RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 PEPDP12955 493 aa12.54□□□□□ -0.4
MSH6-214ENST00000616033 IL1RNP18510 177 aa12.54□□□□□ -0.4
MSH6-214ENST00000616033 HOXD10P28358 340 aa12.54□□□□□ -0.4
MSH6-214ENST00000616033 RPS5P46782 204 aaKnown RBP12.54□□□□□ -0.4
MSH6-214ENST00000616033 ZNF81P51508 661 aa12.54□□□□□ -0.4
MSH6-214ENST00000616033 ARHGDIBP52566 201 aa12.54□□□□□ -0.4
MSH6-214ENST00000616033 CDH4P55283 916 aa12.54□□□□□ -0.4
MSH6-214ENST00000616033 HEPACAMQ14CZ8 416 aa12.54□□□□□ -0.4
MSH6-214ENST00000616033 SEC23BQ15437 767 aa12.54□□□□□ -0.4
MSH6-214ENST00000616033 ESCO2Q56NI9 601 aa12.54□□□□□ -0.4
MSH6-214ENST00000616033 UNC5DQ6UXZ4 953 aa12.54□□□□□ -0.4
MSH6-214ENST00000616033 SLC5A11Q8WWX8 675 aa12.54□□□□□ -0.4
MSH6-214ENST00000616033 MND1Q9BWT6 205 aa12.54□□□□□ -0.4
MSH6-214ENST00000616033 SPATA9Q9BWV2 254 aa12.54□□□□□ -0.4
MSH6-214ENST00000616033 CHIAQ9BZP6 476 aa12.54□□□□□ -0.4
MSH6-214ENST00000616033 MED28Q9H204 178 aa12.54□□□□□ -0.4
MSH6-214ENST00000616033 FANCFQ9NPI8 374 aa12.54□□□□□ -0.4
MSH6-214ENST00000616033 GPATCH2Q9NW75 528 aa12.54□□□□□ -0.4
MSH6-214ENST00000616033 FNIP2Q9P278 1114 aa12.54□□□□□ -0.4
MSH6-214ENST00000616033 CSKP41240 450 aa12.54□□□□□ -0.4
MSH6-214ENST00000616033 BDKRB1P46663 353 aa12.54□□□□□ -0.4
MSH6-214ENST00000616033 SRP9P49458 86 aaKnown RBP12.54□□□□□ -0.4
MSH6-214ENST00000616033 MBTPS1Q14703 1052 aa12.54□□□□□ -0.4
MSH6-214ENST00000616033 RSPO2Q6UXX9 243 aaPredicted RBP12.54□□□□□ -0.4
MSH6-214ENST00000616033 FAM120CQ9NX05 1096 aaKnown RBP12.54□□□□□ -0.4
MSH6-214ENST00000616033 KCTD5Q9NXV2 234 aa12.54□□□□□ -0.4
MSH6-214ENST00000616033 PLEKHB1Q9UF11 243 aaPredicted RBP12.54□□□□□ -0.4
MSH6-214ENST00000616033 SPTBP11277 2137 aa12.54□□□□□ -0.4
MSH6-214ENST00000616033 A0A0G2JN53 185 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 TMEM229AB2RXF0 380 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 SCAMP2O15127 329 aaKnown RBP12.53□□□□□ -0.4
MSH6-214ENST00000616033 NTN1O95631 604 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 PAHP00439 452 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 SEMG1P04279 462 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 NAGAP17050 411 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 CFL1P23528 166 aaKnown RBP12.53□□□□□ -0.4
MSH6-214ENST00000616033 PRKAG1P54619 331 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 ASAH1Q13510 395 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 VEZF1Q14119 521 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 DCST1Q5T197 706 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 GARNL3Q5VVW2 1013 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 KIAA1161Q6NSJ0 714 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 NCEH1Q6PIU2 408 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 MARCH9Q86YJ5 346 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 RDH10Q8IZV5 341 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 APCDD1Q8J025 514 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 NXPE1Q8N323 547 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 DNAJB8Q8NHS0 232 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 CEP76Q8TAP6 659 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 TM9SF4Q92544 642 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 DCLRE1CQ96SD1 692 aaKnown RBP12.53□□□□□ -0.4
MSH6-214ENST00000616033 RAD9AQ99638 391 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 KATNB1Q9BVA0 655 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 BRD9Q9H8M2 597 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 STARD7Q9NQZ5 370 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 PADI2Q9Y2J8 665 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 KNL1Q8NG31 2342 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 GAPDHSO14556 408 aaPredicted RBP12.53□□□□□ -0.4
MSH6-214ENST00000616033 PRKYO43930 277 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 CLDN11O75508 207 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 CTGFP29279 349 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 PURAQ00577 322 aaKnown RBP12.53□□□□□ -0.4
MSH6-214ENST00000616033 RALGAPA2Q2PPJ7 1873 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 FNDC1Q4ZHG4 1894 aaPredicted RBP12.53□□□□□ -0.4
MSH6-214ENST00000616033 LAMTOR1Q6IAA8 161 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 METTL2BQ6P1Q9 378 aaKnown RBP12.53□□□□□ -0.4
MSH6-214ENST00000616033 CCDC149Q6ZUS6 474 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 SLC25A46Q96AG3 418 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 WFDC6Q9BQY6 131 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 SEC22CQ9BRL7 303 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 YIPF4Q9BSR8 244 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 TRAF4Q9BUZ4 470 aaPredicted RBP12.53□□□□□ -0.4
MSH6-214ENST00000616033 CDCA4Q9BXL8 241 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 SAP130Q9H0E3 1048 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 SCPEP1Q9HB40 452 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 KLHL1Q9NR64 748 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 SEMA3GQ9NS98 782 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 CLCA2Q9UQC9 943 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 OTOFQ9HC10 1997 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 PTPRDP23468 1912 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 TMEM202A6NGA9 273 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 NPIPB15A6NHN6 443 aaPredicted RBP12.53□□□□□ -0.4
MSH6-214ENST00000616033 PDPK1O15530 556 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 ORC5O43913 435 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 F11P03951 625 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 NR2F6P10588 404 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 STK19P49842 368 aaPredicted RBP12.53□□□□□ -0.4
MSH6-214ENST00000616033 LIM2P55344 173 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 TAS2R50P59544 299 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 HSPB3Q12988 150 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 ZNF791Q3KP31 576 aaPredicted RBP12.53□□□□□ -0.4
MSH6-214ENST00000616033 HUS1BQ8NHY5 278 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 ARMC5Q96C12 935 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 EIF3KQ9UBQ5 218 aaKnown RBP12.53□□□□□ -0.4
MSH6-214ENST00000616033 PPIEQ9UNP9 301 aaKnown RBP12.53□□□□□ -0.4
MSH6-214ENST00000616033 RUVBL1Q9Y265 456 aaKnown RBP12.53□□□□□ -0.4
MSH6-214ENST00000616033 TRAPPC4Q9Y296 219 aa12.53□□□□□ -0.4
MSH6-214ENST00000616033 HYKKA2RU49 373 aa12.52□□□□□ -0.4
MSH6-214ENST00000616033 NME6O75414 186 aaPredicted RBP12.52□□□□□ -0.4
MSH6-214ENST00000616033 STATHP02808 62 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms