RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 DNAJC11Q9NVH1 559 aa21.49■■□□□ 1.03
MMP28-203ENST00000612672 CSPG4Q6UVK1 2322 aa21.49■■□□□ 1.03
MMP28-203ENST00000612672 COL6A5A8TX70 2615 aa21.48■■□□□ 1.03
MMP28-203ENST00000612672 TUBAL3A6NHL2 446 aa21.48■■□□□ 1.03
MMP28-203ENST00000612672 TRIM3O75382 744 aaPredicted RBP21.48■■□□□ 1.03
MMP28-203ENST00000612672 SCELO95171 688 aa21.48■■□□□ 1.03
MMP28-203ENST00000612672 GDF1P27539 372 aa21.48■■□□□ 1.03
MMP28-203ENST00000612672 TIMP3P35625 211 aa21.48■■□□□ 1.03
MMP28-203ENST00000612672 FNTAP49354 379 aa21.48■■□□□ 1.03
MMP28-203ENST00000612672 DCAF7P61962 342 aa21.48■■□□□ 1.03
MMP28-203ENST00000612672 RCN2Q14257 317 aa21.48■■□□□ 1.03
MMP28-203ENST00000612672 FNDC7Q5VTL7 733 aa21.48■■□□□ 1.03
MMP28-203ENST00000612672 TMEM64Q6YI46 380 aa21.48■■□□□ 1.03
MMP28-203ENST00000612672 LACC1Q8IV20 430 aa21.48■■□□□ 1.03
MMP28-203ENST00000612672 VWA5B2Q8N398 1253 aa21.48■■□□□ 1.03
MMP28-203ENST00000612672 LIX1Q8N485 282 aa21.48■■□□□ 1.03
MMP28-203ENST00000612672 ZNF473Q8WTR7 871 aaKnown RBP21.48■■□□□ 1.03
MMP28-203ENST00000612672 MCMBPQ9BTE3 642 aa21.48■■□□□ 1.03
MMP28-203ENST00000612672 PITHD1Q9GZP4 211 aaPredicted RBP21.48■■□□□ 1.03
MMP28-203ENST00000612672 PRDM14Q9GZV8 571 aa21.48■■□□□ 1.03
MMP28-203ENST00000612672 QPCTLQ9NXS2 382 aa21.48■■□□□ 1.03
MMP28-203ENST00000612672 ZNF629Q9UEG4 869 aaPredicted RBP21.48■■□□□ 1.03
MMP28-203ENST00000612672 MTRF1LQ9UGC7 380 aaKnown RBP21.48■■□□□ 1.03
MMP28-203ENST00000612672 SLC6A5Q9Y345 797 aa21.48■■□□□ 1.03
MMP28-203ENST00000612672 TEX264Q9Y6I9 313 aa21.48■■□□□ 1.03
MMP28-203ENST00000612672 ARID1AO14497 2285 aa21.48■■□□□ 1.03
MMP28-203ENST00000612672 WASHC1A8K0Z3 465 aa21.47■■□□□ 1.03
MMP28-203ENST00000612672 CLCA1A8K7I4 914 aa21.47■■□□□ 1.03
MMP28-203ENST00000612672 PGRMC1O00264 195 aaKnown RBP21.47■■□□□ 1.03
MMP28-203ENST00000612672 SAP18O00422 153 aaKnown RBP21.47■■□□□ 1.03
MMP28-203ENST00000612672 PIAS1O75925 651 aa21.47■■□□□ 1.03
MMP28-203ENST00000612672 HRGP04196 525 aa21.47■■□□□ 1.03
MMP28-203ENST00000612672 HIST1H1TP22492 207 aaPredicted RBP21.47■■□□□ 1.03
MMP28-203ENST00000612672 ADSLP30566 484 aaPredicted RBP21.47■■□□□ 1.03
MMP28-203ENST00000612672 SOX18P35713 384 aa21.47■■□□□ 1.03
MMP28-203ENST00000612672 GGT5P36269 586 aa21.47■■□□□ 1.03
MMP28-203ENST00000612672 PPP1R7Q15435 360 aa21.47■■□□□ 1.03
MMP28-203ENST00000612672 MAATS1Q7Z4T9 603 aa21.47■■□□□ 1.03
MMP28-203ENST00000612672 CXorf67Q86X51 503 aaPredicted RBP21.47■■□□□ 1.03
MMP28-203ENST00000612672 PTCD3Q96EY7 689 aaKnown RBP21.47■■□□□ 1.03
MMP28-203ENST00000612672 FBXL20Q96IG2 436 aa21.47■■□□□ 1.03
MMP28-203ENST00000612672 DGAT2Q96PD7 388 aa21.47■■□□□ 1.03
MMP28-203ENST00000612672 GAL3ST4Q96RP7 486 aa21.47■■□□□ 1.03
MMP28-203ENST00000612672 WWOXQ9NZC7 414 aa21.47■■□□□ 1.03
MMP28-203ENST00000612672 JKAMPQ9P055 326 aa21.47■■□□□ 1.03
MMP28-203ENST00000612672 ASIC3Q9UHC3 531 aa21.47■■□□□ 1.03
MMP28-203ENST00000612672 EDARQ9UNE0 448 aa21.47■■□□□ 1.03
MMP28-203ENST00000612672 MED12LQ86YW9 2145 aa21.46■■□□□ 1.03
MMP28-203ENST00000612672 AHRRA9YTQ3 701 aa21.46■■□□□ 1.03
MMP28-203ENST00000612672 C1QAP02745 245 aa21.46■■□□□ 1.03
MMP28-203ENST00000612672 HEXAP06865 529 aa21.46■■□□□ 1.03
MMP28-203ENST00000612672 CPN2P22792 545 aa21.46■■□□□ 1.03
MMP28-203ENST00000612672 GMPRP36959 345 aa21.46■■□□□ 1.03
MMP28-203ENST00000612672 MSH2P43246 934 aa21.46■■□□□ 1.03
MMP28-203ENST00000612672 HERVK_113P63132 956 aa21.46■■□□□ 1.03
MMP28-203ENST00000612672 ERVK-8P63133 956 aa21.46■■□□□ 1.03
MMP28-203ENST00000612672 EBPQ15125 230 aaKnown RBP21.46■■□□□ 1.03
MMP28-203ENST00000612672 OR4D1Q15615 310 aa21.46■■□□□ 1.03
MMP28-203ENST00000612672 NTRK2Q16620 822 aa21.46■■□□□ 1.03
MMP28-203ENST00000612672 FBXW10Q5XX13 1052 aa21.46■■□□□ 1.03
MMP28-203ENST00000612672 C18orf63Q68DL7 685 aa21.46■■□□□ 1.03
MMP28-203ENST00000612672 CIARTQ8N365 385 aaPredicted RBP21.46■■□□□ 1.03
MMP28-203ENST00000612672 SNX31Q8N9S9 440 aa21.46■■□□□ 1.03
MMP28-203ENST00000612672 BBOF1Q8ND07 529 aa21.46■■□□□ 1.03
MMP28-203ENST00000612672 PBKQ96KB5 322 aa21.46■■□□□ 1.03
MMP28-203ENST00000612672 TBCDQ9BTW9 1192 aa21.46■■□□□ 1.03
MMP28-203ENST00000612672 DOHHQ9BU89 302 aa21.46■■□□□ 1.03
MMP28-203ENST00000612672 ERVK-6Q9BXR3 956 aa21.46■■□□□ 1.03
MMP28-203ENST00000612672 WWTR1Q9GZV5 400 aa21.46■■□□□ 1.03
MMP28-203ENST00000612672 UBQLN3Q9H347 655 aa21.46■■□□□ 1.03
MMP28-203ENST00000612672 CNIH4Q9P003 139 aa21.46■■□□□ 1.03
MMP28-203ENST00000612672 ERVK-19Q9WJR5 959 aa21.46■■□□□ 1.03
MMP28-203ENST00000612672 CLGNO14967 610 aa21.45■■□□□ 1.02
MMP28-203ENST00000612672 LY6G6DO95868 133 aa21.45■■□□□ 1.02
MMP28-203ENST00000612672 FASTKD3Q14CZ7 662 aaKnown RBP21.45■■□□□ 1.02
MMP28-203ENST00000612672 NSUN5P2Q63ZY6 315 aa21.45■■□□□ 1.02
MMP28-203ENST00000612672 ANKMY2Q8IV38 441 aa21.45■■□□□ 1.02
MMP28-203ENST00000612672 SLC15A4Q8N697 577 aa21.45■■□□□ 1.02
MMP28-203ENST00000612672 GRK7Q8WTQ7 553 aa21.45■■□□□ 1.02
MMP28-203ENST00000612672 DDX47Q9H0S4 455 aaKnown RBP21.45■■□□□ 1.02
MMP28-203ENST00000612672 CAB39LQ9H9S4 337 aa21.45■■□□□ 1.02
MMP28-203ENST00000612672 FOXD3Q9UJU5 478 aaPredicted RBP21.45■■□□□ 1.02
MMP28-203ENST00000612672 CAMK2AQ9UQM7 478 aa21.45■■□□□ 1.02
MMP28-203ENST00000612672 CUBNO60494 3623 aa21.45■■□□□ 1.02
MMP28-203ENST00000612672 EEF1E1-BLOC1S5C9J1V9 151 aa21.44■■□□□ 1.02
MMP28-203ENST00000612672 EEF1E1O43324 174 aaKnown RBP21.44■■□□□ 1.02
MMP28-203ENST00000612672 ACSL3O95573 720 aa21.44■■□□□ 1.02
MMP28-203ENST00000612672 TGFB1P01137 390 aa21.44■■□□□ 1.02
MMP28-203ENST00000612672 IL2RAP01589 272 aa21.44■■□□□ 1.02
MMP28-203ENST00000612672 COX7A2P14406 83 aa21.44■■□□□ 1.02
MMP28-203ENST00000612672 HNRNPH2P55795 449 aaKnown RBP21.44■■□□□ 1.02
MMP28-203ENST00000612672 SLC37A1P57057 533 aa21.44■■□□□ 1.02
MMP28-203ENST00000612672 TGM3Q08188 693 aa21.44■■□□□ 1.02
MMP28-203ENST00000612672 CHIT1Q13231 466 aa21.44■■□□□ 1.02
MMP28-203ENST00000612672 E2F2Q14209 437 aa21.44■■□□□ 1.02
MMP28-203ENST00000612672 PCBP2Q15366 365 aaKnown RBP eCLIP21.44■■□□□ 1.02
MMP28-203ENST00000612672 PDK4Q16654 411 aa21.44■■□□□ 1.02
MMP28-203ENST00000612672 VASNQ6EMK4 673 aa21.44■■□□□ 1.02
MMP28-203ENST00000612672 PLXDC2Q6UX71 529 aa21.44■■□□□ 1.02
MMP28-203ENST00000612672 ZNF441Q8N8Z8 693 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms