RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 C17orf105B2RV13 164 aa12.4□□□□□ -0.42
MDC1-209ENST00000613547 TGFBR3LH3BV60 316 aa12.4□□□□□ -0.42
MDC1-209ENST00000613547 FAM87AP0C7U9 286 aa12.4□□□□□ -0.42
MDC1-209ENST00000613547 PRR35P0CG20 571 aa12.4□□□□□ -0.42
MDC1-209ENST00000613547 BCKDHAP12694 445 aa12.4□□□□□ -0.42
MDC1-209ENST00000613547 CPMP14384 443 aa12.4□□□□□ -0.42
MDC1-209ENST00000613547 PORP16435 677 aaPredicted RBP12.4□□□□□ -0.42
MDC1-209ENST00000613547 LBPP18428 481 aa12.4□□□□□ -0.42
MDC1-209ENST00000613547 SDC1P18827 310 aa12.4□□□□□ -0.42
MDC1-209ENST00000613547 CSNK2A2P19784 350 aaPredicted RBP12.4□□□□□ -0.42
MDC1-209ENST00000613547 GALNSP34059 522 aa12.4□□□□□ -0.42
MDC1-209ENST00000613547 HPCAL1P37235 193 aa12.4□□□□□ -0.42
MDC1-209ENST00000613547 XKP51811 444 aa12.4□□□□□ -0.42
MDC1-209ENST00000613547 SLC26A5P58743 744 aa12.4□□□□□ -0.42
MDC1-209ENST00000613547 ERVK-8P63133 956 aa12.4□□□□□ -0.42
MDC1-209ENST00000613547 EMX2Q04743 252 aa12.4□□□□□ -0.42
MDC1-209ENST00000613547 LINC00303Q3SY05 128 aa12.4□□□□□ -0.42
MDC1-209ENST00000613547 IL23RQ5VWK5 629 aa12.4□□□□□ -0.42
MDC1-209ENST00000613547 MORN4Q8NDC4 146 aa12.4□□□□□ -0.42
MDC1-209ENST00000613547 B3GNT7Q8NFL0 401 aa12.4□□□□□ -0.42
MDC1-209ENST00000613547 C9orf43Q8TAL5 461 aaPredicted RBP12.4□□□□□ -0.42
MDC1-209ENST00000613547 C1orf50Q9BV19 199 aa12.4□□□□□ -0.42
MDC1-209ENST00000613547 SLCO1B3Q9NPD5 702 aa12.4□□□□□ -0.42
MDC1-209ENST00000613547 GIMAP2Q9UG22 337 aa12.4□□□□□ -0.42
MDC1-209ENST00000613547 ENTPD4Q9Y227 616 aa12.4□□□□□ -0.42
MDC1-209ENST00000613547 KMT2BQ9UMN6 2715 aaPredicted RBP12.4□□□□□ -0.42
MDC1-209ENST00000613547 MYOCOSA0A1B0GUC4 107 aa12.39□□□□□ -0.43
MDC1-209ENST00000613547 MASP2O00187 686 aa12.39□□□□□ -0.43
MDC1-209ENST00000613547 CEACAM4O75871 244 aa12.39□□□□□ -0.43
MDC1-209ENST00000613547 PCSK2P16519 638 aa12.39□□□□□ -0.43
MDC1-209ENST00000613547 TACR1P25103 407 aa12.39□□□□□ -0.43
MDC1-209ENST00000613547 PGDP52209 483 aa12.39□□□□□ -0.43
MDC1-209ENST00000613547 Q0VFX4 171 aa12.39□□□□□ -0.43
MDC1-209ENST00000613547 CRB2Q5IJ48 1285 aa12.39□□□□□ -0.43
MDC1-209ENST00000613547 AGAP7PQ5VUJ5 663 aa12.39□□□□□ -0.43
MDC1-209ENST00000613547 FAM71E1Q6IPT2 247 aa12.39□□□□□ -0.43
MDC1-209ENST00000613547 R3HCC1LQ7Z5L2 792 aaKnown RBP12.39□□□□□ -0.43
MDC1-209ENST00000613547 TICAM1Q8IUC6 712 aa12.39□□□□□ -0.43
MDC1-209ENST00000613547 GALNT12Q8IXK2 581 aa12.39□□□□□ -0.43
MDC1-209ENST00000613547 MMP21Q8N119 569 aa12.39□□□□□ -0.43
MDC1-209ENST00000613547 LRRC25Q8N386 305 aaPredicted RBP12.39□□□□□ -0.43
MDC1-209ENST00000613547 LIX1Q8N485 282 aa12.39□□□□□ -0.43
MDC1-209ENST00000613547 SLC5A8Q8N695 610 aa12.39□□□□□ -0.43
MDC1-209ENST00000613547 LSM14AQ8ND56 463 aaKnown RBP12.39□□□□□ -0.43
MDC1-209ENST00000613547 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.39□□□□□ -0.43
MDC1-209ENST00000613547 PTPMT1Q8WUK0 201 aaPredicted RBP12.39□□□□□ -0.43
MDC1-209ENST00000613547 TM9SF4Q92544 642 aa12.39□□□□□ -0.43
MDC1-209ENST00000613547 RIT1Q92963 219 aa12.39□□□□□ -0.43
MDC1-209ENST00000613547 EXOSC8Q96B26 276 aaKnown RBP12.39□□□□□ -0.43
MDC1-209ENST00000613547 VMP1Q96GC9 406 aa12.39□□□□□ -0.43
MDC1-209ENST00000613547 ABHD17AQ96GS6 310 aa12.39□□□□□ -0.43
MDC1-209ENST00000613547 AGAP4Q96P64 663 aa12.39□□□□□ -0.43
MDC1-209ENST00000613547 TSSK3Q96PN8 268 aa12.39□□□□□ -0.43
MDC1-209ENST00000613547 BBS4Q96RK4 519 aa12.39□□□□□ -0.43
MDC1-209ENST00000613547 AKTIPQ9H8T0 292 aa12.39□□□□□ -0.43
MDC1-209ENST00000613547 KCNK13Q9HB14 408 aa12.39□□□□□ -0.43
MDC1-209ENST00000613547 MMP25Q9NPA2 562 aa12.39□□□□□ -0.43
MDC1-209ENST00000613547 SLC35C2Q9NQQ7 365 aa12.39□□□□□ -0.43
MDC1-209ENST00000613547 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.39□□□□□ -0.43
MDC1-209ENST00000613547 ASIC5Q9NY37 505 aa12.39□□□□□ -0.43
MDC1-209ENST00000613547 C5AR2Q9P296 337 aa12.39□□□□□ -0.43
MDC1-209ENST00000613547 HEY2Q9UBP5 337 aa12.39□□□□□ -0.43
MDC1-209ENST00000613547 CES1P1Q9UKY3 287 aa12.39□□□□□ -0.43
MDC1-209ENST00000613547 MAPRE3Q9UPY8 281 aa12.39□□□□□ -0.43
MDC1-209ENST00000613547 PCDHGB7Q9Y5F8 929 aa12.39□□□□□ -0.43
MDC1-209ENST00000613547 NUP210LQ5VU65 1888 aa12.38□□□□□ -0.43
MDC1-209ENST00000613547 WASHC1A8K0Z3 465 aa12.38□□□□□ -0.43
MDC1-209ENST00000613547 A8MUI8 341 aa12.38□□□□□ -0.43
MDC1-209ENST00000613547 TCP11X1B4DZS4 312 aa12.38□□□□□ -0.43
MDC1-209ENST00000613547 ATXN7O15265 892 aaPredicted RBP12.38□□□□□ -0.43
MDC1-209ENST00000613547 DIAPH2O60879 1101 aa12.38□□□□□ -0.43
MDC1-209ENST00000613547 TGDSO95455 350 aa12.38□□□□□ -0.43
MDC1-209ENST00000613547 ITGAMP11215 1152 aa12.38□□□□□ -0.43
MDC1-209ENST00000613547 NT5EP21589 574 aa12.38□□□□□ -0.43
MDC1-209ENST00000613547 EPHA3P29320 983 aa12.38□□□□□ -0.43
MDC1-209ENST00000613547 NTSP30990 170 aa12.38□□□□□ -0.43
MDC1-209ENST00000613547 MPIP34949 423 aa12.38□□□□□ -0.43
MDC1-209ENST00000613547 FEN1P39748 380 aaKnown RBP12.38□□□□□ -0.43
MDC1-209ENST00000613547 CLCN2P51788 898 aa12.38□□□□□ -0.43
MDC1-209ENST00000613547 RAPSNQ13702 412 aa12.38□□□□□ -0.43
MDC1-209ENST00000613547 VWA5B1Q5TIE3 1220 aa12.38□□□□□ -0.43
MDC1-209ENST00000613547 NXNQ6DKJ4 435 aa12.38□□□□□ -0.43
MDC1-209ENST00000613547 TCTN3Q6NUS6 607 aa12.38□□□□□ -0.43
MDC1-209ENST00000613547 SPATA19Q7Z5L4 167 aa12.38□□□□□ -0.43
MDC1-209ENST00000613547 HPS6Q86YV9 775 aa12.38□□□□□ -0.43
MDC1-209ENST00000613547 NFAM1Q8NET5 270 aaPredicted RBP12.38□□□□□ -0.43
MDC1-209ENST00000613547 FDCSPQ8NFU4 85 aa12.38□□□□□ -0.43
MDC1-209ENST00000613547 CEP70Q8NHQ1 597 aa12.38□□□□□ -0.43
MDC1-209ENST00000613547 CLHC1Q8NHS4 586 aa12.38□□□□□ -0.43
MDC1-209ENST00000613547 SLC2A12Q8TD20 617 aa12.38□□□□□ -0.43
MDC1-209ENST00000613547 UCN3Q969E3 161 aa12.38□□□□□ -0.43
MDC1-209ENST00000613547 GFM2Q969S9 779 aaKnown RBP12.38□□□□□ -0.43
MDC1-209ENST00000613547 PPWD1Q96BP3 646 aaKnown RBP12.38□□□□□ -0.43
MDC1-209ENST00000613547 PPCDCQ96CD2 204 aa12.38□□□□□ -0.43
MDC1-209ENST00000613547 MTERF3Q96E29 417 aa12.38□□□□□ -0.43
MDC1-209ENST00000613547 ZNF764Q96H86 408 aaPredicted RBP12.38□□□□□ -0.43
MDC1-209ENST00000613547 EGLN2Q96KS0 407 aa12.38□□□□□ -0.43
MDC1-209ENST00000613547 PRPF18Q99633 342 aaKnown RBP12.38□□□□□ -0.43
MDC1-209ENST00000613547 DEFB126Q9BYW3 111 aa12.38□□□□□ -0.43
MDC1-209ENST00000613547 OR8D2Q9GZM6 311 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms