RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 IGKV3-11P04433 115 aa15.89■□□□□ 0.13
HMGN3-203ENST00000620514 NR2F6P10588 404 aa15.89■□□□□ 0.13
HMGN3-203ENST00000620514 CDH13P55290 713 aa15.89■□□□□ 0.13
HMGN3-203ENST00000620514 PLIN5Q00G26 463 aa15.89■□□□□ 0.13
HMGN3-203ENST00000620514 ASPHQ12797 758 aa15.89■□□□□ 0.13
HMGN3-203ENST00000620514 CDSNQ15517 529 aa15.89■□□□□ 0.13
HMGN3-203ENST00000620514 SGO1Q5FBB7 561 aa15.89■□□□□ 0.13
HMGN3-203ENST00000620514 FRG2Q64ET8 278 aa15.89■□□□□ 0.13
HMGN3-203ENST00000620514 TTC19Q6DKK2 380 aaPredicted RBP15.89■□□□□ 0.13
HMGN3-203ENST00000620514 MILR1Q7Z6M3 343 aa15.89■□□□□ 0.13
HMGN3-203ENST00000620514 NUDT13Q86X67 352 aa15.89■□□□□ 0.13
HMGN3-203ENST00000620514 CEP112Q8N8E3 955 aa15.89■□□□□ 0.13
HMGN3-203ENST00000620514 OR2M7Q8NG81 312 aa15.89■□□□□ 0.13
HMGN3-203ENST00000620514 OR4F6Q8NGB9 312 aa15.89■□□□□ 0.13
HMGN3-203ENST00000620514 OR5L2Q8NGL0 311 aa15.89■□□□□ 0.13
HMGN3-203ENST00000620514 ZNF483Q8TF39 744 aaPredicted RBP15.89■□□□□ 0.13
HMGN3-203ENST00000620514 RBM18Q96H35 190 aaKnown RBP15.89■□□□□ 0.13
HMGN3-203ENST00000620514 FRG2BQ96QU4 278 aa15.89■□□□□ 0.13
HMGN3-203ENST00000620514 SERPINI1Q99574 410 aa15.89■□□□□ 0.13
HMGN3-203ENST00000620514 TEX10Q9NXF1 929 aaPredicted RBP15.89■□□□□ 0.13
HMGN3-203ENST00000620514 PPT2Q9UMR5 302 aa15.89■□□□□ 0.13
HMGN3-203ENST00000620514 ITPR2Q14571 2701 aa15.89■□□□□ 0.13
HMGN3-203ENST00000620514 PCNX1Q96RV3 2341 aa15.89■□□□□ 0.13
HMGN3-203ENST00000620514 CELSR2Q9HCU4 2923 aa15.88■□□□□ 0.13
HMGN3-203ENST00000620514 FAM166BA8MTA8 275 aa15.88■□□□□ 0.13
HMGN3-203ENST00000620514 ADAM10O14672 748 aa15.88■□□□□ 0.13
HMGN3-203ENST00000620514 PGRMC2O15173 223 aa15.88■□□□□ 0.13
HMGN3-203ENST00000620514 RIPK2O43353 540 aa15.88■□□□□ 0.13
HMGN3-203ENST00000620514 SEMA3DO95025 777 aa15.88■□□□□ 0.13
HMGN3-203ENST00000620514 ABHD2P08910 425 aa15.88■□□□□ 0.13
HMGN3-203ENST00000620514 FAM153BP0C7A2 387 aa15.88■□□□□ 0.13
HMGN3-203ENST00000620514 RHOXF2BP0C7M4 288 aa15.88■□□□□ 0.13
HMGN3-203ENST00000620514 HERVK_113P63132 956 aa15.88■□□□□ 0.13
HMGN3-203ENST00000620514 ERVK-8P63133 956 aa15.88■□□□□ 0.13
HMGN3-203ENST00000620514 ZNF267Q14586 743 aaPredicted RBP15.88■□□□□ 0.13
HMGN3-203ENST00000620514 FAM153CQ494X1 144 aa15.88■□□□□ 0.13
HMGN3-203ENST00000620514 PIGGQ5H8A4 983 aa15.88■□□□□ 0.13
HMGN3-203ENST00000620514 BNC2Q6ZN30 1099 aaPredicted RBP15.88■□□□□ 0.13
HMGN3-203ENST00000620514 RTL4Q6ZR62 310 aa15.88■□□□□ 0.13
HMGN3-203ENST00000620514 IFT20Q8IY31 132 aa15.88■□□□□ 0.13
HMGN3-203ENST00000620514 ST13P4Q8IZP2 240 aaPredicted RBP15.88■□□□□ 0.13
HMGN3-203ENST00000620514 SLC34A3Q8N130 599 aa15.88■□□□□ 0.13
HMGN3-203ENST00000620514 C7orf57Q8NEG2 295 aa15.88■□□□□ 0.13
HMGN3-203ENST00000620514 MARVELD3Q96A59 401 aa15.88■□□□□ 0.13
HMGN3-203ENST00000620514 FBXL20Q96IG2 436 aa15.88■□□□□ 0.13
HMGN3-203ENST00000620514 RHOXF2Q9BQY4 288 aa15.88■□□□□ 0.13
HMGN3-203ENST00000620514 CNPPD1Q9BV87 410 aa15.88■□□□□ 0.13
HMGN3-203ENST00000620514 ERVK-6Q9BXR3 956 aa15.88■□□□□ 0.13
HMGN3-203ENST00000620514 MRPL1Q9BYD6 325 aaKnown RBP15.88■□□□□ 0.13
HMGN3-203ENST00000620514 DEFB127Q9H1M4 99 aa15.88■□□□□ 0.13
HMGN3-203ENST00000620514 FARSBQ9NSD9 589 aaKnown RBP15.88■□□□□ 0.13
HMGN3-203ENST00000620514 ERVK-19Q9WJR5 959 aa15.88■□□□□ 0.13
HMGN3-203ENST00000620514 KLF2Q9Y5W3 355 aaPredicted RBP15.88■□□□□ 0.13
HMGN3-203ENST00000620514 CRYBG3Q68DQ2 2970 aa15.88■□□□□ 0.13
HMGN3-203ENST00000620514 NCOA6Q14686 2063 aaPredicted RBP15.88■□□□□ 0.13
HMGN3-203ENST00000620514 PRRG2O14669 202 aa15.87■□□□□ 0.13
HMGN3-203ENST00000620514 OR10H2O60403 315 aa15.87■□□□□ 0.13
HMGN3-203ENST00000620514 NADKO95544 446 aaPredicted RBP15.87■□□□□ 0.13
HMGN3-203ENST00000620514 PRF1P14222 555 aa15.87■□□□□ 0.13
HMGN3-203ENST00000620514 HTR1EP28566 365 aa15.87■□□□□ 0.13
HMGN3-203ENST00000620514 PTGS2P35354 604 aa15.87■□□□□ 0.13
HMGN3-203ENST00000620514 PPIAP62937 165 aaKnown RBP15.87■□□□□ 0.13
HMGN3-203ENST00000620514 PLGLB1Q02325 96 aa15.87■□□□□ 0.13
HMGN3-203ENST00000620514 IFT88Q13099 833 aa15.87■□□□□ 0.13
HMGN3-203ENST00000620514 BIKQ13323 160 aa15.87■□□□□ 0.13
HMGN3-203ENST00000620514 MPEG1Q2M385 716 aa15.87■□□□□ 0.13
HMGN3-203ENST00000620514 GGTA1PQ4G0N0 100 aa15.87■□□□□ 0.13
HMGN3-203ENST00000620514 TEX35Q5T0J7 233 aa15.87■□□□□ 0.13
HMGN3-203ENST00000620514 LETMD1Q6P1Q0 360 aa15.87■□□□□ 0.13
HMGN3-203ENST00000620514 ADGRD1Q6QNK2 874 aa15.87■□□□□ 0.13
HMGN3-203ENST00000620514 OPN5Q6U736 354 aa15.87■□□□□ 0.13
HMGN3-203ENST00000620514 TRMT10CQ7L0Y3 403 aaKnown RBP15.87■□□□□ 0.13
HMGN3-203ENST00000620514 LRRN4CLQ8ND94 238 aa15.87■□□□□ 0.13
HMGN3-203ENST00000620514 NUBPLQ8TB37 319 aa15.87■□□□□ 0.13
HMGN3-203ENST00000620514 WDR41Q9HAD4 459 aa15.87■□□□□ 0.13
HMGN3-203ENST00000620514 TMEM216Q9P0N5 145 aa15.87■□□□□ 0.13
HMGN3-203ENST00000620514 ZNF225Q9UK10 706 aa15.87■□□□□ 0.13
HMGN3-203ENST00000620514 HRH3Q9Y5N1 445 aa15.87■□□□□ 0.13
HMGN3-203ENST00000620514 EML6Q6ZMW3 1958 aa15.86■□□□□ 0.13
HMGN3-203ENST00000620514 HNRNPRO43390 633 aaKnown RBP15.86■□□□□ 0.13
HMGN3-203ENST00000620514 DYRK3O43781 588 aa15.86■□□□□ 0.13
HMGN3-203ENST00000620514 CLPSP04118 112 aa15.86■□□□□ 0.13
HMGN3-203ENST00000620514 KLK1P06870 262 aa15.86■□□□□ 0.13
HMGN3-203ENST00000620514 TPOP07202 933 aa15.86■□□□□ 0.13
HMGN3-203ENST00000620514 CCL3P10147 92 aa15.86■□□□□ 0.13
HMGN3-203ENST00000620514 CNR1P21554 472 aa15.86■□□□□ 0.13
HMGN3-203ENST00000620514 SMSP52788 366 aa15.86■□□□□ 0.13
HMGN3-203ENST00000620514 SPRED3Q2MJR0 410 aa15.86■□□□□ 0.13
HMGN3-203ENST00000620514 OR52E8Q6IFG1 317 aa15.86■□□□□ 0.13
HMGN3-203ENST00000620514 XKRXQ6PP77 449 aa15.86■□□□□ 0.13
HMGN3-203ENST00000620514 LYPD8Q6UX82 237 aa15.86■□□□□ 0.13
HMGN3-203ENST00000620514 TIFABQ6ZNK6 161 aa15.86■□□□□ 0.13
HMGN3-203ENST00000620514 CD163Q86VB7 1156 aa15.86■□□□□ 0.13
HMGN3-203ENST00000620514 GSPT2Q8IYD1 628 aaKnown RBP15.86■□□□□ 0.13
HMGN3-203ENST00000620514 GOLM1Q8NBJ4 401 aa15.86■□□□□ 0.13
HMGN3-203ENST00000620514 FAM57AQ8TBR7 257 aa15.86■□□□□ 0.13
HMGN3-203ENST00000620514 TRPC4APQ8TEL6 797 aa15.86■□□□□ 0.13
HMGN3-203ENST00000620514 RIT1Q92963 219 aa15.86■□□□□ 0.13
HMGN3-203ENST00000620514 ART5Q96L15 291 aa15.86■□□□□ 0.13
HMGN3-203ENST00000620514 SGCZQ96LD1 299 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms