RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 SLC36A3Q495N2 470 aa15.41■□□□□ 0.06
CLN5-208ENST00000636183 RTP2Q5QGT7 225 aa15.41■□□□□ 0.06
CLN5-208ENST00000636183 DOHHQ9BU89 302 aa15.41■□□□□ 0.06
CLN5-208ENST00000636183 EHD1Q9H4M9 534 aa15.41■□□□□ 0.06
CLN5-208ENST00000636183 SOX17Q9H6I2 414 aaPredicted RBP15.41■□□□□ 0.06
CLN5-208ENST00000636183 MED11Q9P086 117 aa15.41■□□□□ 0.06
CLN5-208ENST00000636183 FXYD6-FXYD2A0A087WZ82 144 aa15.41■□□□□ 0.06
CLN5-208ENST00000636183 A8MT66 165 aa15.41■□□□□ 0.06
CLN5-208ENST00000636183 ALDOAP04075 364 aaKnown RBP15.41■□□□□ 0.06
CLN5-208ENST00000636183 TBPL1P62380 186 aa15.41■□□□□ 0.06
CLN5-208ENST00000636183 CRYZQ08257 329 aaKnown RBP15.41■□□□□ 0.06
CLN5-208ENST00000636183 SEC23BQ15437 767 aa15.41■□□□□ 0.06
CLN5-208ENST00000636183 LTC4SQ16873 150 aa15.41■□□□□ 0.06
CLN5-208ENST00000636183 ACSBG2Q5FVE4 666 aa15.41■□□□□ 0.06
CLN5-208ENST00000636183 ENPP6Q6UWR7 440 aa15.41■□□□□ 0.06
CLN5-208ENST00000636183 MRPL21Q7Z2W9 205 aaKnown RBP15.41■□□□□ 0.06
CLN5-208ENST00000636183 GRAMD2AQ8IUY3 354 aa15.41■□□□□ 0.06
CLN5-208ENST00000636183 SLC29A3Q9BZD2 475 aa15.41■□□□□ 0.06
CLN5-208ENST00000636183 FXYD6Q9H0Q3 95 aa15.41■□□□□ 0.06
CLN5-208ENST00000636183 HIF3AQ9Y2N7 669 aa15.41■□□□□ 0.06
CLN5-208ENST00000636183 CHRM1P11229 460 aaPredicted RBP15.41■□□□□ 0.06
CLN5-208ENST00000636183 TIMP2P16035 220 aa15.41■□□□□ 0.06
CLN5-208ENST00000636183 S100A2P29034 98 aa15.41■□□□□ 0.06
CLN5-208ENST00000636183 AGTR2P50052 363 aa15.41■□□□□ 0.06
CLN5-208ENST00000636183 BLMHQ13867 455 aa15.41■□□□□ 0.06
CLN5-208ENST00000636183 NFE2L1Q14494 772 aa15.41■□□□□ 0.06
CLN5-208ENST00000636183 LINC00597Q9H2U6 94 aa15.41■□□□□ 0.06
CLN5-208ENST00000636183 TMEM233B4DJY2 109 aa15.41■□□□□ 0.06
CLN5-208ENST00000636183 ORC5O43913 435 aa15.41■□□□□ 0.06
CLN5-208ENST00000636183 IL1R2P27930 398 aa15.41■□□□□ 0.06
CLN5-208ENST00000636183 NKPD1Q17RQ9 610 aa15.41■□□□□ 0.06
CLN5-208ENST00000636183 DMRTB1Q96MA1 342 aa15.41■□□□□ 0.06
CLN5-208ENST00000636183 PCDHAC1Q9H158 963 aa15.41■□□□□ 0.06
CLN5-208ENST00000636183 TMEM184CQ9NVA4 438 aa15.41■□□□□ 0.06
CLN5-208ENST00000636183 COQ3Q9NZJ6 369 aa15.41■□□□□ 0.06
CLN5-208ENST00000636183 KCPQ6ZWJ8 1503 aa15.41■□□□□ 0.06
CLN5-208ENST00000636183 ADAMTS4O75173 837 aa15.41■□□□□ 0.06
CLN5-208ENST00000636183 LCATP04180 440 aa15.41■□□□□ 0.06
CLN5-208ENST00000636183 C1GALT1C1LP0DN25 315 aa15.41■□□□□ 0.06
CLN5-208ENST00000636183 CTSAP10619 480 aa15.41■□□□□ 0.06
CLN5-208ENST00000636183 PCSK2P16519 638 aa15.41■□□□□ 0.06
CLN5-208ENST00000636183 DPP6P42658 865 aa15.41■□□□□ 0.06
CLN5-208ENST00000636183 TNFRSF4P43489 277 aa15.41■□□□□ 0.06
CLN5-208ENST00000636183 TRAM2Q15035 370 aa15.41■□□□□ 0.06
CLN5-208ENST00000636183 QPCTQ16769 361 aa15.41■□□□□ 0.06
CLN5-208ENST00000636183 LIN52Q52LA3 116 aa15.41■□□□□ 0.06
CLN5-208ENST00000636183 FRMD7Q6ZUT3 714 aa15.41■□□□□ 0.06
CLN5-208ENST00000636183 TMEM109Q9BVC6 243 aa15.41■□□□□ 0.06
CLN5-208ENST00000636183 REEP4Q9H6H4 257 aa15.41■□□□□ 0.06
CLN5-208ENST00000636183 GPR160Q9UJ42 338 aa15.41■□□□□ 0.06
CLN5-208ENST00000636183 CREB1P16220 341 aa15.41■□□□□ 0.06
CLN5-208ENST00000636183 PORP16435 677 aaPredicted RBP15.41■□□□□ 0.06
CLN5-208ENST00000636183 UQCRC2P22695 453 aa15.41■□□□□ 0.06
CLN5-208ENST00000636183 ACRV1P26436 265 aa15.41■□□□□ 0.06
CLN5-208ENST00000636183 RPL11P62913 178 aaKnown RBP15.41■□□□□ 0.06
CLN5-208ENST00000636183 USP43Q70EL4 1123 aa15.41■□□□□ 0.06
CLN5-208ENST00000636183 MOAP1Q96BY2 351 aa15.41■□□□□ 0.06
CLN5-208ENST00000636183 TPT1P8Q9HAU6 139 aa15.41■□□□□ 0.06
CLN5-208ENST00000636183 TREM1Q9NP99 234 aa15.41■□□□□ 0.06
CLN5-208ENST00000636183 RAB21Q9UL25 225 aa15.41■□□□□ 0.06
CLN5-208ENST00000636183 BTBD17A6NE02 478 aa15.4■□□□□ 0.06
CLN5-208ENST00000636183 G6PDP11413 515 aa15.4■□□□□ 0.06
CLN5-208ENST00000636183 BMP6P22004 513 aa15.4■□□□□ 0.06
CLN5-208ENST00000636183 MAPK3P27361 379 aaPredicted RBP15.4■□□□□ 0.06
CLN5-208ENST00000636183 KCTD18Q6PI47 426 aaPredicted RBP15.4■□□□□ 0.06
CLN5-208ENST00000636183 HAGHLQ6PII5 290 aaPredicted RBP15.4■□□□□ 0.06
CLN5-208ENST00000636183 NPRL2Q8WTW4 380 aa15.4■□□□□ 0.06
CLN5-208ENST00000636183 OBP2BQ9NPH6 170 aa15.4■□□□□ 0.06
CLN5-208ENST00000636183 PCDH10Q9P2E7 1040 aa15.4■□□□□ 0.06
CLN5-208ENST00000636183 PRKD3O94806 890 aa15.4■□□□□ 0.06
CLN5-208ENST00000636183 ENDOUP21128 410 aaKnown RBP15.4■□□□□ 0.06
CLN5-208ENST00000636183 CD6P30203 668 aa15.4■□□□□ 0.06
CLN5-208ENST00000636183 GRHL2Q6ISB3 625 aa15.4■□□□□ 0.06
CLN5-208ENST00000636183 TMEM53Q6P2H8 277 aa15.4■□□□□ 0.06
CLN5-208ENST00000636183 OR8H3Q8N146 312 aa15.4■□□□□ 0.06
CLN5-208ENST00000636183 OR56A3Q8NH54 315 aa15.4■□□□□ 0.06
CLN5-208ENST00000636183 METTL2AQ96IZ6 378 aaKnown RBP15.4■□□□□ 0.06
CLN5-208ENST00000636183 PAAF1Q9BRP4 392 aa15.4■□□□□ 0.06
CLN5-208ENST00000636183 MND1Q9BWT6 205 aa15.4■□□□□ 0.06
CLN5-208ENST00000636183 NSG1A0A0A6YYJ2 146 aa15.4■□□□□ 0.06
CLN5-208ENST00000636183 SIRPAP78324 504 aa15.4■□□□□ 0.06
CLN5-208ENST00000636183 DEFB103AP81534 67 aa15.4■□□□□ 0.06
CLN5-208ENST00000636183 C3orf49Q96BT1 292 aa15.4■□□□□ 0.06
CLN5-208ENST00000636183 LRIG1Q96JA1 1093 aa15.4■□□□□ 0.06
CLN5-208ENST00000636183 B3GNT2Q9NY97 397 aa15.4■□□□□ 0.06
CLN5-208ENST00000636183 A0A087WUU8 490 aa15.4■□□□□ 0.06
CLN5-208ENST00000636183 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.4■□□□□ 0.06
CLN5-208ENST00000636183 TNFSF12O43508 249 aa15.4■□□□□ 0.06
CLN5-208ENST00000636183 HRH2P25021 359 aa15.4■□□□□ 0.06
CLN5-208ENST00000636183 S100A16Q96FQ6 103 aaKnown RBP15.4■□□□□ 0.06
CLN5-208ENST00000636183 C7orf26Q96N11 449 aa15.4■□□□□ 0.06
CLN5-208ENST00000636183 NXF5Q9H1B4 397 aaKnown RBP15.4■□□□□ 0.06
CLN5-208ENST00000636183 DECR2Q9NUI1 292 aa15.4■□□□□ 0.06
CLN5-208ENST00000636183 ABRACLQ9P1F3 81 aa15.4■□□□□ 0.06
CLN5-208ENST00000636183 TCRBV7S3A2A0A539 114 aa15.4■□□□□ 0.06
CLN5-208ENST00000636183 ZNF840PA6NDX5 716 aa15.4■□□□□ 0.06
CLN5-208ENST00000636183 SLC2A2P11168 524 aaPredicted RBP15.4■□□□□ 0.06
CLN5-208ENST00000636183 JAM2P57087 298 aa15.4■□□□□ 0.06
CLN5-208ENST00000636183 TYSND1Q2T9J0 566 aa15.4■□□□□ 0.06
CLN5-208ENST00000636183 TRIM61Q5EBN2 209 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms