RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 NEUROD4Q9HD90 331 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 PRDM6Q9NQX0 595 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 EXD2Q9NVH0 621 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 ZNF451Q9Y4E5 1061 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 SCN3AQ9NY46 2000 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 ARHGEF17Q96PE2 2063 aaPredicted RBP9.4□□□□□ -0.9
VTA1-205ENST00000620996 SNRNP200O75643 2136 aaKnown RBP9.4□□□□□ -0.9
VTA1-205ENST00000620996 LOC105369274A0A096LPK9 316 aa9.4□□□□□ -0.9
VTA1-205ENST00000620996 LOC102723532A0A0G2JNH3 316 aa9.4□□□□□ -0.9
VTA1-205ENST00000620996 A6NCN8 305 aa9.4□□□□□ -0.9
VTA1-205ENST00000620996 MITFO75030 526 aaPredicted RBP9.4□□□□□ -0.9
VTA1-205ENST00000620996 DCNP07585 359 aaKnown RBP9.4□□□□□ -0.9
VTA1-205ENST00000620996 CPN2P22792 545 aa9.4□□□□□ -0.9
VTA1-205ENST00000620996 PCSK6P29122 969 aa9.4□□□□□ -0.9
VTA1-205ENST00000620996 FADDQ13158 208 aa9.4□□□□□ -0.9
VTA1-205ENST00000620996 ZIC1Q15915 447 aa9.4□□□□□ -0.9
VTA1-205ENST00000620996 FRMPD2BQ6IN97 320 aa9.4□□□□□ -0.9
VTA1-205ENST00000620996 VN1R4Q7Z5H5 301 aa9.4□□□□□ -0.9
VTA1-205ENST00000620996 OR4N4Q8N0Y3 316 aa9.4□□□□□ -0.9
VTA1-205ENST00000620996 SVOPLQ8N434 492 aa9.4□□□□□ -0.9
VTA1-205ENST00000620996 GOT1L1Q8NHS2 421 aaPredicted RBP9.4□□□□□ -0.9
VTA1-205ENST00000620996 GPBAR1Q8TDU6 330 aa9.4□□□□□ -0.9
VTA1-205ENST00000620996 RSC1A1Q92681 617 aa9.4□□□□□ -0.9
VTA1-205ENST00000620996 SPATA9Q9BWV2 254 aa9.4□□□□□ -0.9
VTA1-205ENST00000620996 IL1RAPQ9NPH3 570 aa9.4□□□□□ -0.9
VTA1-205ENST00000620996 PRDM7Q9NQW5 492 aa9.4□□□□□ -0.9
VTA1-205ENST00000620996 POT1Q9NUX5 634 aa9.4□□□□□ -0.9
VTA1-205ENST00000620996 OLAHQ9NV23 265 aa9.4□□□□□ -0.9
VTA1-205ENST00000620996 KLHL3Q9UH77 587 aa9.4□□□□□ -0.9
VTA1-205ENST00000620996 ADAM29Q9UKF5 820 aa9.4□□□□□ -0.9
VTA1-205ENST00000620996 PCOLCE2Q9UKZ9 415 aa9.4□□□□□ -0.9
VTA1-205ENST00000620996 P2RX6O15547 441 aa9.4□□□□□ -0.9
VTA1-205ENST00000620996 TNFRSF21O75509 655 aa9.4□□□□□ -0.9
VTA1-205ENST00000620996 ALPLP05186 524 aa9.4□□□□□ -0.9
VTA1-205ENST00000620996 OR12D1P0DN82 309 aa9.4□□□□□ -0.9
VTA1-205ENST00000620996 CDH3P22223 829 aa9.4□□□□□ -0.9
VTA1-205ENST00000620996 CD38P28907 300 aa9.4□□□□□ -0.9
VTA1-205ENST00000620996 RRM2P31350 389 aa9.4□□□□□ -0.9
VTA1-205ENST00000620996 HNRNPFP52597 415 aaKnown RBP9.4□□□□□ -0.9
VTA1-205ENST00000620996 MVDP53602 400 aa9.4□□□□□ -0.9
VTA1-205ENST00000620996 VSX2P58304 361 aaPredicted RBP9.4□□□□□ -0.9
VTA1-205ENST00000620996 SPIBQ01892 262 aa9.4□□□□□ -0.9
VTA1-205ENST00000620996 ATP1A4Q13733 1029 aa9.4□□□□□ -0.9
VTA1-205ENST00000620996 INAQ16352 499 aa9.4□□□□□ -0.9
VTA1-205ENST00000620996 SLC36A3Q495N2 470 aa9.4□□□□□ -0.9
VTA1-205ENST00000620996 CEP68Q76N32 757 aa9.4□□□□□ -0.9
VTA1-205ENST00000620996 HIPK1Q86Z02 1210 aa9.4□□□□□ -0.9
VTA1-205ENST00000620996 ZFP28Q8NHY6 868 aa9.4□□□□□ -0.9
VTA1-205ENST00000620996 GAB3Q8WWW8 586 aa9.4□□□□□ -0.9
VTA1-205ENST00000620996 NCSTNQ92542 709 aa9.4□□□□□ -0.9
VTA1-205ENST00000620996 TAMM41Q96BW9 452 aa9.4□□□□□ -0.9
VTA1-205ENST00000620996 SHDQ96IW2 340 aa9.4□□□□□ -0.9
VTA1-205ENST00000620996 MUS81Q96NY9 551 aa9.4□□□□□ -0.9
VTA1-205ENST00000620996 DOHHQ9BU89 302 aa9.4□□□□□ -0.9
VTA1-205ENST00000620996 LRRC61Q9BV99 259 aa9.4□□□□□ -0.9
VTA1-205ENST00000620996 CHST8Q9H2A9 424 aa9.4□□□□□ -0.9
VTA1-205ENST00000620996 C8orf4Q9NR00 106 aa9.4□□□□□ -0.9
VTA1-205ENST00000620996 ANKMY1Q9P2S6 941 aa9.4□□□□□ -0.9
VTA1-205ENST00000620996 PCDHGA2Q9Y5H1 932 aa9.4□□□□□ -0.9
VTA1-205ENST00000620996 ZNF780BQ9Y6R6 833 aa9.4□□□□□ -0.9
VTA1-205ENST00000620996 COL4A2P08572 1712 aa9.4□□□□□ -0.91
VTA1-205ENST00000620996 A8MU76 341 aa9.39□□□□□ -0.91
VTA1-205ENST00000620996 SERPINB7O75635 380 aa9.39□□□□□ -0.91
VTA1-205ENST00000620996 H6PDO95479 791 aa9.39□□□□□ -0.91
VTA1-205ENST00000620996 SMIM18P0DKX4 95 aa9.39□□□□□ -0.91
VTA1-205ENST00000620996 NR2F1P10589 423 aa9.39□□□□□ -0.91
VTA1-205ENST00000620996 DRD2P14416 443 aa9.39□□□□□ -0.91
VTA1-205ENST00000620996 IGFBP5P24593 272 aa9.39□□□□□ -0.91
VTA1-205ENST00000620996 STT3AP46977 705 aa9.39□□□□□ -0.91
VTA1-205ENST00000620996 SIM1P81133 766 aaPredicted RBP9.39□□□□□ -0.91
VTA1-205ENST00000620996 CAMK2BQ13554 666 aa9.39□□□□□ -0.91
VTA1-205ENST00000620996 SIM2Q14190 667 aaPredicted RBP9.39□□□□□ -0.91
VTA1-205ENST00000620996 GANABQ14697 944 aaKnown RBP9.39□□□□□ -0.91
VTA1-205ENST00000620996 LASP1Q14847 261 aaKnown RBP9.39□□□□□ -0.91
VTA1-205ENST00000620996 ZNF630Q2M218 657 aaPredicted RBP9.39□□□□□ -0.91
VTA1-205ENST00000620996 ANKDD1AQ495B1 522 aa9.39□□□□□ -0.91
VTA1-205ENST00000620996 FBXO42Q6P3S6 717 aa9.39□□□□□ -0.91
VTA1-205ENST00000620996 OR52E4Q8NGH9 312 aa9.39□□□□□ -0.91
VTA1-205ENST00000620996 VANGL1Q8TAA9 524 aaPredicted RBP9.39□□□□□ -0.91
VTA1-205ENST00000620996 KAT2AQ92830 837 aa9.39□□□□□ -0.91
VTA1-205ENST00000620996 MRPS26Q9BYN8 205 aaKnown RBP9.39□□□□□ -0.91
VTA1-205ENST00000620996 TBC1D17Q9HA65 648 aa9.39□□□□□ -0.91
VTA1-205ENST00000620996 TM9SF3Q9HD45 589 aa9.39□□□□□ -0.91
VTA1-205ENST00000620996 C1GALT1Q9NS00 363 aa9.39□□□□□ -0.91
VTA1-205ENST00000620996 TUBA8Q9NY65 449 aaPredicted RBP9.39□□□□□ -0.91
VTA1-205ENST00000620996 FAM32AQ9Y421 112 aaKnown RBP9.39□□□□□ -0.91
VTA1-205ENST00000620996 FANCMQ8IYD8 2048 aa9.39□□□□□ -0.91
VTA1-205ENST00000620996 KIR2DS5A0A0G2JLQ3 304 aa9.39□□□□□ -0.91
VTA1-205ENST00000620996 A0A0G2JNG1 304 aa9.39□□□□□ -0.91
VTA1-205ENST00000620996 KIR2DS3K7RE56 304 aa9.39□□□□□ -0.91
VTA1-205ENST00000620996 ZBTB11O95625 1053 aaPredicted RBP9.39□□□□□ -0.91
VTA1-205ENST00000620996 NR2F6P10588 404 aa9.39□□□□□ -0.91
VTA1-205ENST00000620996 CDH12P55289 794 aa9.39□□□□□ -0.91
VTA1-205ENST00000620996 SNRPNP63162 240 aaKnown RBP9.39□□□□□ -0.91
VTA1-205ENST00000620996 RELAQ04206 551 aa9.39□□□□□ -0.91
VTA1-205ENST00000620996 KIR2DS5Q14953 304 aa9.39□□□□□ -0.91
VTA1-205ENST00000620996 DEFB133Q30KQ1 61 aa9.39□□□□□ -0.91
VTA1-205ENST00000620996 IFI44LQ53G44 452 aa9.39□□□□□ -0.91
VTA1-205ENST00000620996 FCRL6Q6DN72 434 aa9.39□□□□□ -0.91
VTA1-205ENST00000620996 B3GNT6Q6ZMB0 384 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms