RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 B3GALT1Q9Y5Z6 326 aa5.34□□□□□ -1.56
SCN1A-209ENST00000635750 CCDC88CQ9P219 2028 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 LOXHD1Q8IVV2 1947 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 TLX2O43763 284 aaPredicted RBP5.33□□□□□ -1.56
SCN1A-209ENST00000635750 SHOX2O60902 331 aaPredicted RBP5.33□□□□□ -1.56
SCN1A-209ENST00000635750 PAX7P23759 505 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 RPL11P62913 178 aaKnown RBP5.33□□□□□ -1.56
SCN1A-209ENST00000635750 TUBA1BP68363 451 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 PDE7AQ13946 482 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 ADGRE1Q14246 886 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 GRIN2CQ14957 1233 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 KCTD19Q17RG1 926 aaPredicted RBP5.33□□□□□ -1.56
SCN1A-209ENST00000635750 TCTE1Q5JU00 501 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 AWAT2Q6E213 333 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 REEP3Q6NUK4 255 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 NIPAL3Q6P499 406 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 ZNF517Q6ZMY9 492 aaPredicted RBP5.33□□□□□ -1.56
SCN1A-209ENST00000635750 TUBA1AQ71U36 451 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 PRELID2Q8N945 189 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 OR2T33Q8NG76 320 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 OR4K15Q8NH41 348 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 RSC1A1Q92681 617 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 BARD1Q99728 777 aaKnown RBP5.33□□□□□ -1.56
SCN1A-209ENST00000635750 HERPUD2Q9BSE4 406 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 POTEKPQ9BYX7 375 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 ENKD1Q9H0I2 346 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 ZIM2Q9NZV7 527 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 MGAT4BQ9UQ53 548 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 TMEM184BQ9Y519 407 aaPredicted RBP5.33□□□□□ -1.56
SCN1A-209ENST00000635750 A0A0A6YYH2 397 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 A6NJ64 397 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 FAM155BO75949 473 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 C4BPAP04003 597 aaKnown RBP5.33□□□□□ -1.56
SCN1A-209ENST00000635750 SERPINA7P05543 415 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 CFHP08603 1231 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 CD46P15529 392 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 EEF1A1P68104 462 aaKnown RBP5.33□□□□□ -1.56
SCN1A-209ENST00000635750 HABP2Q14520 560 aaPredicted RBP5.33□□□□□ -1.56
SCN1A-209ENST00000635750 C3orf38Q5JPI3 329 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 SIRPB2Q5JXA9 342 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 SH3PXD2AQ5TCZ1 1133 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 EEF1A1P5Q5VTE0 462 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 DRICH1Q6PGQ1 229 aaPredicted RBP5.33□□□□□ -1.56
SCN1A-209ENST00000635750 NUP43Q8NFH3 380 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 JOSD2Q8TAC2 188 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 JPH3Q8WXH2 748 aaPredicted RBP5.33□□□□□ -1.56
SCN1A-209ENST00000635750 FAM46BQ96A09 425 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 SUSD3Q96L08 255 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 ITPAQ9BY32 194 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 WDR6Q9NNW5 1121 aaKnown RBP5.33□□□□□ -1.56
SCN1A-209ENST00000635750 CD320Q9NPF0 282 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 CUTCQ9NTM9 273 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 SLC39A1Q9NY26 324 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 CAMK2AQ9UQM7 478 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 CEP170BQ9Y4F5 1589 aaPredicted RBP5.33□□□□□ -1.56
SCN1A-209ENST00000635750 FUOMA2VDF0 154 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 TOR1AO14656 332 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 UGT1A9O60656 530 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 PIAS1O75925 651 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 CDRT1O95170 752 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 UGT1A6P19224 532 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 TAS2R20P59543 309 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 RAB8AP61006 207 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 ACY1Q03154 408 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 SLAMF1Q13291 335 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 UGCGQ16739 394 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 LRRC37A5PQ49AS3 106 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 PLEKHS1Q5SXH7 462 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 KIAA0930Q6ICG6 404 aaPredicted RBP5.33□□□□□ -1.56
SCN1A-209ENST00000635750 FAM83HQ6ZRV2 1179 aaPredicted RBP5.33□□□□□ -1.56
SCN1A-209ENST00000635750 GATSQ8NAP1 163 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 AUTS2Q8WXX7 1259 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 C7orf26Q96N11 449 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 CDK15Q96Q40 435 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 WACQ9BTA9 647 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 UGT1A7Q9HAW7 530 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 UGT1A10Q9HAW8 530 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 UGT1A8Q9HAW9 530 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 ARNT2Q9HBZ2 717 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 SERTAD4Q9NUC0 356 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 SLC6A14Q9UN76 642 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 MAB21L2Q9Y586 359 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 KIF1AQ12756 1690 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 LOC100130705A0A1B0GUX0 176 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 A8MVM7 634 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 E9PI62 339 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 SOCS5O75159 536 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 TSPAN15O95858 294 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 TGM6O95932 706 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 ASGR2P07307 311 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 PORP16435 677 aaPredicted RBP5.33□□□□□ -1.56
SCN1A-209ENST00000635750 IDH3AP50213 366 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 CCNHP51946 323 aaPredicted RBP5.33□□□□□ -1.56
SCN1A-209ENST00000635750 ID2Q02363 134 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 ZNF460Q14592 562 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 CCNJQ5T5M9 372 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 MEDAGQ5VYS4 303 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 TMEM214Q6NUQ4 689 aaKnown RBP5.33□□□□□ -1.56
SCN1A-209ENST00000635750 TMEM71Q6P5X7 295 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 ENPP6Q6UWR7 440 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms