RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-231	ENST00000616390	FUOM	A2VDF0	154 aa		13.2	□□□□□ -0.3
CACNA1C-231	ENST00000616390	NOTO	A8MTQ0	251 aa		13.2	□□□□□ -0.3
CACNA1C-231	ENST00000616390	VEGFD	O43915	354 aa		13.2	□□□□□ -0.3
CACNA1C-231	ENST00000616390	DNAJB5	O75953	348 aa		13.2	□□□□□ -0.3
CACNA1C-231	ENST00000616390	IFNW1	P05000	195 aa		13.2	□□□□□ -0.3
CACNA1C-231	ENST00000616390	ANXA8	P13928	327 aa		13.2	□□□□□ -0.3
CACNA1C-231	ENST00000616390	RPL3	P39023	403 aa	Known RBP	13.2	□□□□□ -0.3
CACNA1C-231	ENST00000616390	LIM2	P55344	173 aa		13.2	□□□□□ -0.3
CACNA1C-231	ENST00000616390	CDK3	Q00526	305 aa		13.2	□□□□□ -0.3
CACNA1C-231	ENST00000616390	PUM1	Q14671	1186 aa	Known RBP eCLIP	13.2	□□□□□ -0.3
CACNA1C-231	ENST00000616390	WSCD2	Q2TBF2	565 aa		13.2	□□□□□ -0.3
CACNA1C-231	ENST00000616390	GAB4	Q2WGN9	574 aa		13.2	□□□□□ -0.3
CACNA1C-231	ENST00000616390	REEP3	Q6NUK4	255 aa		13.2	□□□□□ -0.3
CACNA1C-231	ENST00000616390	OR4C15	Q8NGM1	316 aa		13.2	□□□□□ -0.3
CACNA1C-231	ENST00000616390	GANC	Q8TET4	914 aa		13.2	□□□□□ -0.3
CACNA1C-231	ENST00000616390	SETD7	Q8WTS6	366 aa	Known RBP	13.2	□□□□□ -0.3
CACNA1C-231	ENST00000616390	XAGE5	Q8WWM1	108 aa		13.2	□□□□□ -0.3
CACNA1C-231	ENST00000616390	JPH3	Q8WXH2	748 aa	Predicted RBP	13.2	□□□□□ -0.3
CACNA1C-231	ENST00000616390	TM4SF18	Q96CE8	201 aa		13.2	□□□□□ -0.3
CACNA1C-231	ENST00000616390	TMEM19	Q96HH6	336 aa		13.2	□□□□□ -0.3
CACNA1C-231	ENST00000616390	C17orf62	Q9BQA9	187 aa		13.2	□□□□□ -0.3
CACNA1C-231	ENST00000616390	AIF1L	Q9BQI0	150 aa		13.2	□□□□□ -0.3
CACNA1C-231	ENST00000616390	DCSTAMP	Q9H295	470 aa		13.2	□□□□□ -0.3
CACNA1C-231	ENST00000616390	IGFLR1	Q9H665	355 aa		13.2	□□□□□ -0.3
CACNA1C-231	ENST00000616390	PRSS16	Q9NQE7	514 aa		13.2	□□□□□ -0.3
CACNA1C-231	ENST00000616390	NECTIN3	Q9NQS3	549 aa		13.2	□□□□□ -0.3
CACNA1C-231	ENST00000616390	TRPC4	Q9UBN4	977 aa		13.2	□□□□□ -0.3
CACNA1C-231	ENST00000616390	PSORS1C1	Q9UIG5	152 aa		13.2	□□□□□ -0.3
CACNA1C-231	ENST00000616390	GON4L	Q3T8J9	2241 aa		13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	CLCA1	A8K7I4	914 aa		13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390		M0R082	166 aa		13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	PDPK1	O15530	556 aa		13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	SULT1C4	O75897	302 aa		13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	IFNA14	P01570	189 aa		13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	UQCRC2	P22695	453 aa		13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	ACVR2A	P27037	513 aa		13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	TGFBR2	P37173	567 aa		13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	SERPINB10	P48595	397 aa		13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	CD83	Q01151	205 aa		13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	IFITM3	Q01628	133 aa		13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	EEF1A2	Q05639	463 aa	Known RBP	13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	DPT	Q07507	201 aa		13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	KRT33B	Q14525	404 aa		13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	ARMC4	Q5T2S8	1044 aa		13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	KLHL17	Q6TDP4	642 aa		13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	LCTL	Q6UWM7	567 aa		13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	C6orf120	Q7Z4R8	191 aa		13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	DNAJC22	Q8N4W6	341 aa		13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	ZNF784	Q8NCA9	323 aa	Predicted RBP	13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	RHOXF1	Q8NHV9	184 aa		13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	PSMA8	Q8TAA3	256 aa		13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	DYNC2LI1	Q8TCX1	351 aa		13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	MYDGF	Q969H8	173 aa		13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	C12orf66	Q96MD2	445 aa		13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	TMEM38A	Q9H6F2	299 aa		13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	NMNAT1	Q9HAN9	279 aa	Predicted RBP	13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	TBCCD1	Q9NVR7	557 aa		13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	SERGEF	Q9UGK8	458 aa		13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	C1QTNF3-AMACR	E9PGA6	284 aa		13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	TMPRSS11D	O60235	418 aa		13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	CBFA2T3	O75081	653 aa		13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	NME6	O75414	186 aa	Predicted RBP	13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	ERAL1	O75616	437 aa	Known RBP	13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	SERPINB7	O75635	380 aa		13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	PTH	P01270	115 aa		13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	SLC35G4	P0C7Q5	338 aa		13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	ARAF	P10398	606 aa		13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	GRK5	P34947	590 aa		13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	GPC1	P35052	558 aa		13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	XCR1	P46094	333 aa		13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	RBBP4	Q09028	425 aa		13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	MED22	Q15528	200 aa		13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	METTL11B	Q5VVY1	283 aa		13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	PTCHD4	Q6ZW05	846 aa		13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	LSMEM1	Q8N8F7	131 aa		13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	OR5K2	Q8NHB8	316 aa		13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	ZNF675	Q8TD23	568 aa		13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	CHCHD6	Q9BRQ6	235 aa		13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	OR51E2	Q9H255	320 aa		13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	TMEM245	Q9H330	911 aa		13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	KLHL20	Q9Y2M5	609 aa		13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	HCN4	Q9Y3Q4	1203 aa		13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	MDC1	Q14676	2089 aa	Known RBP	13.19	□□□□□ -0.3
CACNA1C-231	ENST00000616390	VCAN	P13611	3396 aa		13.18	□□□□□ -0.3
CACNA1C-231	ENST00000616390	PRUNE2	Q8WUY3	3088 aa		13.18	□□□□□ -0.3
CACNA1C-231	ENST00000616390	OR52A4P	A6NMU1	304 aa		13.18	□□□□□ -0.3
CACNA1C-231	ENST00000616390		H0YC42	278 aa		13.18	□□□□□ -0.3
CACNA1C-231	ENST00000616390		H3BN98	237 aa		13.18	□□□□□ -0.3
CACNA1C-231	ENST00000616390	HOXB3	P14651	431 aa	Predicted RBP	13.18	□□□□□ -0.3
CACNA1C-231	ENST00000616390	DDC	P20711	480 aa		13.18	□□□□□ -0.3
CACNA1C-231	ENST00000616390	MAG	P20916	626 aa		13.18	□□□□□ -0.3
CACNA1C-231	ENST00000616390	MAT2A	P31153	395 aa	Known RBP	13.18	□□□□□ -0.3
CACNA1C-231	ENST00000616390	CNR2	P34972	360 aa		13.18	□□□□□ -0.3
CACNA1C-231	ENST00000616390	RXRG	P48443	463 aa		13.18	□□□□□ -0.3
CACNA1C-231	ENST00000616390	SEC13	P55735	322 aa		13.18	□□□□□ -0.3
CACNA1C-231	ENST00000616390	RPS3A	P61247	264 aa	Known RBP	13.18	□□□□□ -0.3
CACNA1C-231	ENST00000616390	CRB2	Q5IJ48	1285 aa		13.18	□□□□□ -0.3
CACNA1C-231	ENST00000616390	TANGO2	Q6ICL3	276 aa		13.18	□□□□□ -0.3
CACNA1C-231	ENST00000616390	ARMC8	Q8IUR7	673 aa		13.18	□□□□□ -0.3
CACNA1C-231	ENST00000616390	B3GNT7	Q8NFL0	401 aa		13.18	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 48 ms