RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 MFSD4BQ5TF39 518 aa16.43■□□□□ 0.22
TRAPPC3-209ENST00000616395 EPGNQ6UW88 154 aa16.43■□□□□ 0.22
TRAPPC3-209ENST00000616395 SHISA5Q8N114 240 aa16.43■□□□□ 0.22
TRAPPC3-209ENST00000616395 ARHGEF39Q8N4T4 335 aa16.43■□□□□ 0.22
TRAPPC3-209ENST00000616395 PPFIBP2Q8ND30 876 aa16.43■□□□□ 0.22
TRAPPC3-209ENST00000616395 AGR3Q8TD06 166 aa16.43■□□□□ 0.22
TRAPPC3-209ENST00000616395 DPH7Q9BTV6 452 aa16.43■□□□□ 0.22
TRAPPC3-209ENST00000616395 GSTO2Q9H4Y5 243 aa16.43■□□□□ 0.22
TRAPPC3-209ENST00000616395 ZNF395Q9H8N7 513 aaPredicted RBP16.43■□□□□ 0.22
TRAPPC3-209ENST00000616395 TCF7L2Q9NQB0 619 aa16.43■□□□□ 0.22
TRAPPC3-209ENST00000616395 RASSF1Q9NS23 344 aa16.43■□□□□ 0.22
TRAPPC3-209ENST00000616395 UTP6Q9NYH9 597 aaKnown RBP16.43■□□□□ 0.22
TRAPPC3-209ENST00000616395 TRAF6Q9Y4K3 522 aa16.43■□□□□ 0.22
TRAPPC3-209ENST00000616395 FN1P02751 2386 aaKnown RBP16.42■□□□□ 0.22
TRAPPC3-209ENST00000616395 JMJD1CQ15652 2540 aa16.42■□□□□ 0.22
TRAPPC3-209ENST00000616395 OR2W5A6NFC9 320 aa16.42■□□□□ 0.22
TRAPPC3-209ENST00000616395 TFECO14948 347 aaPredicted RBP16.42■□□□□ 0.22
TRAPPC3-209ENST00000616395 HEXAP06865 529 aa16.42■□□□□ 0.22
TRAPPC3-209ENST00000616395 CHRNGP07510 517 aa16.42■□□□□ 0.22
TRAPPC3-209ENST00000616395 FGF4P08620 206 aa16.42■□□□□ 0.22
TRAPPC3-209ENST00000616395 RPS17P08708 135 aaKnown RBP16.42■□□□□ 0.22
TRAPPC3-209ENST00000616395 SERPINB3P29508 390 aa16.42■□□□□ 0.22
TRAPPC3-209ENST00000616395 RFC3P40938 356 aa16.42■□□□□ 0.22
TRAPPC3-209ENST00000616395 KCNC1P48547 511 aa16.42■□□□□ 0.22
TRAPPC3-209ENST00000616395 IDH3AP50213 366 aa16.42■□□□□ 0.22
TRAPPC3-209ENST00000616395 TSTA3Q13630 321 aaPredicted RBP16.42■□□□□ 0.22
TRAPPC3-209ENST00000616395 EXT1Q16394 746 aa16.42■□□□□ 0.22
TRAPPC3-209ENST00000616395 MINDY4Q4G0A6 757 aa16.42■□□□□ 0.22
TRAPPC3-209ENST00000616395 SUSD1Q6UWL2 747 aa16.42■□□□□ 0.22
TRAPPC3-209ENST00000616395 SBSNQ6UWP8 590 aa16.42■□□□□ 0.22
TRAPPC3-209ENST00000616395 CAMKMTQ7Z624 323 aa16.42■□□□□ 0.22
TRAPPC3-209ENST00000616395 CDC20BQ86Y33 519 aa16.42■□□□□ 0.22
TRAPPC3-209ENST00000616395 SLC5A8Q8N695 610 aa16.42■□□□□ 0.22
TRAPPC3-209ENST00000616395 M1APQ8TC57 530 aa16.42■□□□□ 0.22
TRAPPC3-209ENST00000616395 ASB11Q8WXH4 323 aa16.42■□□□□ 0.22
TRAPPC3-209ENST00000616395 PKP4Q99569 1192 aa16.42■□□□□ 0.22
TRAPPC3-209ENST00000616395 ACAT2Q9BWD1 397 aa16.42■□□□□ 0.22
TRAPPC3-209ENST00000616395 MMP25Q9NPA2 562 aa16.42■□□□□ 0.22
TRAPPC3-209ENST00000616395 MID1IP1Q9NPA3 183 aa16.42■□□□□ 0.22
TRAPPC3-209ENST00000616395 ABCF3Q9NUQ8 709 aa16.42■□□□□ 0.22
TRAPPC3-209ENST00000616395 C19orf25Q9UFG5 118 aaPredicted RBP16.42■□□□□ 0.22
TRAPPC3-209ENST00000616395 ADAMTS6Q9UKP5 1117 aa16.42■□□□□ 0.22
TRAPPC3-209ENST00000616395 HRNRQ86YZ3 2850 aaPredicted RBP16.41■□□□□ 0.22
TRAPPC3-209ENST00000616395 FBN1P35555 2871 aaKnown RBP16.41■□□□□ 0.22
TRAPPC3-209ENST00000616395 A0A1W2PPV9 198 aa16.41■□□□□ 0.22
TRAPPC3-209ENST00000616395 AZIN1O14977 448 aa16.41■□□□□ 0.22
TRAPPC3-209ENST00000616395 GUCA1CO95843 209 aa16.41■□□□□ 0.22
TRAPPC3-209ENST00000616395 SNRPNP63162 240 aaKnown RBP16.41■□□□□ 0.22
TRAPPC3-209ENST00000616395 SNTB1Q13884 538 aaKnown RBP16.41■□□□□ 0.22
TRAPPC3-209ENST00000616395 CMPK2Q5EBM0 449 aa16.41■□□□□ 0.22
TRAPPC3-209ENST00000616395 EMC4Q5J8M3 183 aa16.41■□□□□ 0.22
TRAPPC3-209ENST00000616395 GARNL3Q5VVW2 1013 aa16.41■□□□□ 0.22
TRAPPC3-209ENST00000616395 FAM91A1Q658Y4 838 aa16.41■□□□□ 0.22
TRAPPC3-209ENST00000616395 NXNQ6DKJ4 435 aa16.41■□□□□ 0.22
TRAPPC3-209ENST00000616395 CYHR1Q6ZMK1 362 aa16.41■□□□□ 0.22
TRAPPC3-209ENST00000616395 MBOAT1Q6ZNC8 495 aa16.41■□□□□ 0.22
TRAPPC3-209ENST00000616395 LRRC70Q7Z2Q7 622 aa16.41■□□□□ 0.22
TRAPPC3-209ENST00000616395 ANKRD37Q7Z713 158 aa16.41■□□□□ 0.22
TRAPPC3-209ENST00000616395 ZNF227Q86WZ6 799 aa16.41■□□□□ 0.22
TRAPPC3-209ENST00000616395 RAB42Q8N4Z0 105 aa16.41■□□□□ 0.22
TRAPPC3-209ENST00000616395 FITM2Q8N6M3 262 aa16.41■□□□□ 0.22
TRAPPC3-209ENST00000616395 OR9A1PQ8NGU1 263 aa16.41■□□□□ 0.22
TRAPPC3-209ENST00000616395 CEP70Q8NHQ1 597 aa16.41■□□□□ 0.22
TRAPPC3-209ENST00000616395 TRPC4APQ8TEL6 797 aa16.41■□□□□ 0.22
TRAPPC3-209ENST00000616395 ZNF483Q8TF39 744 aaPredicted RBP16.41■□□□□ 0.22
TRAPPC3-209ENST00000616395 UBTD2Q8WUN7 234 aa16.41■□□□□ 0.22
TRAPPC3-209ENST00000616395 CD244Q9BZW8 370 aa16.41■□□□□ 0.22
TRAPPC3-209ENST00000616395 MYLK2Q9H1R3 596 aa16.41■□□□□ 0.22
TRAPPC3-209ENST00000616395 CDCP1Q9H5V8 836 aa16.41■□□□□ 0.22
TRAPPC3-209ENST00000616395 ZDHHC2Q9UIJ5 367 aa16.41■□□□□ 0.22
TRAPPC3-209ENST00000616395 K7EPI3 171 aa16.4■□□□□ 0.22
TRAPPC3-209ENST00000616395 MYO1CO00159 1063 aa16.4■□□□□ 0.22
TRAPPC3-209ENST00000616395 FCHO1O14526 889 aa16.4■□□□□ 0.22
TRAPPC3-209ENST00000616395 SLC22A2O15244 555 aa16.4■□□□□ 0.22
TRAPPC3-209ENST00000616395 HS6ST1O60243 411 aa16.4■□□□□ 0.22
TRAPPC3-209ENST00000616395 CCNT2O60583 730 aaKnown RBP16.4■□□□□ 0.22
TRAPPC3-209ENST00000616395 STK16O75716 305 aa16.4■□□□□ 0.22
TRAPPC3-209ENST00000616395 UBOX5O94941 541 aa16.4■□□□□ 0.22
TRAPPC3-209ENST00000616395 ESRRBO95718 433 aa16.4■□□□□ 0.22
TRAPPC3-209ENST00000616395 ENO1P06733 434 aaKnown RBP16.4■□□□□ 0.22
TRAPPC3-209ENST00000616395 UROSP10746 265 aa16.4■□□□□ 0.22
TRAPPC3-209ENST00000616395 EPB42P16452 691 aa16.4■□□□□ 0.22
TRAPPC3-209ENST00000616395 NCF2P19878 526 aaPredicted RBP16.4■□□□□ 0.22
TRAPPC3-209ENST00000616395 CCNG1P51959 295 aa16.4■□□□□ 0.22
TRAPPC3-209ENST00000616395 GTF2H2Q13888 395 aa16.4■□□□□ 0.22
TRAPPC3-209ENST00000616395 KRT72Q14CN4 511 aa16.4■□□□□ 0.22
TRAPPC3-209ENST00000616395 PPP1R3AQ16821 1122 aa16.4■□□□□ 0.22
TRAPPC3-209ENST00000616395 GTF2H2CQ6P1K8 395 aa16.4■□□□□ 0.22
TRAPPC3-209ENST00000616395 ARSKQ6UWY0 536 aa16.4■□□□□ 0.22
TRAPPC3-209ENST00000616395 GPRIN3Q6ZVF9 776 aa16.4■□□□□ 0.22
TRAPPC3-209ENST00000616395 CLNKQ7Z7G1 428 aa16.4■□□□□ 0.22
TRAPPC3-209ENST00000616395 GOT1L1Q8NHS2 421 aaPredicted RBP16.4■□□□□ 0.22
TRAPPC3-209ENST00000616395 HMGCLL1Q8TB92 370 aa16.4■□□□□ 0.22
TRAPPC3-209ENST00000616395 CCDC138Q96M89 665 aa16.4■□□□□ 0.22
TRAPPC3-209ENST00000616395 ZNF382Q96SR6 550 aa16.4■□□□□ 0.22
TRAPPC3-209ENST00000616395 SEMA4BQ9NPR2 832 aaPredicted RBP16.4■□□□□ 0.22
TRAPPC3-209ENST00000616395 SPATA7Q9P0W8 599 aa16.4■□□□□ 0.22
TRAPPC3-209ENST00000616395 PTBP2Q9UKA9 531 aaKnown RBP16.4■□□□□ 0.22
TRAPPC3-209ENST00000616395 PCTPQ9UKL6 214 aa16.4■□□□□ 0.22
TRAPPC3-209ENST00000616395 SCN2AQ99250 2005 aa16.39■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms