RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 TSPAN33Q86UF1 283 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 OR10H4Q8NGA5 316 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 PMM1Q92871 262 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 SHISA4Q96DD7 197 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 SFXN2Q96NB2 322 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 TBC1D10AQ9BXI6 508 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 ALOXE3Q9BYJ1 711 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 TM9SF3Q9HD45 589 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 XIRP1Q702N8 1843 aaKnown RBP9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 LOC285095A0A1B0GVY8 99 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 C17orf105B2RV13 164 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 SOX1O00570 391 aaPredicted RBP9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 LSM1O15116 133 aaKnown RBP9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 HEXAP06865 529 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 POU3F2P20265 443 aaPredicted RBP9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 TSFMP43897 325 aaKnown RBP9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 CROCCP3Q8IVE0 287 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 SETD6Q8TBK2 473 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 NINJ1Q92982 152 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 OR51I1Q9H343 314 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 MEAF6Q9HAF1 191 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 SLC35C2Q9NQQ7 365 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 ING3Q9NXR8 418 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 WDPCPO95876 746 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 SSR4P51571 173 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 LEXMQ3ZCV2 418 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 COQ5Q5HYK3 327 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 RNF130Q86XS8 419 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 OR7G1Q8NGA0 311 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 ARRDC3Q96B67 414 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 COQ8BQ96D53 544 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 EHD3Q9NZN3 535 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 C1SP09871 688 aa9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 GRIA1P42261 906 aa9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 CACNA2D1P54289 1103 aa9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 CLPPQ16740 277 aaPredicted RBP9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 RANBP10Q6VN20 620 aa9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 GATAD2BQ8WXI9 593 aa9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 ASB12Q8WXK4 309 aa9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 SGTBQ96EQ0 304 aa9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 MCHR1Q99705 422 aa9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 MEMO1Q9Y316 297 aa9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 EXOSC1Q9Y3B2 195 aaKnown RBP9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 KIF1CO43896 1103 aaKnown RBP9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 TPMTP51580 245 aa9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 CLDN2P57739 230 aa9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 PAQR7Q86WK9 346 aa9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 YIPF7Q8N8F6 280 aa9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 ESAMQ96AP7 390 aa9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 PDLIM5Q96HC4 596 aaKnown RBP9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 GINS4Q9BRT9 223 aa9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 FBXO9Q9UK97 447 aaPredicted RBP9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 MBTPS2O43462 519 aa9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 ZNF888P0CJ79 500 aaPredicted RBP9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 ARPC4P59998 168 aa9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 LASP1Q14847 261 aaKnown RBP9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 TRAF7Q6Q0C0 670 aa9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 RTN4RL1Q86UN2 441 aaPredicted RBP9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 ZNF619Q8N2I2 560 aa9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 OR2A12Q8NGT7 310 aa9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 PROKR1Q8TCW9 393 aa9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 YTHDF1Q9BYJ9 559 aaKnown RBP9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 C11orf16Q9NQ32 467 aa9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 TRIM36Q9NQ86 728 aa9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 ISPDA4D126 451 aa9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 IL12AP29459 219 aa9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 GRK5P34947 590 aa9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 APLNRP35414 380 aa9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 HK3P52790 923 aa9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 HYAL1Q12794 435 aa9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 MERTKQ12866 999 aa9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 NRF1Q16656 503 aa9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 ZIK1Q3SY52 487 aaPredicted RBP9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 PYDC2Q56P42 97 aa9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 ARHGAP11AQ6P4F7 1023 aa9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 CLVS1Q8IUQ0 354 aaPredicted RBP9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 DCBLD1Q8N8Z6 715 aa9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 OR1J2Q8NGS2 313 aa9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 OR6K6Q8NGW6 343 aa9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 OR5AK3PQ8NH89 298 aa9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 C16orf78Q8WTQ4 265 aa9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 DNAJA4Q8WW22 397 aaPredicted RBP9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 MYADMQ96S97 322 aa9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 C19orf43Q9BQ61 176 aa9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 TMEM121BQ9BXQ6 578 aaPredicted RBP9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 ARNT2Q9HBZ2 717 aa9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 PDE10AQ9Y233 779 aa9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 PCDHB14Q9Y5E9 798 aa9.29□□□□□ -0.92
TNFRSF9-204ENST00000615230 TMEM221A6NGB7 291 aa9.28□□□□□ -0.92
TNFRSF9-204ENST00000615230 ANKRD65E5RJM6 399 aa9.28□□□□□ -0.92
TNFRSF9-204ENST00000615230 M0R296 226 aa9.28□□□□□ -0.92
TNFRSF9-204ENST00000615230 ADAM12O43184 909 aa9.28□□□□□ -0.92
TNFRSF9-204ENST00000615230 HTRA2O43464 458 aaPredicted RBP9.28□□□□□ -0.92
TNFRSF9-204ENST00000615230 PLEKHG7Q6ZR37 379 aa9.28□□□□□ -0.92
TNFRSF9-204ENST00000615230 CCDC116Q8IYX3 515 aa9.28□□□□□ -0.92
TNFRSF9-204ENST00000615230 ZNF676Q8N7Q3 588 aa9.28□□□□□ -0.92
TNFRSF9-204ENST00000615230 ASB9Q96DX5 294 aa9.28□□□□□ -0.92
TNFRSF9-204ENST00000615230 CCNL2Q96S94 520 aaPredicted RBP9.28□□□□□ -0.92
TNFRSF9-204ENST00000615230 CDX2Q99626 313 aaPredicted RBP9.28□□□□□ -0.92
TNFRSF9-204ENST00000615230 MND1Q9BWT6 205 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms