RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 BTN3A3O00478 584 aa18.66■□□□□ 0.58
PCDHB11-202ENST00000624887 PRKRAO75569 313 aaKnown RBP18.66■□□□□ 0.58
PCDHB11-202ENST00000624887 MFN2O95140 757 aa18.66■□□□□ 0.58
PCDHB11-202ENST00000624887 GABRG2P18507 467 aa18.66■□□□□ 0.58
PCDHB11-202ENST00000624887 ITIH1P19827 911 aa18.66■□□□□ 0.58
PCDHB11-202ENST00000624887 CD247P20963 164 aa18.66■□□□□ 0.58
PCDHB11-202ENST00000624887 SLC19A1P41440 591 aa18.66■□□□□ 0.58
PCDHB11-202ENST00000624887 NCBP2P52298 156 aaKnown RBP eCLIP18.66■□□□□ 0.58
PCDHB11-202ENST00000624887 STXBP1P61764 594 aaKnown RBP18.66■□□□□ 0.58
PCDHB11-202ENST00000624887 YPEL5P62699 121 aa18.66■□□□□ 0.58
PCDHB11-202ENST00000624887 PUM1Q14671 1186 aaKnown RBP eCLIP18.66■□□□□ 0.58
PCDHB11-202ENST00000624887 PROX2Q3B8N5 592 aa18.66■□□□□ 0.58
PCDHB11-202ENST00000624887 FBXO43Q4G163 708 aa18.66■□□□□ 0.58
PCDHB11-202ENST00000624887 TMEM31Q5JXX7 168 aa18.66■□□□□ 0.58
PCDHB11-202ENST00000624887 SLC44A3Q8N4M1 653 aa18.66■□□□□ 0.58
PCDHB11-202ENST00000624887 MUL1Q969V5 352 aa18.66■□□□□ 0.58
PCDHB11-202ENST00000624887 SLC22A18Q96BI1 424 aa18.66■□□□□ 0.58
PCDHB11-202ENST00000624887 BBS4Q96RK4 519 aa18.66■□□□□ 0.58
PCDHB11-202ENST00000624887 PSD2Q9BQI7 771 aa18.66■□□□□ 0.58
PCDHB11-202ENST00000624887 SRMSQ9H3Y6 488 aa18.66■□□□□ 0.58
PCDHB11-202ENST00000624887 SCN3BQ9NY72 215 aa18.66■□□□□ 0.58
PCDHB11-202ENST00000624887 MMP17Q9ULZ9 603 aa18.66■□□□□ 0.58
PCDHB11-202ENST00000624887 POFUT2Q9Y2G5 429 aa18.66■□□□□ 0.58
PCDHB11-202ENST00000624887 GOLGA4Q13439 2230 aaKnown RBP18.66■□□□□ 0.58
PCDHB11-202ENST00000624887 BRWD1Q9NSI6 2320 aa18.65■□□□□ 0.58
PCDHB11-202ENST00000624887 EYSQ5T1H1 3165 aa18.65■□□□□ 0.58
PCDHB11-202ENST00000624887 GLOD5A6NK44 160 aa18.65■□□□□ 0.58
PCDHB11-202ENST00000624887 C2CD4DB7Z1M9 353 aa18.65■□□□□ 0.58
PCDHB11-202ENST00000624887 PGRMC2O15173 223 aa18.65■□□□□ 0.58
PCDHB11-202ENST00000624887 RASGRP1O95267 797 aa18.65■□□□□ 0.58
PCDHB11-202ENST00000624887 CD72P21854 359 aa18.65■□□□□ 0.58
PCDHB11-202ENST00000624887 AKT2P31751 481 aa18.65■□□□□ 0.58
PCDHB11-202ENST00000624887 SRP54P61011 504 aaKnown RBP18.65■□□□□ 0.58
PCDHB11-202ENST00000624887 SLC35A2P78381 396 aa18.65■□□□□ 0.58
PCDHB11-202ENST00000624887 TJAP1Q5JTD0 557 aa18.65■□□□□ 0.58
PCDHB11-202ENST00000624887 TMEM64Q6YI46 380 aa18.65■□□□□ 0.58
PCDHB11-202ENST00000624887 SLC44A2Q8IWA5 706 aaPredicted RBP18.65■□□□□ 0.58
PCDHB11-202ENST00000624887 ITFG2Q969R8 447 aa18.65■□□□□ 0.58
PCDHB11-202ENST00000624887 SLC35G5Q96KT7 338 aa18.65■□□□□ 0.58
PCDHB11-202ENST00000624887 GAS2L1Q99501 681 aaPredicted RBP18.65■□□□□ 0.58
PCDHB11-202ENST00000624887 TWSG1Q9GZX9 223 aa18.65■□□□□ 0.58
PCDHB11-202ENST00000624887 KCNK12Q9HB15 430 aa18.65■□□□□ 0.58
PCDHB11-202ENST00000624887 RLIMQ9NVW2 624 aa18.65■□□□□ 0.58
PCDHB11-202ENST00000624887 AASSQ9UDR5 926 aa18.65■□□□□ 0.58
PCDHB11-202ENST00000624887 PCDHGA6Q9Y5G7 932 aa18.65■□□□□ 0.58
PCDHB11-202ENST00000624887 CCDC88CQ9P219 2028 aa18.65■□□□□ 0.58
PCDHB11-202ENST00000624887 NOL3O60936 208 aaKnown RBP18.64■□□□□ 0.58
PCDHB11-202ENST00000624887 AIFM1O95831 613 aa18.64■□□□□ 0.58
PCDHB11-202ENST00000624887 ASGR2P07307 311 aa18.64■□□□□ 0.58
PCDHB11-202ENST00000624887 F3P13726 295 aa18.64■□□□□ 0.58
PCDHB11-202ENST00000624887 CERS1P27544 350 aa18.64■□□□□ 0.58
PCDHB11-202ENST00000624887 MAGEA8P43361 318 aa18.64■□□□□ 0.58
PCDHB11-202ENST00000624887 RGS19P49795 217 aa18.64■□□□□ 0.58
PCDHB11-202ENST00000624887 RPS15AP62244 130 aaKnown RBP18.64■□□□□ 0.58
PCDHB11-202ENST00000624887 TFF2Q03403 129 aa18.64■□□□□ 0.58
PCDHB11-202ENST00000624887 ALG11Q2TAA5 492 aa18.64■□□□□ 0.58
PCDHB11-202ENST00000624887 GPR153Q6NV75 609 aa18.64■□□□□ 0.58
PCDHB11-202ENST00000624887 GPR32P1Q8NGA4 272 aa18.64■□□□□ 0.58
PCDHB11-202ENST00000624887 CCDC90BQ9GZT6 254 aa18.64■□□□□ 0.58
PCDHB11-202ENST00000624887 ZCCHC3Q9NUD5 404 aaKnown RBP18.64■□□□□ 0.58
PCDHB11-202ENST00000624887 TRNAU1APQ9NX07 287 aaKnown RBP18.64■□□□□ 0.58
PCDHB11-202ENST00000624887 P2RX2Q9UBL9 471 aa18.64■□□□□ 0.58
PCDHB11-202ENST00000624887 KCND3Q9UK17 655 aa18.64■□□□□ 0.58
PCDHB11-202ENST00000624887 FBXW2Q9UKT8 454 aa18.64■□□□□ 0.58
PCDHB11-202ENST00000624887 CES1P1Q9UKY3 287 aa18.64■□□□□ 0.58
PCDHB11-202ENST00000624887 TMEM247A6NEH6 219 aa18.64■□□□□ 0.57
PCDHB11-202ENST00000624887 ZW10O43264 779 aa18.64■□□□□ 0.57
PCDHB11-202ENST00000624887 PCDHGA12O60330 932 aa18.64■□□□□ 0.57
PCDHB11-202ENST00000624887 ERAL1O75616 437 aaKnown RBP18.64■□□□□ 0.57
PCDHB11-202ENST00000624887 GADD45GO95257 159 aa18.64■□□□□ 0.57
PCDHB11-202ENST00000624887 RAB8AP61006 207 aa18.64■□□□□ 0.57
PCDHB11-202ENST00000624887 TGM3Q08188 693 aa18.64■□□□□ 0.57
PCDHB11-202ENST00000624887 CCINQ13939 588 aa18.64■□□□□ 0.57
PCDHB11-202ENST00000624887 KIR2DS3Q14952 304 aa18.64■□□□□ 0.57
PCDHB11-202ENST00000624887 VN1R4Q7Z5H5 301 aa18.64■□□□□ 0.57
PCDHB11-202ENST00000624887 FLVCR1-AS1Q8TAF5 88 aa18.64■□□□□ 0.57
PCDHB11-202ENST00000624887 SUN3Q8TAQ9 357 aa18.64■□□□□ 0.57
PCDHB11-202ENST00000624887 RASSF5Q8WWW0 418 aa18.64■□□□□ 0.57
PCDHB11-202ENST00000624887 CNRIP1Q96F85 164 aaPredicted RBP18.64■□□□□ 0.57
PCDHB11-202ENST00000624887 ZNF607Q96SK3 696 aa18.64■□□□□ 0.57
PCDHB11-202ENST00000624887 NIPSNAP1Q9BPW8 284 aa18.64■□□□□ 0.57
PCDHB11-202ENST00000624887 RSPO3Q9BXY4 272 aaPredicted RBP18.64■□□□□ 0.57
PCDHB11-202ENST00000624887 OR51I1Q9H343 314 aa18.64■□□□□ 0.57
PCDHB11-202ENST00000624887 SEMA3GQ9NS98 782 aa18.64■□□□□ 0.57
PCDHB11-202ENST00000624887 COLQQ9Y215 455 aaPredicted RBP18.64■□□□□ 0.57
PCDHB11-202ENST00000624887 HS3ST3A1Q9Y663 406 aa18.64■□□□□ 0.57
PCDHB11-202ENST00000624887 TRBV23OR9-2A0A075B6M9 112 aa18.63■□□□□ 0.57
PCDHB11-202ENST00000624887 C10orf142B7Z368 130 aa18.63■□□□□ 0.57
PCDHB11-202ENST00000624887 PCDH17O14917 1159 aa18.63■□□□□ 0.57
PCDHB11-202ENST00000624887 OR12D1P0DN82 309 aa18.63■□□□□ 0.57
PCDHB11-202ENST00000624887 GGT2P36268 569 aa18.63■□□□□ 0.57
PCDHB11-202ENST00000624887 EMX1Q04741 257 aaPredicted RBP18.63■□□□□ 0.57
PCDHB11-202ENST00000624887 NPTX1Q15818 432 aa18.63■□□□□ 0.57
PCDHB11-202ENST00000624887 C18orf63Q68DL7 685 aa18.63■□□□□ 0.57
PCDHB11-202ENST00000624887 SLC48A1Q6P1K1 146 aa18.63■□□□□ 0.57
PCDHB11-202ENST00000624887 SZRD1Q7Z422 152 aa18.63■□□□□ 0.57
PCDHB11-202ENST00000624887 NRROSQ86YC3 692 aa18.63■□□□□ 0.57
PCDHB11-202ENST00000624887 ENTHD1Q8IYW4 607 aa18.63■□□□□ 0.57
PCDHB11-202ENST00000624887 SFXN5Q8TD22 340 aa18.63■□□□□ 0.57
PCDHB11-202ENST00000624887 PHF10Q8WUB8 498 aaKnown RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms