RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 NXPE1Q8N323 547 aa12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 METTL2AQ96IZ6 378 aaKnown RBP12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 TSSK6Q9BXA6 273 aa12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 SAV1Q9H4B6 383 aaPredicted RBP12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 SGK2Q9HBY8 427 aa12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 NUDT15Q9NV35 164 aa12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 TDRD15B5MCY1 1934 aaKnown RBP12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 PRAMEF4O60810 478 aa12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 VNN2O95498 520 aa12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 PTGER1P34995 402 aa12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 SPAM1P38567 509 aa12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 RPS25P62851 125 aaKnown RBP12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 PRKCZQ05513 592 aa12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 RING1Q06587 406 aa12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 AANATQ16613 207 aa12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 LRIF1Q5T3J3 769 aa12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 PRAMEF9Q5VWM5 478 aa12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 RASSF6Q6ZTQ3 369 aa12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 USP45Q70EL2 814 aa12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 KANSL1Q7Z3B3 1105 aa12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 TMPRSS11BQ86T26 416 aa12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 C11orf65Q8NCR3 313 aa12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 SLC25A46Q96AG3 418 aa12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 RAD9AQ99638 391 aa12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 TMEM245Q9H330 911 aa12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 BRD9Q9H8M2 597 aa12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 GON4LQ3T8J9 2241 aa12.78□□□□□ -0.36
PCDHA11-202ENST00000616325 TMEM202A6NGA9 273 aa12.77□□□□□ -0.36
PCDHA11-202ENST00000616325 AKAP8O43823 692 aaKnown RBP12.77□□□□□ -0.36
PCDHA11-202ENST00000616325 TGFB1P01137 390 aa12.77□□□□□ -0.36
PCDHA11-202ENST00000616325 ZNF30P17039 623 aa12.77□□□□□ -0.36
PCDHA11-202ENST00000616325 EPORP19235 508 aa12.77□□□□□ -0.36
PCDHA11-202ENST00000616325 LHCGRP22888 699 aa12.77□□□□□ -0.36
PCDHA11-202ENST00000616325 PTPN6P29350 595 aa12.77□□□□□ -0.36
PCDHA11-202ENST00000616325 NNMTP40261 264 aa12.77□□□□□ -0.36
PCDHA11-202ENST00000616325 ALDH9A1P49189 494 aa12.77□□□□□ -0.36
PCDHA11-202ENST00000616325 CRISP1P54107 249 aa12.77□□□□□ -0.36
PCDHA11-202ENST00000616325 GAB1Q13480 694 aa12.77□□□□□ -0.36
PCDHA11-202ENST00000616325 EXOSC2Q13868 293 aaKnown RBP12.77□□□□□ -0.36
PCDHA11-202ENST00000616325 ANGPT1Q15389 498 aa12.77□□□□□ -0.36
PCDHA11-202ENST00000616325 IFI44LQ53G44 452 aa12.77□□□□□ -0.36
PCDHA11-202ENST00000616325 KIAA1324Q6UXG2 1013 aaKnown RBP12.77□□□□□ -0.36
PCDHA11-202ENST00000616325 IL20RBQ6UXL0 311 aa12.77□□□□□ -0.36
PCDHA11-202ENST00000616325 WDR53Q7Z5U6 358 aaPredicted RBP12.77□□□□□ -0.36
PCDHA11-202ENST00000616325 SGIP1Q9BQI5 828 aa12.77□□□□□ -0.36
PCDHA11-202ENST00000616325 SPRTNQ9H040 489 aaPredicted RBP12.77□□□□□ -0.36
PCDHA11-202ENST00000616325 SAP130Q9H0E3 1048 aa12.77□□□□□ -0.36
PCDHA11-202ENST00000616325 B3GAT2Q9NPZ5 323 aa12.77□□□□□ -0.36
PCDHA11-202ENST00000616325 CKAP5Q14008 2032 aa12.77□□□□□ -0.36
PCDHA11-202ENST00000616325 A0A0A6YYJ9 748 aa12.77□□□□□ -0.37
PCDHA11-202ENST00000616325 SYNDIG1LA6NDD5 238 aa12.77□□□□□ -0.37
PCDHA11-202ENST00000616325 LGALS8O00214 317 aa12.77□□□□□ -0.37
PCDHA11-202ENST00000616325 SSNA1O43805 119 aa12.77□□□□□ -0.37
PCDHA11-202ENST00000616325 IGLV3-27P01718 113 aa12.77□□□□□ -0.37
PCDHA11-202ENST00000616325 PROS1P07225 676 aa12.77□□□□□ -0.37
PCDHA11-202ENST00000616325 BDKRB1P46663 353 aa12.77□□□□□ -0.37
PCDHA11-202ENST00000616325 SYTL3Q4VX76 610 aa12.77□□□□□ -0.37
PCDHA11-202ENST00000616325 GPRC6AQ5T6X5 926 aa12.77□□□□□ -0.37
PCDHA11-202ENST00000616325 UBE2Q1Q7Z7E8 422 aa12.77□□□□□ -0.37
PCDHA11-202ENST00000616325 C11orf96Q7Z7L8 435 aa12.77□□□□□ -0.37
PCDHA11-202ENST00000616325 LHFPL3Q86UP9 236 aa12.77□□□□□ -0.37
PCDHA11-202ENST00000616325 SDR16C5Q8N3Y7 309 aa12.77□□□□□ -0.37
PCDHA11-202ENST00000616325 UPF1Q92900 1129 aaKnown RBP eCLIP12.77□□□□□ -0.37
PCDHA11-202ENST00000616325 CIDECQ96AQ7 238 aaPredicted RBP12.77□□□□□ -0.37
PCDHA11-202ENST00000616325 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.77□□□□□ -0.37
PCDHA11-202ENST00000616325 ABCG5Q9H222 651 aa12.77□□□□□ -0.37
PCDHA11-202ENST00000616325 PLEKHB1Q9UF11 243 aaPredicted RBP12.77□□□□□ -0.37
PCDHA11-202ENST00000616325 TRIM77I1YAP6 450 aa12.76□□□□□ -0.37
PCDHA11-202ENST00000616325 GAPDHSO14556 408 aaPredicted RBP12.76□□□□□ -0.37
PCDHA11-202ENST00000616325 ETHE1O95571 254 aa12.76□□□□□ -0.37
PCDHA11-202ENST00000616325 ZNF655Q8N720 491 aaPredicted RBP12.76□□□□□ -0.37
PCDHA11-202ENST00000616325 OR11H4Q8NGC9 324 aa12.76□□□□□ -0.37
PCDHA11-202ENST00000616325 PIGKQ92643 395 aa12.76□□□□□ -0.37
PCDHA11-202ENST00000616325 CDCA4Q9BXL8 241 aa12.76□□□□□ -0.37
PCDHA11-202ENST00000616325 MTG2Q9H4K7 406 aa12.76□□□□□ -0.37
PCDHA11-202ENST00000616325 DNAJC11Q9NVH1 559 aa12.76□□□□□ -0.37
PCDHA11-202ENST00000616325 VPS29Q9UBQ0 182 aa12.76□□□□□ -0.37
PCDHA11-202ENST00000616325 PAHP00439 452 aa12.76□□□□□ -0.37
PCDHA11-202ENST00000616325 PRPS2P11908 318 aa12.76□□□□□ -0.37
PCDHA11-202ENST00000616325 MAPK1P28482 360 aa12.76□□□□□ -0.37
PCDHA11-202ENST00000616325 ATP6V1E1P36543 226 aa12.76□□□□□ -0.37
PCDHA11-202ENST00000616325 CRYZQ08257 329 aaKnown RBP12.76□□□□□ -0.37
PCDHA11-202ENST00000616325 DSC1Q08554 894 aa12.76□□□□□ -0.37
PCDHA11-202ENST00000616325 MFSD13AQ14CX5 517 aa12.76□□□□□ -0.37
PCDHA11-202ENST00000616325 TRIM71Q2Q1W2 868 aaKnown RBP12.76□□□□□ -0.37
PCDHA11-202ENST00000616325 KLHL22Q53GT1 634 aa12.76□□□□□ -0.37
PCDHA11-202ENST00000616325 TRIM46Q7Z4K8 759 aa12.76□□□□□ -0.37
PCDHA11-202ENST00000616325 PIAS4Q8N2W9 510 aaPredicted RBP12.76□□□□□ -0.37
PCDHA11-202ENST00000616325 FAM46DQ8NEK8 389 aa12.76□□□□□ -0.37
PCDHA11-202ENST00000616325 SMG7Q92540 1137 aaKnown RBP12.76□□□□□ -0.37
PCDHA11-202ENST00000616325 SCLYQ96I15 445 aa12.76□□□□□ -0.37
PCDHA11-202ENST00000616325 KCTD5Q9NXV2 234 aa12.76□□□□□ -0.37
PCDHA11-202ENST00000616325 C5AR2Q9P296 337 aa12.76□□□□□ -0.37
PCDHA11-202ENST00000616325 TRPS1Q9UHF7 1281 aa12.76□□□□□ -0.37
PCDHA11-202ENST00000616325 GSTK1Q9Y2Q3 226 aa12.76□□□□□ -0.37
PCDHA11-202ENST00000616325 ANKRD36A6QL64 1941 aa12.76□□□□□ -0.37
PCDHA11-202ENST00000616325 MSL3P1P0C860 447 aa12.76□□□□□ -0.37
PCDHA11-202ENST00000616325 AMD1P17707 334 aa12.76□□□□□ -0.37
PCDHA11-202ENST00000616325 IL1RNP18510 177 aa12.76□□□□□ -0.37
PCDHA11-202ENST00000616325 KELP23276 732 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms