RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 BLKP51451 505 aa16.38■□□□□ 0.21
PCDHGC3-205ENST00000617641 PRKAG1P54619 331 aa16.38■□□□□ 0.21
PCDHGC3-205ENST00000617641 TPD52P55327 224 aaPredicted RBP16.38■□□□□ 0.21
PCDHGC3-205ENST00000617641 RFX4Q33E94 735 aa16.38■□□□□ 0.21
PCDHGC3-205ENST00000617641 CNPY1Q3B7I2 92 aa16.38■□□□□ 0.21
PCDHGC3-205ENST00000617641 DEFB134Q4QY38 66 aa16.38■□□□□ 0.21
PCDHGC3-205ENST00000617641 KDM4DQ6B0I6 523 aa16.38■□□□□ 0.21
PCDHGC3-205ENST00000617641 ZNF438Q7Z4V0 828 aa16.38■□□□□ 0.21
PCDHGC3-205ENST00000617641 THAP5Q7Z6K1 395 aa16.38■□□□□ 0.21
PCDHGC3-205ENST00000617641 NRBF2Q96F24 287 aa16.38■□□□□ 0.21
PCDHGC3-205ENST00000617641 OTUB1Q96FW1 271 aaPredicted RBP16.38■□□□□ 0.21
PCDHGC3-205ENST00000617641 ZFYVE21Q9BQ24 234 aa16.38■□□□□ 0.21
PCDHGC3-205ENST00000617641 ING2Q9H160 280 aa16.38■□□□□ 0.21
PCDHGC3-205ENST00000617641 OR51I1Q9H343 314 aa16.38■□□□□ 0.21
PCDHGC3-205ENST00000617641 ANKMY1Q9P2S6 941 aa16.38■□□□□ 0.21
PCDHGC3-205ENST00000617641 FAM221BA6H8Z2 402 aa16.37■□□□□ 0.21
PCDHGC3-205ENST00000617641 TRIM64A6NGJ6 449 aa16.37■□□□□ 0.21
PCDHGC3-205ENST00000617641 OR12D1P0DN82 309 aa16.37■□□□□ 0.21
PCDHGC3-205ENST00000617641 NR2F6P10588 404 aa16.37■□□□□ 0.21
PCDHGC3-205ENST00000617641 TYRP1P17643 537 aa16.37■□□□□ 0.21
PCDHGC3-205ENST00000617641 RBM44Q6ZP01 1051 aaKnown RBP16.37■□□□□ 0.21
PCDHGC3-205ENST00000617641 Q7L0L9 218 aa16.37■□□□□ 0.21
PCDHGC3-205ENST00000617641 BAHD1Q8TBE0 780 aaPredicted RBP16.37■□□□□ 0.21
PCDHGC3-205ENST00000617641 EPYCQ99645 322 aa16.37■□□□□ 0.21
PCDHGC3-205ENST00000617641 TRPC4Q9UBN4 977 aa16.37■□□□□ 0.21
PCDHGC3-205ENST00000617641 SH3GLB1Q9Y371 365 aa16.37■□□□□ 0.21
PCDHGC3-205ENST00000617641 PCDHGA8Q9Y5G5 932 aa16.37■□□□□ 0.21
PCDHGC3-205ENST00000617641 A0A087WXM4 84 aa16.37■□□□□ 0.21
PCDHGC3-205ENST00000617641 A0A0J9YY10 115 aa16.37■□□□□ 0.21
PCDHGC3-205ENST00000617641 H0YGG7 62 aa16.37■□□□□ 0.21
PCDHGC3-205ENST00000617641 DNAJB6O75190 326 aa16.37■□□□□ 0.21
PCDHGC3-205ENST00000617641 EIF2S1P05198 315 aaKnown RBP16.37■□□□□ 0.21
PCDHGC3-205ENST00000617641 SMIM10L1P0DMW3 83 aa16.37■□□□□ 0.21
PCDHGC3-205ENST00000617641 CYP4B1P13584 511 aa16.37■□□□□ 0.21
PCDHGC3-205ENST00000617641 CSNK2A2P19784 350 aaPredicted RBP16.37■□□□□ 0.21
PCDHGC3-205ENST00000617641 ARF3P61204 181 aaPredicted RBP16.37■□□□□ 0.21
PCDHGC3-205ENST00000617641 TUBA4AP68366 448 aa16.37■□□□□ 0.21
PCDHGC3-205ENST00000617641 DUSP7Q16829 419 aa16.37■□□□□ 0.21
PCDHGC3-205ENST00000617641 TMEM107Q6UX40 140 aa16.37■□□□□ 0.21
PCDHGC3-205ENST00000617641 ARMC8Q8IUR7 673 aa16.37■□□□□ 0.21
PCDHGC3-205ENST00000617641 SIX5Q8N196 739 aa16.37■□□□□ 0.21
PCDHGC3-205ENST00000617641 ATG16L2Q8NAA4 619 aa16.37■□□□□ 0.21
PCDHGC3-205ENST00000617641 PIK3C3Q8NEB9 887 aa16.37■□□□□ 0.21
PCDHGC3-205ENST00000617641 GEMIN6Q8WXD5 167 aaKnown RBP16.37■□□□□ 0.21
PCDHGC3-205ENST00000617641 KLHL6Q8WZ60 621 aa16.37■□□□□ 0.21
PCDHGC3-205ENST00000617641 RSC1A1Q92681 617 aa16.37■□□□□ 0.21
PCDHGC3-205ENST00000617641 SMIM10Q96HG1 83 aa16.37■□□□□ 0.21
PCDHGC3-205ENST00000617641 ZNF300Q96RE9 604 aaPredicted RBP16.37■□□□□ 0.21
PCDHGC3-205ENST00000617641 CDX2Q99626 313 aaPredicted RBP16.37■□□□□ 0.21
PCDHGC3-205ENST00000617641 YIPF4Q9BSR8 244 aa16.37■□□□□ 0.21
PCDHGC3-205ENST00000617641 RIBC2Q9H4K1 309 aa16.37■□□□□ 0.21
PCDHGC3-205ENST00000617641 THSD1Q9NS62 852 aa16.37■□□□□ 0.21
PCDHGC3-205ENST00000617641 ZSCAN32Q9NX65 697 aa16.37■□□□□ 0.21
PCDHGC3-205ENST00000617641 NDUFA13Q9P0J0 144 aa16.37■□□□□ 0.21
PCDHGC3-205ENST00000617641 KIF17Q9P2E2 1029 aa16.37■□□□□ 0.21
PCDHGC3-205ENST00000617641 MRPS2Q9Y399 296 aaKnown RBP16.37■□□□□ 0.21
PCDHGC3-205ENST00000617641 PCDHGB3Q9Y5G1 929 aa16.37■□□□□ 0.21
PCDHGC3-205ENST00000617641 LYVE1Q9Y5Y7 322 aa16.37■□□□□ 0.21
PCDHGC3-205ENST00000617641 A0A1W2PPC1 479 aa16.36■□□□□ 0.21
PCDHGC3-205ENST00000617641 PRAMEF27A3QJZ7 478 aa16.36■□□□□ 0.21
PCDHGC3-205ENST00000617641 METTL12A8MUP2 240 aa16.36■□□□□ 0.21
PCDHGC3-205ENST00000617641 J3KTA2 159 aa16.36■□□□□ 0.21
PCDHGC3-205ENST00000617641 B4GAT1O43505 415 aa16.36■□□□□ 0.21
PCDHGC3-205ENST00000617641 RECKO95980 971 aa16.36■□□□□ 0.21
PCDHGC3-205ENST00000617641 IL7RP16871 459 aa16.36■□□□□ 0.21
PCDHGC3-205ENST00000617641 CD27P26842 260 aa16.36■□□□□ 0.21
PCDHGC3-205ENST00000617641 RXRGP48443 463 aa16.36■□□□□ 0.21
PCDHGC3-205ENST00000617641 STARD6P59095 220 aa16.36■□□□□ 0.21
PCDHGC3-205ENST00000617641 SUZ12Q15022 739 aaKnown RBP16.36■□□□□ 0.21
PCDHGC3-205ENST00000617641 SYPL1Q16563 259 aa16.36■□□□□ 0.21
PCDHGC3-205ENST00000617641 ZC3H12BQ5HYM0 836 aaKnown RBP16.36■□□□□ 0.21
PCDHGC3-205ENST00000617641 CAMKVQ8NCB2 501 aa16.36■□□□□ 0.21
PCDHGC3-205ENST00000617641 XAGE5Q8WWM1 108 aa16.36■□□□□ 0.21
PCDHGC3-205ENST00000617641 ZNF681Q96N22 645 aa16.36■□□□□ 0.21
PCDHGC3-205ENST00000617641 RSPO3Q9BXY4 272 aaPredicted RBP16.36■□□□□ 0.21
PCDHGC3-205ENST00000617641 SEMA3GQ9NS98 782 aa16.36■□□□□ 0.21
PCDHGC3-205ENST00000617641 TMEM74BQ9NUR3 256 aa16.36■□□□□ 0.21
PCDHGC3-205ENST00000617641 EXD2Q9NVH0 621 aa16.36■□□□□ 0.21
PCDHGC3-205ENST00000617641 ZNF451Q9Y4E5 1061 aa16.36■□□□□ 0.21
PCDHGC3-205ENST00000617641 KLK4Q9Y5K2 254 aa16.36■□□□□ 0.21
PCDHGC3-205ENST00000617641 TNFRSF11BO00300 401 aa16.36■□□□□ 0.21
PCDHGC3-205ENST00000617641 SLC28A2O43868 658 aa16.36■□□□□ 0.21
PCDHGC3-205ENST00000617641 BMP10O95393 424 aa16.36■□□□□ 0.21
PCDHGC3-205ENST00000617641 MATN1P21941 496 aa16.36■□□□□ 0.21
PCDHGC3-205ENST00000617641 ALDH3B2P48448 385 aa16.36■□□□□ 0.21
PCDHGC3-205ENST00000617641 MAZP56270 477 aaKnown RBP16.36■□□□□ 0.21
PCDHGC3-205ENST00000617641 SPIBQ01892 262 aa16.36■□□□□ 0.21
PCDHGC3-205ENST00000617641 RUNX2Q13950 521 aa16.36■□□□□ 0.21
PCDHGC3-205ENST00000617641 TMEM64Q6YI46 380 aa16.36■□□□□ 0.21
PCDHGC3-205ENST00000617641 OR9A2Q8NGT5 310 aa16.36■□□□□ 0.21
PCDHGC3-205ENST00000617641 OR52J3Q8NH60 311 aa16.36■□□□□ 0.21
PCDHGC3-205ENST00000617641 TMIGD2Q96BF3 282 aa16.36■□□□□ 0.21
PCDHGC3-205ENST00000617641 THAP11Q96EK4 314 aa16.36■□□□□ 0.21
PCDHGC3-205ENST00000617641 ZNF347Q96SE7 839 aa16.36■□□□□ 0.21
PCDHGC3-205ENST00000617641 GIMAP4Q9NUV9 329 aa16.36■□□□□ 0.21
PCDHGC3-205ENST00000617641 TUBA8Q9NY65 449 aaPredicted RBP16.36■□□□□ 0.21
PCDHGC3-205ENST00000617641 KCMF1Q9P0J7 381 aa16.36■□□□□ 0.21
PCDHGC3-205ENST00000617641 A0A1W2PR77 199 aa16.35■□□□□ 0.21
PCDHGC3-205ENST00000617641 OR5K3A6NET4 321 aa16.35■□□□□ 0.21
PCDHGC3-205ENST00000617641 ZNF860A6NHJ4 632 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms