RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 AKAP6Q13023 2319 aa8.81□□□□□ -1
GGA3-223ENST00000621870 POLR2AP24928 1970 aaKnown RBP8.81□□□□□ -1
GGA3-223ENST00000621870 ADAMTS7Q9UKP4 1686 aa8.81□□□□□ -1
GGA3-223ENST00000621870 CIB4A0PJX0 185 aa8.81□□□□□ -1
GGA3-223ENST00000621870 ANTXRLA6NF34 631 aa8.81□□□□□ -1
GGA3-223ENST00000621870 TLR4O00206 839 aa8.81□□□□□ -1
GGA3-223ENST00000621870 GSTM3P21266 225 aa8.81□□□□□ -1
GGA3-223ENST00000621870 ADARP55265 1226 aaKnown RBP8.81□□□□□ -1
GGA3-223ENST00000621870 TAS2R38P59533 333 aa8.81□□□□□ -1
GGA3-223ENST00000621870 ZXDBP98169 803 aa8.81□□□□□ -1
GGA3-223ENST00000621870 PRDX1Q06830 199 aaKnown RBP8.81□□□□□ -1
GGA3-223ENST00000621870 RPE65Q16518 533 aa8.81□□□□□ -1
GGA3-223ENST00000621870 ODF4Q2M2E3 257 aa8.81□□□□□ -1
GGA3-223ENST00000621870 CTC1Q2NKJ3 1217 aa8.81□□□□□ -1
GGA3-223ENST00000621870 GRHL2Q6ISB3 625 aa8.81□□□□□ -1
GGA3-223ENST00000621870 SATL1Q86VE3 508 aa8.81□□□□□ -1
GGA3-223ENST00000621870 ACOT4Q8N9L9 421 aa8.81□□□□□ -1
GGA3-223ENST00000621870 POC5Q8NA72 575 aa8.81□□□□□ -1
GGA3-223ENST00000621870 OR52P1PQ8NH57 321 aa8.81□□□□□ -1
GGA3-223ENST00000621870 AP3S1Q92572 193 aa8.81□□□□□ -1
GGA3-223ENST00000621870 FANCFQ9NPI8 374 aa8.81□□□□□ -1
GGA3-223ENST00000621870 CUEDC1Q9NWM3 386 aaPredicted RBP8.81□□□□□ -1
GGA3-223ENST00000621870 ADAMTS6Q9UKP5 1117 aa8.81□□□□□ -1
GGA3-223ENST00000621870 INTS6Q9UL03 887 aaKnown RBP8.81□□□□□ -1
GGA3-223ENST00000621870 DNMT3AQ9Y6K1 912 aaPredicted RBP8.81□□□□□ -1
GGA3-223ENST00000621870 SCN7AQ01118 1682 aa8.81□□□□□ -1
GGA3-223ENST00000621870 DPPA5A6NC42 116 aa8.81□□□□□ -1
GGA3-223ENST00000621870 POM121BA6NF01 834 aa8.81□□□□□ -1
GGA3-223ENST00000621870 GPR89AB7ZAQ6 455 aa8.81□□□□□ -1
GGA3-223ENST00000621870 LDB3O75112 727 aa8.81□□□□□ -1
GGA3-223ENST00000621870 IFNA6P05013 189 aa8.81□□□□□ -1
GGA3-223ENST00000621870 GPR89BP0CG08 455 aa8.81□□□□□ -1
GGA3-223ENST00000621870 SRFP11831 508 aa8.81□□□□□ -1
GGA3-223ENST00000621870 SMSP52788 366 aa8.81□□□□□ -1
GGA3-223ENST00000621870 FOXA1P55317 472 aa8.81□□□□□ -1
GGA3-223ENST00000621870 RASGEF1BQ0VAM2 473 aa8.81□□□□□ -1
GGA3-223ENST00000621870 PMS2P3Q13401 168 aa8.81□□□□□ -1
GGA3-223ENST00000621870 NR0B2Q15466 257 aa8.81□□□□□ -1
GGA3-223ENST00000621870 GTDC1Q4AE62 458 aa8.81□□□□□ -1
GGA3-223ENST00000621870 ASB11Q8WXH4 323 aa8.81□□□□□ -1
GGA3-223ENST00000621870 MOAP1Q96BY2 351 aa8.81□□□□□ -1
GGA3-223ENST00000621870 ADAD1Q96M93 576 aaKnown RBP8.81□□□□□ -1
GGA3-223ENST00000621870 TRNAU1APQ9NX07 287 aaKnown RBP8.81□□□□□ -1
GGA3-223ENST00000621870 SLC39A1Q9NY26 324 aa8.81□□□□□ -1
GGA3-223ENST00000621870 MMP17Q9ULZ9 603 aa8.81□□□□□ -1
GGA3-223ENST00000621870 SRPK3Q9UPE1 567 aa8.81□□□□□ -1
GGA3-223ENST00000621870 SSC5DA1L4H1 1573 aa8.81□□□□□ -1
GGA3-223ENST00000621870 ANKRD36CQ5JPF3 1778 aa8.81□□□□□ -1
GGA3-223ENST00000621870 UNC13CQ8NB66 2214 aa8.8□□□□□ -1
GGA3-223ENST00000621870 MCM3APO60318 1980 aa8.8□□□□□ -1
GGA3-223ENST00000621870 A0A096LPI6 279 aa8.8□□□□□ -1
GGA3-223ENST00000621870 A8MVJ9 347 aa8.8□□□□□ -1
GGA3-223ENST00000621870 VSTM5A8MXK1 200 aa8.8□□□□□ -1
GGA3-223ENST00000621870 TRIM3O75382 744 aaPredicted RBP8.8□□□□□ -1
GGA3-223ENST00000621870 KLHL18O94889 574 aa8.8□□□□□ -1
GGA3-223ENST00000621870 SYNGR4O95473 234 aa8.8□□□□□ -1
GGA3-223ENST00000621870 C1orf105O95561 183 aa8.8□□□□□ -1
GGA3-223ENST00000621870 OR12D2P58182 307 aa8.8□□□□□ -1
GGA3-223ENST00000621870 ARL9Q6T311 187 aa8.8□□□□□ -1
GGA3-223ENST00000621870 PRR22Q8IZ63 422 aa8.8□□□□□ -1
GGA3-223ENST00000621870 CLIP4Q8N3C7 705 aa8.8□□□□□ -1
GGA3-223ENST00000621870 RNF175Q8N4F7 328 aa8.8□□□□□ -1
GGA3-223ENST00000621870 TSPEARQ8WU66 669 aa8.8□□□□□ -1
GGA3-223ENST00000621870 ASB15Q8WXK1 588 aa8.8□□□□□ -1
GGA3-223ENST00000621870 TMCO6Q96DC7 493 aa8.8□□□□□ -1
GGA3-223ENST00000621870 COX4I2Q96KJ9 171 aa8.8□□□□□ -1
GGA3-223ENST00000621870 MRPS26Q9BYN8 205 aaKnown RBP8.8□□□□□ -1
GGA3-223ENST00000621870 TTTY10Q9BZA0 68 aa8.8□□□□□ -1
GGA3-223ENST00000621870 C6orf106Q9H6K1 298 aaPredicted RBP8.8□□□□□ -1
GGA3-223ENST00000621870 IL21Q9HBE4 155 aa8.8□□□□□ -1
GGA3-223ENST00000621870 TCF7L1Q9HCS4 588 aa8.8□□□□□ -1
GGA3-223ENST00000621870 FGF22Q9HCT0 170 aa8.8□□□□□ -1
GGA3-223ENST00000621870 HPF1Q9NWY4 346 aa8.8□□□□□ -1
GGA3-223ENST00000621870 MKS1Q9NXB0 559 aa8.8□□□□□ -1
GGA3-223ENST00000621870 IFT52Q9Y366 437 aa8.8□□□□□ -1
GGA3-223ENST00000621870 RPL36Q9Y3U8 105 aaKnown RBP8.8□□□□□ -1
GGA3-223ENST00000621870 PCDHGB7Q9Y5F8 929 aa8.8□□□□□ -1
GGA3-223ENST00000621870 IGLV3-10A0A075B6K4 115 aa8.8□□□□□ -1
GGA3-223ENST00000621870 A0A1B0GW55 424 aa8.8□□□□□ -1
GGA3-223ENST00000621870 HYKKA2RU49 373 aa8.8□□□□□ -1
GGA3-223ENST00000621870 ANXA2P2A6NMY6 339 aa8.8□□□□□ -1
GGA3-223ENST00000621870 G3V2L1 256 aa8.8□□□□□ -1
GGA3-223ENST00000621870 KHDRBS3O75525 346 aaKnown RBP8.8□□□□□ -1
GGA3-223ENST00000621870 ANXA2P07355 339 aaKnown RBP8.8□□□□□ -1
GGA3-223ENST00000621870 DUX4L2P0CJ85 424 aa8.8□□□□□ -1
GGA3-223ENST00000621870 DUX4L3P0CJ86 424 aa8.8□□□□□ -1
GGA3-223ENST00000621870 DUX4L4P0CJ87 422 aa8.8□□□□□ -1
GGA3-223ENST00000621870 DUX4L5P0CJ88 424 aa8.8□□□□□ -1
GGA3-223ENST00000621870 DUX4L6P0CJ89 424 aa8.8□□□□□ -1
GGA3-223ENST00000621870 DUX4L7P0CJ90 424 aa8.8□□□□□ -1
GGA3-223ENST00000621870 AZGP1P25311 298 aaKnown RBP8.8□□□□□ -1
GGA3-223ENST00000621870 HSD11B1P28845 292 aa8.8□□□□□ -1
GGA3-223ENST00000621870 MAGEA6P43360 314 aa8.8□□□□□ -1
GGA3-223ENST00000621870 RACK1P63244 317 aaKnown RBP8.8□□□□□ -1
GGA3-223ENST00000621870 SEMA3BQ13214 749 aa8.8□□□□□ -1
GGA3-223ENST00000621870 SERTAD2Q14140 314 aa8.8□□□□□ -1
GGA3-223ENST00000621870 ERV3-1Q14264 604 aa8.8□□□□□ -1
GGA3-223ENST00000621870 KLHL22Q53GT1 634 aa8.8□□□□□ -1
GGA3-223ENST00000621870 ATG14Q6ZNE5 492 aa8.8□□□□□ -1
GGA3-223ENST00000621870 KCTD8Q6ZWB6 473 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms