RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 PDE7AQ13946 482 aa14.63□□□□□ -0.07
PCDHGC3-204ENST00000617222 ZNF385BQ569K4 471 aa14.63□□□□□ -0.07
PCDHGC3-204ENST00000617222 CPTPQ5TA50 214 aa14.63□□□□□ -0.07
PCDHGC3-204ENST00000617222 BROXQ5VW32 411 aa14.63□□□□□ -0.07
PCDHGC3-204ENST00000617222 METTL21CQ5VZV1 264 aa14.63□□□□□ -0.07
PCDHGC3-204ENST00000617222 PAOXQ6QHF9 649 aa14.63□□□□□ -0.07
PCDHGC3-204ENST00000617222 CCDC81Q6ZN84 652 aa14.63□□□□□ -0.07
PCDHGC3-204ENST00000617222 CPEB2Q7Z5Q1 589 aaKnown RBP14.63□□□□□ -0.07
PCDHGC3-204ENST00000617222 MTERF4Q7Z6M4 381 aaKnown RBP14.63□□□□□ -0.07
PCDHGC3-204ENST00000617222 MIER2Q8N344 545 aa14.63□□□□□ -0.07
PCDHGC3-204ENST00000617222 ADAMTS17Q8TE56 1095 aa14.63□□□□□ -0.07
PCDHGC3-204ENST00000617222 MTERF3Q96E29 417 aa14.63□□□□□ -0.07
PCDHGC3-204ENST00000617222 RBM18Q96H35 190 aaKnown RBP14.63□□□□□ -0.07
PCDHGC3-204ENST00000617222 TEX37Q96LM6 180 aa14.63□□□□□ -0.07
PCDHGC3-204ENST00000617222 ZNF681Q96N22 645 aa14.63□□□□□ -0.07
PCDHGC3-204ENST00000617222 DGAT2Q96PD7 388 aa14.63□□□□□ -0.07
PCDHGC3-204ENST00000617222 BBS4Q96RK4 519 aa14.63□□□□□ -0.07
PCDHGC3-204ENST00000617222 PRPF18Q99633 342 aaKnown RBP14.63□□□□□ -0.07
PCDHGC3-204ENST00000617222 SDR39U1Q9NRG7 319 aaPredicted RBP14.63□□□□□ -0.07
PCDHGC3-204ENST00000617222 GIMAP4Q9NUV9 329 aa14.63□□□□□ -0.07
PCDHGC3-204ENST00000617222 MAPRE3Q9UPY8 281 aa14.63□□□□□ -0.07
PCDHGC3-204ENST00000617222 COPG1Q9Y678 874 aaKnown RBP14.63□□□□□ -0.07
PCDHGC3-204ENST00000617222 SCN2AQ99250 2005 aa14.63□□□□□ -0.07
PCDHGC3-204ENST00000617222 LOC102723996A0A087X1L8 192 aa14.62□□□□□ -0.07
PCDHGC3-204ENST00000617222 C9JVG2 144 aa14.62□□□□□ -0.07
PCDHGC3-204ENST00000617222 PEX12O00623 359 aa14.62□□□□□ -0.07
PCDHGC3-204ENST00000617222 PCDH17O14917 1159 aa14.62□□□□□ -0.07
PCDHGC3-204ENST00000617222 OR10H2O60403 315 aa14.62□□□□□ -0.07
PCDHGC3-204ENST00000617222 TBX19O60806 448 aa14.62□□□□□ -0.07
PCDHGC3-204ENST00000617222 SLC22A3O75751 556 aa14.62□□□□□ -0.07
PCDHGC3-204ENST00000617222 SLC35E2P0CK97 266 aa14.62□□□□□ -0.07
PCDHGC3-204ENST00000617222 LAMP1P11279 417 aa14.62□□□□□ -0.07
PCDHGC3-204ENST00000617222 PORP16435 677 aaPredicted RBP14.62□□□□□ -0.07
PCDHGC3-204ENST00000617222 CSNK2A2P19784 350 aaPredicted RBP14.62□□□□□ -0.07
PCDHGC3-204ENST00000617222 IL12AP29459 219 aa14.62□□□□□ -0.07
PCDHGC3-204ENST00000617222 C21orf58P58505 322 aa14.62□□□□□ -0.07
PCDHGC3-204ENST00000617222 DUSP2Q05923 314 aa14.62□□□□□ -0.07
PCDHGC3-204ENST00000617222 PGS1Q32NB8 556 aa14.62□□□□□ -0.07
PCDHGC3-204ENST00000617222 PIGWQ7Z7B1 504 aa14.62□□□□□ -0.07
PCDHGC3-204ENST00000617222 MRGPREQ86SM8 312 aa14.62□□□□□ -0.07
PCDHGC3-204ENST00000617222 CCDC116Q8IYX3 515 aa14.62□□□□□ -0.07
PCDHGC3-204ENST00000617222 ZSCAN1Q8NBB4 408 aa14.62□□□□□ -0.07
PCDHGC3-204ENST00000617222 C7orf57Q8NEG2 295 aa14.62□□□□□ -0.07
PCDHGC3-204ENST00000617222 OR11G2Q8NGC1 345 aa14.62□□□□□ -0.07
PCDHGC3-204ENST00000617222 DOK4Q8TEW6 326 aa14.62□□□□□ -0.07
PCDHGC3-204ENST00000617222 NACC2Q96BF6 587 aa14.62□□□□□ -0.07
PCDHGC3-204ENST00000617222 CNRIP1Q96F85 164 aaPredicted RBP14.62□□□□□ -0.07
PCDHGC3-204ENST00000617222 ZBTB18Q99592 522 aa14.62□□□□□ -0.07
PCDHGC3-204ENST00000617222 P4HTMQ9NXG6 502 aa14.62□□□□□ -0.07
PCDHGC3-204ENST00000617222 ZIM2Q9NZV7 527 aa14.62□□□□□ -0.07
PCDHGC3-204ENST00000617222 CCDC88CQ9P219 2028 aa14.62□□□□□ -0.07
PCDHGC3-204ENST00000617222 ENTPD4Q9Y227 616 aa14.62□□□□□ -0.07
PCDHGC3-204ENST00000617222 WDFY3Q8IZQ1 3526 aa14.61□□□□□ -0.07
PCDHGC3-204ENST00000617222 A0A087WV48 116 aa14.61□□□□□ -0.07
PCDHGC3-204ENST00000617222 SEC24DO94855 1032 aaPredicted RBP14.61□□□□□ -0.07
PCDHGC3-204ENST00000617222 COX6A1P12074 109 aa14.61□□□□□ -0.07
PCDHGC3-204ENST00000617222 DDX5P17844 614 aaKnown RBP14.61□□□□□ -0.07
PCDHGC3-204ENST00000617222 GPX3P22352 226 aa14.61□□□□□ -0.07
PCDHGC3-204ENST00000617222 STT3AP46977 705 aa14.61□□□□□ -0.07
PCDHGC3-204ENST00000617222 ATP4BP51164 291 aa14.61□□□□□ -0.07
PCDHGC3-204ENST00000617222 CLNS1AP54105 237 aaKnown RBP14.61□□□□□ -0.07
PCDHGC3-204ENST00000617222 PLIN5Q00G26 463 aa14.61□□□□□ -0.07
PCDHGC3-204ENST00000617222 CDC20Q12834 499 aa14.61□□□□□ -0.07
PCDHGC3-204ENST00000617222 ATP1A4Q13733 1029 aa14.61□□□□□ -0.07
PCDHGC3-204ENST00000617222 SQLEQ14534 574 aa14.61□□□□□ -0.07
PCDHGC3-204ENST00000617222 MPEG1Q2M385 716 aa14.61□□□□□ -0.07
PCDHGC3-204ENST00000617222 PAPD4Q6PIY7 484 aaKnown RBP14.61□□□□□ -0.07
PCDHGC3-204ENST00000617222 DGAT2L6Q6ZPD8 337 aa14.61□□□□□ -0.07
PCDHGC3-204ENST00000617222 NDUFAF7Q7L592 441 aa14.61□□□□□ -0.07
PCDHGC3-204ENST00000617222 SAMD14Q8IZD0 417 aaPredicted RBP14.61□□□□□ -0.07
PCDHGC3-204ENST00000617222 ST13P4Q8IZP2 240 aaPredicted RBP14.61□□□□□ -0.07
PCDHGC3-204ENST00000617222 OR9I1Q8NGQ6 314 aa14.61□□□□□ -0.07
PCDHGC3-204ENST00000617222 CIDECQ96AQ7 238 aaPredicted RBP14.61□□□□□ -0.07
PCDHGC3-204ENST00000617222 COQ8BQ96D53 544 aa14.61□□□□□ -0.07
PCDHGC3-204ENST00000617222 ZNF764Q96H86 408 aaPredicted RBP14.61□□□□□ -0.07
PCDHGC3-204ENST00000617222 VPS50Q96JG6 964 aa14.61□□□□□ -0.07
PCDHGC3-204ENST00000617222 IP6K3Q96PC2 410 aa14.61□□□□□ -0.07
PCDHGC3-204ENST00000617222 WDR77Q9BQA1 342 aaPredicted RBP14.61□□□□□ -0.07
PCDHGC3-204ENST00000617222 ZNF700Q9H0M5 742 aa14.61□□□□□ -0.07
PCDHGC3-204ENST00000617222 CLMPQ9H6B4 373 aa14.61□□□□□ -0.07
PCDHGC3-204ENST00000617222 ADAP2Q9NPF8 381 aa14.61□□□□□ -0.07
PCDHGC3-204ENST00000617222 IGF2RP11717 2491 aa14.6□□□□□ -0.07
PCDHGC3-204ENST00000617222 IGHV1-45A0A0A0MS14 117 aa14.6□□□□□ -0.07
PCDHGC3-204ENST00000617222 SYNDIG1LA6NDD5 238 aa14.6□□□□□ -0.07
PCDHGC3-204ENST00000617222 MYO1GB0I1T2 1018 aa14.6□□□□□ -0.07
PCDHGC3-204ENST00000617222 C17orf105B2RV13 164 aa14.6□□□□□ -0.07
PCDHGC3-204ENST00000617222 MASP2O00187 686 aa14.6□□□□□ -0.07
PCDHGC3-204ENST00000617222 PDPK1O15530 556 aa14.6□□□□□ -0.07
PCDHGC3-204ENST00000617222 FAM107AO95990 144 aa14.6□□□□□ -0.07
PCDHGC3-204ENST00000617222 EFNA1P20827 205 aaPredicted RBP14.6□□□□□ -0.07
PCDHGC3-204ENST00000617222 NT5EP21589 574 aa14.6□□□□□ -0.07
PCDHGC3-204ENST00000617222 NTSP30990 170 aa14.6□□□□□ -0.07
PCDHGC3-204ENST00000617222 S100A3P33764 101 aa14.6□□□□□ -0.07
PCDHGC3-204ENST00000617222 MPIP34949 423 aa14.6□□□□□ -0.07
PCDHGC3-204ENST00000617222 PTGER1P34995 402 aa14.6□□□□□ -0.07
PCDHGC3-204ENST00000617222 MRPL19P49406 292 aaKnown RBP14.6□□□□□ -0.07
PCDHGC3-204ENST00000617222 NCBP2P52298 156 aaKnown RBP eCLIP14.6□□□□□ -0.07
PCDHGC3-204ENST00000617222 DGKQP52824 942 aa14.6□□□□□ -0.07
PCDHGC3-204ENST00000617222 IRX1P78414 480 aaPredicted RBP14.6□□□□□ -0.07
PCDHGC3-204ENST00000617222 SRSF11Q05519 484 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms