RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 ZBED6CLQ96FA7 236 aaPredicted RBP13.8□□□□□ -0.2
CD48-203ENST00000613788 SLC45A3Q96JT2 553 aa13.8□□□□□ -0.2
CD48-203ENST00000613788 ZNF681Q96N22 645 aa13.8□□□□□ -0.2
CD48-203ENST00000613788 PELOQ9BRX2 385 aaKnown RBP13.8□□□□□ -0.2
CD48-203ENST00000613788 WDR70Q9NW82 654 aa13.8□□□□□ -0.2
CD48-203ENST00000613788 ARMCX1Q9P291 453 aa13.8□□□□□ -0.2
CD48-203ENST00000613788 C19orf25Q9UFG5 118 aaPredicted RBP13.8□□□□□ -0.2
CD48-203ENST00000613788 IGKV3D-11A0A0A0MRZ8 115 aa13.79□□□□□ -0.2
CD48-203ENST00000613788 TCRBV16S1A1N1A0A5B0 115 aa13.79□□□□□ -0.2
CD48-203ENST00000613788 CCDC154A6NI56 674 aa13.79□□□□□ -0.2
CD48-203ENST00000613788 MYO1GB0I1T2 1018 aa13.79□□□□□ -0.2
CD48-203ENST00000613788 CFLARO15519 480 aa13.79□□□□□ -0.2
CD48-203ENST00000613788 SNRPB2P08579 225 aaKnown RBP13.79□□□□□ -0.2
CD48-203ENST00000613788 SLC35E2P0CK97 266 aa13.79□□□□□ -0.2
CD48-203ENST00000613788 C8orf89P0DMQ9 161 aa13.79□□□□□ -0.2
CD48-203ENST00000613788 CPMP14384 443 aa13.79□□□□□ -0.2
CD48-203ENST00000613788 F8A1P23610 371 aa13.79□□□□□ -0.2
CD48-203ENST00000613788 FEN1P39748 380 aaKnown RBP13.79□□□□□ -0.2
CD48-203ENST00000613788 LRRC74AQ0VAA2 488 aa13.79□□□□□ -0.2
CD48-203ENST00000613788 RCAN2Q14206 197 aa13.79□□□□□ -0.2
CD48-203ENST00000613788 CEBPEQ15744 281 aa13.79□□□□□ -0.2
CD48-203ENST00000613788 ZNF385BQ569K4 471 aa13.79□□□□□ -0.2
CD48-203ENST00000613788 OR4F3Q6IEY1 312 aa13.79□□□□□ -0.2
CD48-203ENST00000613788 ST13P4Q8IZP2 240 aaPredicted RBP13.79□□□□□ -0.2
CD48-203ENST00000613788 LRRC25Q8N386 305 aaPredicted RBP13.79□□□□□ -0.2
CD48-203ENST00000613788 ZFP28Q8NHY6 868 aa13.79□□□□□ -0.2
CD48-203ENST00000613788 SNIP1Q8TAD8 396 aaKnown RBP13.79□□□□□ -0.2
CD48-203ENST00000613788 NUDT8Q8WV74 236 aa13.79□□□□□ -0.2
CD48-203ENST00000613788 CNRIP1Q96F85 164 aaPredicted RBP13.79□□□□□ -0.2
CD48-203ENST00000613788 DGAT2Q96PD7 388 aa13.79□□□□□ -0.2
CD48-203ENST00000613788 OR52E6Q96RD3 313 aa13.79□□□□□ -0.2
CD48-203ENST00000613788 CCDC106Q9BWC9 280 aa13.79□□□□□ -0.2
CD48-203ENST00000613788 DPH1Q9BZG8 443 aa13.79□□□□□ -0.2
CD48-203ENST00000613788 ACSS1Q9NUB1 689 aaPredicted RBP13.79□□□□□ -0.2
CD48-203ENST00000613788 FAM120CQ9NX05 1096 aaKnown RBP13.79□□□□□ -0.2
CD48-203ENST00000613788 FER1L5A0AVI2 2057 aa13.78□□□□□ -0.2
CD48-203ENST00000613788 PRSS51A0A1B0GVH4 220 aa13.78□□□□□ -0.2
CD48-203ENST00000613788 A0A1W2PRB8 838 aa13.78□□□□□ -0.2
CD48-203ENST00000613788 C9JVG2 144 aa13.78□□□□□ -0.2
CD48-203ENST00000613788 OR10H2O60403 315 aa13.78□□□□□ -0.2
CD48-203ENST00000613788 IFNA16P05015 189 aa13.78□□□□□ -0.2
CD48-203ENST00000613788 UMODP07911 640 aa13.78□□□□□ -0.2
CD48-203ENST00000613788 MMP11P24347 488 aa13.78□□□□□ -0.2
CD48-203ENST00000613788 ZFP36L2P47974 494 aaKnown RBP13.78□□□□□ -0.2
CD48-203ENST00000613788 DGKQP52824 942 aa13.78□□□□□ -0.2
CD48-203ENST00000613788 MANFP55145 182 aaKnown RBP13.78□□□□□ -0.2
CD48-203ENST00000613788 FOXL2P58012 376 aa13.78□□□□□ -0.2
CD48-203ENST00000613788 RPS18P62269 152 aaKnown RBP13.78□□□□□ -0.2
CD48-203ENST00000613788 PLIN5Q00G26 463 aa13.78□□□□□ -0.2
CD48-203ENST00000613788 CLN3Q13286 438 aa13.78□□□□□ -0.2
CD48-203ENST00000613788 PRSS53Q2L4Q9 553 aa13.78□□□□□ -0.2
CD48-203ENST00000613788 FAAH2Q6GMR7 532 aa13.78□□□□□ -0.2
CD48-203ENST00000613788 FAM180BQ6P0A1 224 aa13.78□□□□□ -0.2
CD48-203ENST00000613788 TMEM205Q6UW68 189 aa13.78□□□□□ -0.2
CD48-203ENST00000613788 MSANTD1Q6ZTZ1 278 aa13.78□□□□□ -0.2
CD48-203ENST00000613788 CCDC116Q8IYX3 515 aa13.78□□□□□ -0.2
CD48-203ENST00000613788 KCNE4Q8WWG9 221 aa13.78□□□□□ -0.2
CD48-203ENST00000613788 TSLPQ969D9 159 aa13.78□□□□□ -0.2
CD48-203ENST00000613788 SPDL1Q96EA4 605 aa13.78□□□□□ -0.2
CD48-203ENST00000613788 VPS50Q96JG6 964 aa13.78□□□□□ -0.2
CD48-203ENST00000613788 RMND5AQ9H871 391 aa13.78□□□□□ -0.2
CD48-203ENST00000613788 PCDHGB4Q9UN71 923 aa13.78□□□□□ -0.2
CD48-203ENST00000613788 CLDN16Q9Y5I7 305 aa13.78□□□□□ -0.2
CD48-203ENST00000613788 TGFBR3LH3BV60 316 aa13.77□□□□□ -0.21
CD48-203ENST00000613788 NR5A2O00482 541 aa13.77□□□□□ -0.21
CD48-203ENST00000613788 RNASET2O00584 256 aaKnown RBP13.77□□□□□ -0.21
CD48-203ENST00000613788 DYRK3O43781 588 aa13.77□□□□□ -0.21
CD48-203ENST00000613788 CREG1O75629 220 aa13.77□□□□□ -0.21
CD48-203ENST00000613788 ATP1B1P05026 303 aa13.77□□□□□ -0.21
CD48-203ENST00000613788 LIFP15018 202 aa13.77□□□□□ -0.21
CD48-203ENST00000613788 TNNI3P19429 210 aa13.77□□□□□ -0.21
CD48-203ENST00000613788 GALNSP34059 522 aa13.77□□□□□ -0.21
CD48-203ENST00000613788 FRKP42685 505 aaPredicted RBP13.77□□□□□ -0.21
CD48-203ENST00000613788 STT3AP46977 705 aa13.77□□□□□ -0.21
CD48-203ENST00000613788 NCBP2P52298 156 aaKnown RBP eCLIP13.77□□□□□ -0.21
CD48-203ENST00000613788 OR4D2P58180 307 aa13.77□□□□□ -0.21
CD48-203ENST00000613788 MLC1Q15049 377 aa13.77□□□□□ -0.21
CD48-203ENST00000613788 MAPKAPK3Q16644 382 aa13.77□□□□□ -0.21
CD48-203ENST00000613788 MPEG1Q2M385 716 aa13.77□□□□□ -0.21
CD48-203ENST00000613788 ZNF750Q32MQ0 723 aa13.77□□□□□ -0.21
CD48-203ENST00000613788 GK5Q6ZS86 529 aa13.77□□□□□ -0.21
CD48-203ENST00000613788 ANKRD37Q7Z713 158 aa13.77□□□□□ -0.21
CD48-203ENST00000613788 RP9Q8TA86 221 aaKnown RBP13.77□□□□□ -0.21
CD48-203ENST00000613788 OR5P2Q8WZ92 322 aa13.77□□□□□ -0.21
CD48-203ENST00000613788 GATA6Q92908 595 aa13.77□□□□□ -0.21
CD48-203ENST00000613788 CIDECQ96AQ7 238 aaPredicted RBP13.77□□□□□ -0.21
CD48-203ENST00000613788 ERP27Q96DN0 273 aa13.77□□□□□ -0.21
CD48-203ENST00000613788 CMTM5Q96DZ9 223 aa13.77□□□□□ -0.21
CD48-203ENST00000613788 SLC25A23Q9BV35 468 aa13.77□□□□□ -0.21
CD48-203ENST00000613788 ADAP2Q9NPF8 381 aa13.77□□□□□ -0.21
CD48-203ENST00000613788 PNO1Q9NRX1 252 aaKnown RBP13.77□□□□□ -0.21
CD48-203ENST00000613788 IL17BQ9UHF5 180 aa13.77□□□□□ -0.21
CD48-203ENST00000613788 SPTBN2O15020 2390 aa13.77□□□□□ -0.21
CD48-203ENST00000613788 LOC100653049A0A140TA62 436 aa13.76□□□□□ -0.21
CD48-203ENST00000613788 MYOCOSA0A1B0GUC4 107 aa13.76□□□□□ -0.21
CD48-203ENST00000613788 A0A1W2PP18 115 aa13.76□□□□□ -0.21
CD48-203ENST00000613788 TLX3O43711 291 aaPredicted RBP13.76□□□□□ -0.21
CD48-203ENST00000613788 KRT34O76011 436 aa13.76□□□□□ -0.21
CD48-203ENST00000613788 NT5EP21589 574 aa13.76□□□□□ -0.21
CD48-203ENST00000613788 EFNA3P52797 238 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms