RNA–Protein interactions for RNA: ENST00000619079.1

UPF3A-212, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 2,423 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-212ENST00000619079 TRILQ7L0X0 811 aa10.31□□□□□ -0.76
UPF3A-212ENST00000619079 SCD5Q86SK9 330 aa10.31□□□□□ -0.76
UPF3A-212ENST00000619079 GPR65Q8IYL9 337 aa10.31□□□□□ -0.76
UPF3A-212ENST00000619079 LINC00518Q8N0U6 118 aa10.31□□□□□ -0.76
UPF3A-212ENST00000619079 TAGAPQ8N103 731 aa10.31□□□□□ -0.76
UPF3A-212ENST00000619079 ZNF655Q8N720 491 aaPredicted RBP10.31□□□□□ -0.76
UPF3A-212ENST00000619079 OR52P1PQ8NH57 321 aa10.31□□□□□ -0.76
UPF3A-212ENST00000619079 ST8SIA4Q92187 359 aa10.31□□□□□ -0.76
UPF3A-212ENST00000619079 UFD1Q92890 307 aa10.31□□□□□ -0.76
UPF3A-212ENST00000619079 OTUB1Q96FW1 271 aaPredicted RBP10.31□□□□□ -0.76
UPF3A-212ENST00000619079 APOLD1Q96LR9 279 aa10.31□□□□□ -0.76
UPF3A-212ENST00000619079 OR2M2Q96R28 347 aa10.31□□□□□ -0.76
UPF3A-212ENST00000619079 IL4I1Q96RQ9 567 aa10.31□□□□□ -0.76
UPF3A-212ENST00000619079 DPCDQ9BVM2 203 aaPredicted RBP10.31□□□□□ -0.76
UPF3A-212ENST00000619079 TMEM168Q9H0V1 697 aa10.31□□□□□ -0.76
UPF3A-212ENST00000619079 ACER3Q9NUN7 267 aa10.31□□□□□ -0.76
UPF3A-212ENST00000619079 CACNG4Q9UBN1 327 aa10.31□□□□□ -0.76
UPF3A-212ENST00000619079 BTNL2Q9UIR0 455 aa10.31□□□□□ -0.76
UPF3A-212ENST00000619079 MSRAQ9UJ68 235 aa10.31□□□□□ -0.76
UPF3A-212ENST00000619079 TSR3Q9UJK0 312 aaKnown RBP10.31□□□□□ -0.76
UPF3A-212ENST00000619079 ZNF175Q9Y473 711 aa10.31□□□□□ -0.76
UPF3A-212ENST00000619079 TTC3P53804 2025 aa10.31□□□□□ -0.76
UPF3A-212ENST00000619079 A0A1W2PPL8 197 aa10.31□□□□□ -0.76
UPF3A-212ENST00000619079 IRGMA1A4Y4 181 aa10.31□□□□□ -0.76
UPF3A-212ENST00000619079 SERTM1A2A2V5 107 aa10.31□□□□□ -0.76
UPF3A-212ENST00000619079 KRBOX1C9JBD0 128 aa10.31□□□□□ -0.76
UPF3A-212ENST00000619079 CASKO14936 926 aa10.31□□□□□ -0.76
UPF3A-212ENST00000619079 RAB36O95755 333 aa10.31□□□□□ -0.76
UPF3A-212ENST00000619079 CA3P07451 260 aa10.31□□□□□ -0.76
UPF3A-212ENST00000619079 NR2F6P10588 404 aa10.31□□□□□ -0.76
UPF3A-212ENST00000619079 OR1E1P30953 314 aa10.31□□□□□ -0.76
UPF3A-212ENST00000619079 IRS1P35568 1242 aa10.31□□□□□ -0.76
UPF3A-212ENST00000619079 NUP62P37198 522 aaPredicted RBP10.31□□□□□ -0.76
UPF3A-212ENST00000619079 CBX5P45973 191 aa10.31□□□□□ -0.76
UPF3A-212ENST00000619079 ZNF81P51508 661 aa10.31□□□□□ -0.76
UPF3A-212ENST00000619079 TPMTP51580 245 aa10.31□□□□□ -0.76
UPF3A-212ENST00000619079 P2RY14Q15391 338 aa10.31□□□□□ -0.76
UPF3A-212ENST00000619079 OCLNQ16625 522 aa10.31□□□□□ -0.76
UPF3A-212ENST00000619079 ANXA8L1Q5VT79 327 aa10.31□□□□□ -0.76
UPF3A-212ENST00000619079 NXPE2Q96DL1 559 aa10.31□□□□□ -0.76
UPF3A-212ENST00000619079 SGTBQ96EQ0 304 aa10.31□□□□□ -0.76
UPF3A-212ENST00000619079 C1GALT1C1Q96EU7 318 aa10.31□□□□□ -0.76
UPF3A-212ENST00000619079 PDXPQ96GD0 296 aa10.31□□□□□ -0.76
UPF3A-212ENST00000619079 SCMH1Q96GD3 660 aa10.31□□□□□ -0.76
UPF3A-212ENST00000619079 B3GALT6Q96L58 329 aa10.31□□□□□ -0.76
UPF3A-212ENST00000619079 FCRL1Q96LA6 429 aa10.31□□□□□ -0.76
UPF3A-212ENST00000619079 CASD1Q96PB1 797 aa10.31□□□□□ -0.76
UPF3A-212ENST00000619079 UQCC2Q9BRT2 126 aa10.31□□□□□ -0.76
UPF3A-212ENST00000619079 TSSK6Q9BXA6 273 aa10.31□□□□□ -0.76
UPF3A-212ENST00000619079 ADGRE3Q9BY15 652 aa10.31□□□□□ -0.76
UPF3A-212ENST00000619079 CIPCQ9C0C6 399 aa10.31□□□□□ -0.76
UPF3A-212ENST00000619079 SLC32A1Q9H598 525 aa10.31□□□□□ -0.76
UPF3A-212ENST00000619079 PDFQ9HBH1 243 aa10.31□□□□□ -0.76
UPF3A-212ENST00000619079 DNAJC27Q9NZQ0 273 aa10.31□□□□□ -0.76
UPF3A-212ENST00000619079 SPIN1Q9Y657 262 aaPredicted RBP10.31□□□□□ -0.76
UPF3A-212ENST00000619079 hCG_1807616A0A1W2PRN6 198 aa10.3□□□□□ -0.76
UPF3A-212ENST00000619079 DRGXA6NNA5 263 aa10.3□□□□□ -0.76
UPF3A-212ENST00000619079 HPGDSO60760 199 aa10.3□□□□□ -0.76
UPF3A-212ENST00000619079 SNAPC5O75971 98 aa10.3□□□□□ -0.76
UPF3A-212ENST00000619079 C1QCP02747 245 aa10.3□□□□□ -0.76
UPF3A-212ENST00000619079 ANXA5P08758 320 aa10.3□□□□□ -0.76
UPF3A-212ENST00000619079 NUDT7P0C024 238 aa10.3□□□□□ -0.76
UPF3A-212ENST00000619079 GAAP10253 952 aa10.3□□□□□ -0.76
UPF3A-212ENST00000619079 OSMP13725 252 aa10.3□□□□□ -0.76
UPF3A-212ENST00000619079 HOXB1P14653 301 aaPredicted RBP10.3□□□□□ -0.76
UPF3A-212ENST00000619079 GABRA5P31644 462 aa10.3□□□□□ -0.76
UPF3A-212ENST00000619079 PBX2P40425 430 aa10.3□□□□□ -0.76
UPF3A-212ENST00000619079 MAP2K6P52564 334 aa10.3□□□□□ -0.76
UPF3A-212ENST00000619079 WNT4P56705 351 aa10.3□□□□□ -0.76
UPF3A-212ENST00000619079 ALDH6A1Q02252 535 aaKnown RBP10.3□□□□□ -0.76
UPF3A-212ENST00000619079 BTN1A1Q13410 526 aa10.3□□□□□ -0.76
UPF3A-212ENST00000619079 CDH18Q13634 790 aa10.3□□□□□ -0.76
UPF3A-212ENST00000619079 DSG2Q14126 1118 aa10.3□□□□□ -0.76
UPF3A-212ENST00000619079 ZNF273Q14593 569 aa10.3□□□□□ -0.76
UPF3A-212ENST00000619079 CRTC2Q53ET0 693 aaPredicted RBP10.3□□□□□ -0.76
UPF3A-212ENST00000619079 PLA1AQ53H76 456 aa10.3□□□□□ -0.76
UPF3A-212ENST00000619079 C3orf38Q5JPI3 329 aa10.3□□□□□ -0.76
UPF3A-212ENST00000619079 CLVS2Q5SYC1 327 aa10.3□□□□□ -0.76
UPF3A-212ENST00000619079 HACD4Q5VWC8 232 aa10.3□□□□□ -0.76
UPF3A-212ENST00000619079 FBXL22Q6P050 247 aa10.3□□□□□ -0.76
UPF3A-212ENST00000619079 LRRC70Q7Z2Q7 622 aa10.3□□□□□ -0.76
UPF3A-212ENST00000619079 CRIPAKQ8N1N5 446 aa10.3□□□□□ -0.76
UPF3A-212ENST00000619079 TTLQ8NG68 377 aa10.3□□□□□ -0.76
UPF3A-212ENST00000619079 PTP4A1Q93096 173 aa10.3□□□□□ -0.76
UPF3A-212ENST00000619079 DACT3Q96B18 629 aaPredicted RBP10.3□□□□□ -0.76
UPF3A-212ENST00000619079 OTULINQ96BN8 352 aa10.3□□□□□ -0.76
UPF3A-212ENST00000619079 APIPQ96GX9 242 aa10.3□□□□□ -0.76
UPF3A-212ENST00000619079 COPS8Q99627 209 aa10.3□□□□□ -0.76
UPF3A-212ENST00000619079 TCF25Q9BQ70 676 aa10.3□□□□□ -0.76
UPF3A-212ENST00000619079 WACQ9BTA9 647 aa10.3□□□□□ -0.76
UPF3A-212ENST00000619079 CINPQ9BW66 212 aaPredicted RBP10.3□□□□□ -0.76
UPF3A-212ENST00000619079 PBX4Q9BYU1 374 aa10.3□□□□□ -0.76
UPF3A-212ENST00000619079 GHITMQ9H3K2 345 aa10.3□□□□□ -0.76
UPF3A-212ENST00000619079 ZNF282Q9UDV7 671 aaPredicted RBP10.3□□□□□ -0.76
UPF3A-212ENST00000619079 MALT1Q9UDY8 824 aa10.3□□□□□ -0.76
UPF3A-212ENST00000619079 HCN2Q9UL51 889 aa10.3□□□□□ -0.76
UPF3A-212ENST00000619079 DOCK4Q8N1I0 1966 aa10.3□□□□□ -0.76
UPF3A-212ENST00000619079 A0A1W2PQH9 124 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 C1orf226A1L170 272 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 PIPSLA2A3N6 862 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms