RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-223	ENST00000618944	CXCR2	P25025	360 aa		10.63	□□□□□ -0.71
TP53-223	ENST00000618944	GPC1	P35052	558 aa		10.63	□□□□□ -0.71
TP53-223	ENST00000618944	MAGEA8	P43361	318 aa		10.63	□□□□□ -0.71
TP53-223	ENST00000618944	TAS2R38	P59533	333 aa		10.63	□□□□□ -0.71
TP53-223	ENST00000618944	LSM11	P83369	360 aa	Known RBP eCLIP	10.63	□□□□□ -0.71
TP53-223	ENST00000618944	RPA4	Q13156	261 aa		10.63	□□□□□ -0.71
TP53-223	ENST00000618944	SLC13A2	Q13183	592 aa		10.63	□□□□□ -0.71
TP53-223	ENST00000618944	TST	Q16762	297 aa	Known RBP	10.63	□□□□□ -0.71
TP53-223	ENST00000618944	ZNF750	Q32MQ0	723 aa		10.63	□□□□□ -0.71
TP53-223	ENST00000618944	DCST1	Q5T197	706 aa		10.63	□□□□□ -0.71
TP53-223	ENST00000618944	GET4	Q7L5D6	327 aa	Predicted RBP	10.63	□□□□□ -0.71
TP53-223	ENST00000618944	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	10.63	□□□□□ -0.71
TP53-223	ENST00000618944	WDR36	Q8NI36	951 aa	Known RBP	10.63	□□□□□ -0.71
TP53-223	ENST00000618944	RGMA	Q96B86	450 aa		10.63	□□□□□ -0.71
TP53-223	ENST00000618944	TEFM	Q96QE5	360 aa	Known RBP	10.63	□□□□□ -0.71
TP53-223	ENST00000618944	INSM2	Q96T92	566 aa	Predicted RBP	10.63	□□□□□ -0.71
TP53-223	ENST00000618944	MAPKAP1	Q9BPZ7	522 aa		10.63	□□□□□ -0.71
TP53-223	ENST00000618944	DPH7	Q9BTV6	452 aa		10.63	□□□□□ -0.71
TP53-223	ENST00000618944	MENT	Q9BUN1	341 aa		10.63	□□□□□ -0.71
TP53-223	ENST00000618944	UCK2	Q9BZX2	261 aa		10.63	□□□□□ -0.71
TP53-223	ENST00000618944	A4GALT	Q9NPC4	353 aa		10.63	□□□□□ -0.71
TP53-223	ENST00000618944	CTPS2	Q9NRF8	586 aa		10.63	□□□□□ -0.71
TP53-223	ENST00000618944	SEC14L3	Q9UDX4	400 aa		10.63	□□□□□ -0.71
TP53-223	ENST00000618944	SERGEF	Q9UGK8	458 aa		10.63	□□□□□ -0.71
TP53-223	ENST00000618944	PRAMEF27	A3QJZ7	478 aa		10.62	□□□□□ -0.71
TP53-223	ENST00000618944	METTL15	A6NJ78	407 aa		10.62	□□□□□ -0.71
TP53-223	ENST00000618944	GRXCR1	A8MXD5	290 aa		10.62	□□□□□ -0.71
TP53-223	ENST00000618944	HOXB3	P14651	431 aa	Predicted RBP	10.62	□□□□□ -0.71
TP53-223	ENST00000618944	TGM1	P22735	817 aa		10.62	□□□□□ -0.71
TP53-223	ENST00000618944	DRD3	P35462	400 aa		10.62	□□□□□ -0.71
TP53-223	ENST00000618944	UGT2B10	P36537	528 aa		10.62	□□□□□ -0.71
TP53-223	ENST00000618944	TUBA1B	P68363	451 aa		10.62	□□□□□ -0.71
TP53-223	ENST00000618944	CSNK1G2	P78368	415 aa		10.62	□□□□□ -0.71
TP53-223	ENST00000618944	FAM46C	Q5VWP2	391 aa		10.62	□□□□□ -0.71
TP53-223	ENST00000618944	TANGO2	Q6ICL3	276 aa		10.62	□□□□□ -0.71
TP53-223	ENST00000618944	OR4C11	Q6IEV9	310 aa		10.62	□□□□□ -0.71
TP53-223	ENST00000618944	USP43	Q70EL4	1123 aa		10.62	□□□□□ -0.71
TP53-223	ENST00000618944	TUBA1A	Q71U36	451 aa		10.62	□□□□□ -0.71
TP53-223	ENST00000618944	COMTD1	Q86VU5	262 aa		10.62	□□□□□ -0.71
TP53-223	ENST00000618944	APOBEC4	Q8WW27	367 aa	Known RBP	10.62	□□□□□ -0.71
TP53-223	ENST00000618944	SMARCD2	Q92925	531 aa		10.62	□□□□□ -0.71
TP53-223	ENST00000618944	HDAC8	Q9BY41	377 aa		10.62	□□□□□ -0.71
TP53-223	ENST00000618944	OR51I1	Q9H343	314 aa		10.62	□□□□□ -0.71
TP53-223	ENST00000618944	MVB12B	Q9H7P6	319 aa		10.62	□□□□□ -0.71
TP53-223	ENST00000618944	PELI2	Q9HAT8	420 aa		10.62	□□□□□ -0.71
TP53-223	ENST00000618944	WASH6P	Q9NQA3	447 aa		10.62	□□□□□ -0.71
TP53-223	ENST00000618944	SEMA3G	Q9NS98	782 aa		10.62	□□□□□ -0.71
TP53-223	ENST00000618944	QPCTL	Q9NXS2	382 aa		10.62	□□□□□ -0.71
TP53-223	ENST00000618944	DNAJC27	Q9NZQ0	273 aa		10.62	□□□□□ -0.71
TP53-223	ENST00000618944	TSC22D4	Q9Y3Q8	395 aa		10.62	□□□□□ -0.71
TP53-223	ENST00000618944	LRRK1	Q38SD2	2015 aa		10.62	□□□□□ -0.71
TP53-223	ENST00000618944	IGKV1-8	A0A0C4DH67	115 aa		10.62	□□□□□ -0.71
TP53-223	ENST00000618944		M0R3H8	397 aa		10.62	□□□□□ -0.71
TP53-223	ENST00000618944	TLR4	O00206	839 aa		10.62	□□□□□ -0.71
TP53-223	ENST00000618944	TBX1	O43435	398 aa		10.62	□□□□□ -0.71
TP53-223	ENST00000618944	ERAL1	O75616	437 aa	Known RBP	10.62	□□□□□ -0.71
TP53-223	ENST00000618944	SERPINB7	O75635	380 aa		10.62	□□□□□ -0.71
TP53-223	ENST00000618944	NR2F1	P10589	423 aa		10.62	□□□□□ -0.71
TP53-223	ENST00000618944	TNNI3	P19429	210 aa		10.62	□□□□□ -0.71
TP53-223	ENST00000618944	GTF2E2	P29084	291 aa	Known RBP	10.62	□□□□□ -0.71
TP53-223	ENST00000618944	CD40LG	P29965	261 aa		10.62	□□□□□ -0.71
TP53-223	ENST00000618944	SSR2	P43308	183 aa		10.62	□□□□□ -0.71
TP53-223	ENST00000618944	PPP5C	P53041	499 aa		10.62	□□□□□ -0.71
TP53-223	ENST00000618944	REEP5	Q00765	189 aa		10.62	□□□□□ -0.71
TP53-223	ENST00000618944	TARDBP	Q13148	414 aa	Known RBP eCLIP	10.62	□□□□□ -0.71
TP53-223	ENST00000618944	KRT33B	Q14525	404 aa		10.62	□□□□□ -0.71
TP53-223	ENST00000618944	EIF4H	Q15056	248 aa	Known RBP	10.62	□□□□□ -0.71
TP53-223	ENST00000618944	MLF2	Q15773	248 aa	Predicted RBP	10.62	□□□□□ -0.71
TP53-223	ENST00000618944	NDUFAF5	Q5TEU4	345 aa		10.62	□□□□□ -0.71
TP53-223	ENST00000618944	LINC00299	Q6ZSB3	139 aa		10.62	□□□□□ -0.71
TP53-223	ENST00000618944	NUDT13	Q86X67	352 aa		10.62	□□□□□ -0.71
TP53-223	ENST00000618944	MEX3D	Q86XN8	651 aa	Known RBP	10.62	□□□□□ -0.71
TP53-223	ENST00000618944	SLC30A8	Q8IWU4	369 aa		10.62	□□□□□ -0.71
TP53-223	ENST00000618944	CADM3	Q8N126	398 aa		10.62	□□□□□ -0.71
TP53-223	ENST00000618944	FAM46D	Q8NEK8	389 aa		10.62	□□□□□ -0.71
TP53-223	ENST00000618944	JPH3	Q8WXH2	748 aa	Predicted RBP	10.62	□□□□□ -0.71
TP53-223	ENST00000618944	ZBED6CL	Q96FA7	236 aa	Predicted RBP	10.62	□□□□□ -0.71
TP53-223	ENST00000618944	MGLL	Q99685	303 aa		10.62	□□□□□ -0.71
TP53-223	ENST00000618944	TREX2	Q9BQ50	279 aa	Predicted RBP	10.62	□□□□□ -0.71
TP53-223	ENST00000618944	CDADC1	Q9BWV3	514 aa		10.62	□□□□□ -0.71
TP53-223	ENST00000618944	AICDA	Q9GZX7	198 aa		10.62	□□□□□ -0.71
TP53-223	ENST00000618944	MMP27	Q9H306	513 aa		10.62	□□□□□ -0.71
TP53-223	ENST00000618944	GLIPR2	Q9H4G4	154 aa		10.62	□□□□□ -0.71
TP53-223	ENST00000618944	SACM1L	Q9NTJ5	587 aa		10.62	□□□□□ -0.71
TP53-223	ENST00000618944	REV1	Q9UBZ9	1251 aa		10.62	□□□□□ -0.71
TP53-223	ENST00000618944	CLEC2D	Q9UHP7	191 aa		10.62	□□□□□ -0.71
TP53-223	ENST00000618944	KCND3	Q9UK17	655 aa		10.62	□□□□□ -0.71
TP53-223	ENST00000618944	KLHL20	Q9Y2M5	609 aa		10.62	□□□□□ -0.71
TP53-223	ENST00000618944	MTCL1	Q9Y4B5	1905 aa	Known RBP	10.61	□□□□□ -0.71
TP53-223	ENST00000618944		A0A1W2PP55	124 aa		10.61	□□□□□ -0.71
TP53-223	ENST00000618944	OR52A4P	A6NMU1	304 aa		10.61	□□□□□ -0.71
TP53-223	ENST00000618944		A8MVJ9	347 aa		10.61	□□□□□ -0.71
TP53-223	ENST00000618944	PGRMC2	O15173	223 aa		10.61	□□□□□ -0.71
TP53-223	ENST00000618944	KMO	O15229	486 aa		10.61	□□□□□ -0.71
TP53-223	ENST00000618944	NME6	O75414	186 aa	Predicted RBP	10.61	□□□□□ -0.71
TP53-223	ENST00000618944	SEMA3D	O95025	777 aa		10.61	□□□□□ -0.71
TP53-223	ENST00000618944	RPN2	P04844	631 aa		10.61	□□□□□ -0.71
TP53-223	ENST00000618944	H1F0	P07305	194 aa	Known RBP	10.61	□□□□□ -0.71
TP53-223	ENST00000618944	C8orf89	P0DMQ9	161 aa		10.61	□□□□□ -0.71
TP53-223	ENST00000618944	ERG	P11308	486 aa		10.61	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms