RNA–Protein interactions for RNA: ENST00000622534.1

GTF3C2-214, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5 BASIC

Gene GTF3C2, Length 1,858 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-214ENST00000622534 PAGE3Q5JUK9 113 aa13.6□□□□□ -0.23
GTF3C2-214ENST00000622534 LRIF1Q5T3J3 769 aa13.6□□□□□ -0.23
GTF3C2-214ENST00000622534 LCN10Q6JVE6 187 aa13.6□□□□□ -0.23
GTF3C2-214ENST00000622534 SLC2A7Q6PXP3 512 aa13.6□□□□□ -0.23
GTF3C2-214ENST00000622534 TIPARPQ7Z3E1 657 aaKnown RBP13.6□□□□□ -0.23
GTF3C2-214ENST00000622534 MIEF2Q96C03 454 aa13.6□□□□□ -0.23
GTF3C2-214ENST00000622534 RCN3Q96D15 328 aa13.6□□□□□ -0.23
GTF3C2-214ENST00000622534 AMDHD1Q96NU7 426 aa13.6□□□□□ -0.23
GTF3C2-214ENST00000622534 PHF12Q96QT6 1004 aa13.6□□□□□ -0.23
GTF3C2-214ENST00000622534 BBS4Q96RK4 519 aa13.6□□□□□ -0.23
GTF3C2-214ENST00000622534 PELOQ9BRX2 385 aaKnown RBP13.6□□□□□ -0.23
GTF3C2-214ENST00000622534 C1orf21Q9H246 121 aa13.6□□□□□ -0.23
GTF3C2-214ENST00000622534 CHST8Q9H2A9 424 aa13.6□□□□□ -0.23
GTF3C2-214ENST00000622534 SLAMF7Q9NQ25 335 aa13.6□□□□□ -0.23
GTF3C2-214ENST00000622534 GPN3Q9UHW5 284 aaPredicted RBP13.6□□□□□ -0.23
GTF3C2-214ENST00000622534 SCN3AQ9NY46 2000 aa13.6□□□□□ -0.23
GTF3C2-214ENST00000622534 A0A096LPI6 279 aa13.59□□□□□ -0.23
GTF3C2-214ENST00000622534 JRKO75564 520 aa13.59□□□□□ -0.23
GTF3C2-214ENST00000622534 SLITRK5O94991 958 aa13.59□□□□□ -0.23
GTF3C2-214ENST00000622534 RECKO95980 971 aa13.59□□□□□ -0.23
GTF3C2-214ENST00000622534 ATP1B1P05026 303 aa13.59□□□□□ -0.23
GTF3C2-214ENST00000622534 ZCCHC18P0CG32 403 aa13.59□□□□□ -0.23
GTF3C2-214ENST00000622534 PORP16435 677 aaPredicted RBP13.59□□□□□ -0.23
GTF3C2-214ENST00000622534 SLC5A2P31639 672 aa13.59□□□□□ -0.23
GTF3C2-214ENST00000622534 SLC13A2Q13183 592 aa13.59□□□□□ -0.23
GTF3C2-214ENST00000622534 ERV3-1Q14264 604 aa13.59□□□□□ -0.23
GTF3C2-214ENST00000622534 MARCH9Q86YJ5 346 aa13.59□□□□□ -0.23
GTF3C2-214ENST00000622534 LRRC25Q8N386 305 aaPredicted RBP13.59□□□□□ -0.23
GTF3C2-214ENST00000622534 SUN3Q8TAQ9 357 aa13.59□□□□□ -0.23
GTF3C2-214ENST00000622534 NPAS2Q99743 824 aa13.59□□□□□ -0.23
GTF3C2-214ENST00000622534 RBCK1Q9BYM8 510 aa13.59□□□□□ -0.23
GTF3C2-214ENST00000622534 AKIRIN1Q9H9L7 192 aaPredicted RBP13.59□□□□□ -0.23
GTF3C2-214ENST00000622534 NEUROD4Q9HD90 331 aa13.59□□□□□ -0.23
GTF3C2-214ENST00000622534 ASCL3Q9NQ33 180 aa13.59□□□□□ -0.23
GTF3C2-214ENST00000622534 GID8Q9NWU2 228 aa13.59□□□□□ -0.23
GTF3C2-214ENST00000622534 NDE1Q9NXR1 346 aa13.59□□□□□ -0.23
GTF3C2-214ENST00000622534 SPTBP11277 2137 aa13.59□□□□□ -0.23
GTF3C2-214ENST00000622534 STMND1H3BQB6 276 aa13.59□□□□□ -0.23
GTF3C2-214ENST00000622534 LDB3O75112 727 aa13.59□□□□□ -0.23
GTF3C2-214ENST00000622534 KCNH1O95259 989 aa13.59□□□□□ -0.23
GTF3C2-214ENST00000622534 HOXB9P17482 250 aaPredicted RBP13.59□□□□□ -0.23
GTF3C2-214ENST00000622534 MANFP55145 182 aaKnown RBP13.59□□□□□ -0.23
GTF3C2-214ENST00000622534 BTG2P78543 158 aa13.59□□□□□ -0.23
GTF3C2-214ENST00000622534 STX4Q12846 297 aa13.59□□□□□ -0.23
GTF3C2-214ENST00000622534 NCF4Q15080 339 aa13.59□□□□□ -0.23
GTF3C2-214ENST00000622534 KIF26BQ2KJY2 2108 aa13.59□□□□□ -0.23
GTF3C2-214ENST00000622534 TRMT5Q32P41 509 aaKnown RBP13.59□□□□□ -0.23
GTF3C2-214ENST00000622534 DLEU7Q6UYE1 221 aa13.59□□□□□ -0.23
GTF3C2-214ENST00000622534 NLGN4XQ8N0W4 816 aa13.59□□□□□ -0.23
GTF3C2-214ENST00000622534 NLGN4YQ8NFZ3 816 aaPredicted RBP13.59□□□□□ -0.23
GTF3C2-214ENST00000622534 SPSB2Q99619 263 aa13.59□□□□□ -0.23
GTF3C2-214ENST00000622534 PAIP1Q9H074 479 aaKnown RBP13.59□□□□□ -0.23
GTF3C2-214ENST00000622534 GLIPR2Q9H4G4 154 aa13.59□□□□□ -0.23
GTF3C2-214ENST00000622534 TAS2R9Q9NYW1 312 aa13.59□□□□□ -0.23
GTF3C2-214ENST00000622534 PCDHGB4Q9UN71 923 aa13.59□□□□□ -0.23
GTF3C2-214ENST00000622534 GMEB1Q9Y692 573 aa13.59□□□□□ -0.23
GTF3C2-214ENST00000622534 CEP250Q9BV73 2442 aa13.59□□□□□ -0.23
GTF3C2-214ENST00000622534 NUP210LQ5VU65 1888 aa13.59□□□□□ -0.23
GTF3C2-214ENST00000622534 PTPRZ1P23471 2315 aaPredicted RBP13.58□□□□□ -0.23
GTF3C2-214ENST00000622534 DMXL1Q9Y485 3027 aa13.58□□□□□ -0.24
GTF3C2-214ENST00000622534 TGFBR3LH3BV60 316 aa13.58□□□□□ -0.24
GTF3C2-214ENST00000622534 RFXANKO14593 260 aa13.58□□□□□ -0.24
GTF3C2-214ENST00000622534 AIM2O14862 343 aa13.58□□□□□ -0.24
GTF3C2-214ENST00000622534 PCDH17O14917 1159 aa13.58□□□□□ -0.24
GTF3C2-214ENST00000622534 CNOT3O75175 753 aaKnown RBP13.58□□□□□ -0.24
GTF3C2-214ENST00000622534 C6orf47O95873 294 aa13.58□□□□□ -0.24
GTF3C2-214ENST00000622534 KRT16P08779 473 aa13.58□□□□□ -0.24
GTF3C2-214ENST00000622534 PTPN6P29350 595 aa13.58□□□□□ -0.24
GTF3C2-214ENST00000622534 FEN1P39748 380 aaKnown RBP13.58□□□□□ -0.24
GTF3C2-214ENST00000622534 STT3AP46977 705 aa13.58□□□□□ -0.24
GTF3C2-214ENST00000622534 RASSF2P50749 326 aa13.58□□□□□ -0.24
GTF3C2-214ENST00000622534 NCBP2P52298 156 aaKnown RBP eCLIP13.58□□□□□ -0.24
GTF3C2-214ENST00000622534 ART3Q13508 389 aa13.58□□□□□ -0.24
GTF3C2-214ENST00000622534 MLIPQ5VWP3 458 aa13.58□□□□□ -0.24
GTF3C2-214ENST00000622534 C8orf82Q6P1X6 216 aaPredicted RBP13.58□□□□□ -0.24
GTF3C2-214ENST00000622534 ANKRD46Q86W74 232 aa13.58□□□□□ -0.24
GTF3C2-214ENST00000622534 OR4N5Q8IXE1 308 aa13.58□□□□□ -0.24
GTF3C2-214ENST00000622534 ST13P4Q8IZP2 240 aaPredicted RBP13.58□□□□□ -0.24
GTF3C2-214ENST00000622534 CLECL1Q8IZS7 167 aa13.58□□□□□ -0.24
GTF3C2-214ENST00000622534 RNF31Q96EP0 1072 aa13.58□□□□□ -0.24
GTF3C2-214ENST00000622534 PTCHD1Q96NR3 888 aa13.58□□□□□ -0.24
GTF3C2-214ENST00000622534 PANX1Q96RD7 426 aa13.58□□□□□ -0.24
GTF3C2-214ENST00000622534 ALOXE3Q9BYJ1 711 aa13.58□□□□□ -0.24
GTF3C2-214ENST00000622534 VN1R1Q9GZP7 353 aa13.58□□□□□ -0.24
GTF3C2-214ENST00000622534 NECTIN3Q9NQS3 549 aa13.58□□□□□ -0.24
GTF3C2-214ENST00000622534 WASF3Q9UPY6 502 aa13.58□□□□□ -0.24
GTF3C2-214ENST00000622534 ERVK-11Q9UQG0 969 aa13.58□□□□□ -0.24
GTF3C2-214ENST00000622534 TRBV5-3A0A0A0MS03 114 aa13.57□□□□□ -0.24
GTF3C2-214ENST00000622534 TEX51A0A1B0GUA7 166 aa13.57□□□□□ -0.24
GTF3C2-214ENST00000622534 TCRBV16S1A1N1A0A5B0 115 aa13.57□□□□□ -0.24
GTF3C2-214ENST00000622534 B2RBV5 119 aa13.57□□□□□ -0.24
GTF3C2-214ENST00000622534 RAD1O60671 282 aa13.57□□□□□ -0.24
GTF3C2-214ENST00000622534 CDC123O75794 336 aaPredicted RBP13.57□□□□□ -0.24
GTF3C2-214ENST00000622534 C8orf89P0DMQ9 161 aa13.57□□□□□ -0.24
GTF3C2-214ENST00000622534 CPA2P48052 419 aa13.57□□□□□ -0.24
GTF3C2-214ENST00000622534 NUDT2P50583 147 aa13.57□□□□□ -0.24
GTF3C2-214ENST00000622534 HBA1P69905 142 aa13.57□□□□□ -0.24
GTF3C2-214ENST00000622534 DUSP2Q05923 314 aa13.57□□□□□ -0.24
GTF3C2-214ENST00000622534 NFYCQ13952 458 aa13.57□□□□□ -0.24
GTF3C2-214ENST00000622534 ZNF750Q32MQ0 723 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms