2	P20023	1033 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	SLC6A1	P30531	599 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	CAPZA2	P47755	286 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	KCNJ5	P48544	419 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	TTPA	P49638	278 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	DHODH	Q02127	395 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	ABHD18	Q0P651	414 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	CDH18	Q13634	790 aa		10.26	□□□□□ -0.77
CHD2-223	ENST00000636306	OPCML	Q14982	345 aa		10.26	□□□□□ -0.77

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