RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, human

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC42BPB-209	ENST00000634889	PSME2	Q9UL46	239 aa		13.77	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	WBP11	Q9Y2W2	641 aa	Known RBP	13.77	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	TMED5	Q9Y3A6	229 aa		13.77	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	RAP2C	Q9Y3L5	183 aa		13.77	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	PTGDR2	Q9Y5Y4	395 aa		13.77	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	ATRX	P46100	2492 aa		13.76	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	BSN	Q9UPA5	3926 aa		13.76	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	C17orf105	B2RV13	164 aa		13.76	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	CDK2AP1	O14519	115 aa		13.76	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	LSM1	O15116	133 aa	Known RBP	13.76	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	SEC22B	O75396	215 aa		13.76	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	LYPLA1	O75608	230 aa	Predicted RBP	13.76	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	SLC35E2	P0CK97	266 aa		13.76	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	TNNI3	P19429	210 aa		13.76	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	GPR143	P51810	404 aa		13.76	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	SPRED3	Q2MJR0	410 aa		13.76	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	XKR7	Q5GH72	579 aa		13.76	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	ABHD17B	Q5VST6	288 aa		13.76	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	NOXRED1	Q6NXP6	359 aa		13.76	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	IKBIP	Q70UQ0	350 aa		13.76	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	PTRH1	Q86Y79	214 aa	Known RBP	13.76	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	ARMC10	Q8N2F6	343 aa		13.76	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	MGARP	Q8TDB4	240 aa		13.76	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	C16orf78	Q8WTQ4	265 aa		13.76	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	ART5	Q96L15	291 aa		13.76	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	ZNF354B	Q96LW1	612 aa		13.76	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	PPP3R2	Q96LZ3	170 aa		13.76	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	SORT1	Q99523	831 aa		13.76	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	EBPL	Q9BY08	206 aa		13.76	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	C20orf27	Q9GZN8	174 aa		13.76	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	ZBTB20	Q9HC78	741 aa	Predicted RBP	13.76	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	MYNN	Q9NPC7	610 aa		13.76	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	EHD3	Q9NZN3	535 aa		13.76	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	DLGAP4	Q9Y2H0	992 aa		13.76	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	HEMK1	Q9Y5R4	338 aa	Predicted RBP	13.76	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	SMG1	Q96Q15	3661 aa	Known RBP	13.76	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	DYTN	A2CJ06	578 aa		13.75	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	WASHC1	A8K0Z3	465 aa		13.75	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	OR10H2	O60403	315 aa		13.75	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	SASH3	O75995	380 aa		13.75	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	DDAH2	O95865	285 aa		13.75	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	IL3	P08700	152 aa		13.75	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	ALDH9A1	P49189	494 aa		13.75	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	RPL14	P50914	215 aa	Known RBP	13.75	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	BST1	Q10588	318 aa		13.75	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	MEP1A	Q16819	746 aa		13.75	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	ACER2	Q5QJU3	275 aa		13.75	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	ATG16L1	Q676U5	607 aa		13.75	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	B3GNTL1	Q67FW5	361 aa	Predicted RBP	13.75	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	LINC00696	Q6ZRV3	163 aa		13.75	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	SAMD14	Q8IZD0	417 aa	Predicted RBP	13.75	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	KIF2B	Q8N4N8	673 aa		13.75	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	RBMXL3	Q8N7X1	1067 aa	Known RBP	13.75	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	ZNF781	Q8N8C0	355 aa		13.75	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	OR1N1	Q8NGS0	311 aa		13.75	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	OR8K3	Q8NH51	312 aa		13.75	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	SLC2A12	Q8TD20	617 aa		13.75	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	HAS2	Q92819	552 aa		13.75	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	UCN3	Q969E3	161 aa		13.75	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	NCLN	Q969V3	563 aa		13.75	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	PNPLA2	Q96AD5	504 aa		13.75	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	C19orf60	Q96EN9	201 aa		13.75	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	FBXL20	Q96IG2	436 aa		13.75	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	FCRL1	Q96LA6	429 aa		13.75	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	THAP1	Q9NVV9	213 aa		13.75	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	STMN3	Q9NZ72	180 aa		13.75	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	ABI3	Q9P2A4	366 aa		13.75	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	COPS7A	Q9UBW8	275 aa		13.75	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	CES1P1	Q9UKY3	287 aa		13.75	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	B3GNT3	Q9Y2A9	372 aa		13.75	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	POLR3H	Q9Y535	204 aa	Predicted RBP	13.75	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	TLN1	Q9Y490	2541 aa	Known RBP	13.74	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	COL6A6	A6NMZ7	2263 aa		13.74	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	UQCRHL	A0A096LP55	91 aa		13.74	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	TRBV11-1	A0A0K0K1C0	115 aa		13.74	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	MYOCOS	A0A1B0GUC4	107 aa		13.74	□□□□□ -0.21
CDC42BPB-209	ENST00000634889		A8MUI8	341 aa		13.74	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	KLF11	O14901	512 aa		13.74	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	SUV39H1	O43463	412 aa		13.74	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	SNN	O75324	88 aa	Predicted RBP	13.74	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	SKAP2	O75563	359 aa	Predicted RBP	13.74	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	ATP1B1	P05026	303 aa		13.74	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	CPM	P14384	443 aa		13.74	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	POR	P16435	677 aa	Predicted RBP	13.74	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	CSNK2A2	P19784	350 aa	Predicted RBP	13.74	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	DDC	P20711	480 aa		13.74	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	CD97	P48960	835 aa		13.74	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	XK	P51811	444 aa		13.74	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	RFTN2	Q52LD8	501 aa	Predicted RBP	13.74	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	SLC6A19	Q695T7	634 aa		13.74	□□□□□ -0.21
CDC42BPB-209	ENST00000634889		Q6ZS92	163 aa		13.74	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	CRLF3	Q8IUI8	442 aa		13.74	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	MMP21	Q8N119	569 aa		13.74	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	AMER2	Q8N7J2	671 aa		13.74	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	RIT1	Q92963	219 aa		13.74	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	PPWD1	Q96BP3	646 aa	Known RBP	13.74	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	KLHL29	Q96CT2	875 aa		13.74	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	DEFB126	Q9BYW3	111 aa		13.74	□□□□□ -0.21
CDC42BPB-209	ENST00000634889	OR8D2	Q9GZM6	311 aa		13.74	□□□□□ -0.21

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