RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 MTPNP58546 118 aa16.51■□□□□ 0.23
SREK1-216ENST00000612404 ABHD18Q0P651 414 aa16.51■□□□□ 0.23
SREK1-216ENST00000612404 SLC13A2Q13183 592 aa16.51■□□□□ 0.23
SREK1-216ENST00000612404 SCUBE1Q8IWY4 988 aa16.51■□□□□ 0.23
SREK1-216ENST00000612404 ULK2Q8IYT8 1036 aa16.51■□□□□ 0.23
SREK1-216ENST00000612404 CLEC4FQ8N1N0 589 aa16.51■□□□□ 0.23
SREK1-216ENST00000612404 ZFP28Q8NHY6 868 aa16.51■□□□□ 0.23
SREK1-216ENST00000612404 ANKRD27Q96NW4 1050 aa16.51■□□□□ 0.23
SREK1-216ENST00000612404 THUMPD3Q9BV44 507 aaKnown RBP16.51■□□□□ 0.23
SREK1-216ENST00000612404 MMADHCQ9H3L0 296 aaPredicted RBP16.51■□□□□ 0.23
SREK1-216ENST00000612404 KNTC1P50748 2209 aa16.5■□□□□ 0.23
SREK1-216ENST00000612404 CLDN4O14493 209 aa16.5■□□□□ 0.23
SREK1-216ENST00000612404 JRKO75564 520 aa16.5■□□□□ 0.23
SREK1-216ENST00000612404 PTGER1P34995 402 aa16.5■□□□□ 0.23
SREK1-216ENST00000612404 GPC1P35052 558 aa16.5■□□□□ 0.23
SREK1-216ENST00000612404 DUSP2Q05923 314 aa16.5■□□□□ 0.23
SREK1-216ENST00000612404 MFSD4BQ5TF39 518 aa16.5■□□□□ 0.23
SREK1-216ENST00000612404 SLC15A3Q8IY34 581 aa16.5■□□□□ 0.23
SREK1-216ENST00000612404 ZNF595Q8IYB9 648 aa16.5■□□□□ 0.23
SREK1-216ENST00000612404 SAMD14Q8IZD0 417 aaPredicted RBP16.5■□□□□ 0.23
SREK1-216ENST00000612404 TRIML2Q8N7C3 387 aa16.5■□□□□ 0.23
SREK1-216ENST00000612404 PMEPA1Q969W9 287 aa16.5■□□□□ 0.23
SREK1-216ENST00000612404 LIN37Q96GY3 246 aaPredicted RBP16.5■□□□□ 0.23
SREK1-216ENST00000612404 TMEM181Q9P2C4 612 aa16.5■□□□□ 0.23
SREK1-216ENST00000612404 NEUROG3Q9Y4Z2 214 aa16.5■□□□□ 0.23
SREK1-216ENST00000612404 FER1L5A0AVI2 2057 aa16.5■□□□□ 0.23
SREK1-216ENST00000612404 TRBV5-3A0A0A0MS03 114 aa16.49■□□□□ 0.23
SREK1-216ENST00000612404 C15orf38-AP3S2A0A0A6YYH1 394 aa16.49■□□□□ 0.23
SREK1-216ENST00000612404 CPNE3O75131 537 aaKnown RBP16.49■□□□□ 0.23
SREK1-216ENST00000612404 GPR75O95800 540 aa16.49■□□□□ 0.23
SREK1-216ENST00000612404 JMJD7P0C870 316 aa16.49■□□□□ 0.23
SREK1-216ENST00000612404 CSRP1P21291 193 aaKnown RBP16.49■□□□□ 0.23
SREK1-216ENST00000612404 GAB1Q13480 694 aa16.49■□□□□ 0.23
SREK1-216ENST00000612404 SELPLGQ14242 412 aa16.49■□□□□ 0.23
SREK1-216ENST00000612404 RUNDC3AQ59EK9 446 aa16.49■□□□□ 0.23
SREK1-216ENST00000612404 ARPINQ7Z6K5 226 aa16.49■□□□□ 0.23
SREK1-216ENST00000612404 LRRC25Q8N386 305 aaPredicted RBP16.49■□□□□ 0.23
SREK1-216ENST00000612404 GOT1L1Q8NHS2 421 aaPredicted RBP16.49■□□□□ 0.23
SREK1-216ENST00000612404 TMEM125Q96AQ2 219 aa16.49■□□□□ 0.23
SREK1-216ENST00000612404 ZNF681Q96N22 645 aa16.49■□□□□ 0.23
SREK1-216ENST00000612404 NEUROD4Q9HD90 331 aa16.49■□□□□ 0.23
SREK1-216ENST00000612404 PRTFDC1Q9NRG1 225 aa16.49■□□□□ 0.23
SREK1-216ENST00000612404 CMTM6Q9NX76 183 aa16.49■□□□□ 0.23
SREK1-216ENST00000612404 ZNF282Q9UDV7 671 aaPredicted RBP16.49■□□□□ 0.23
SREK1-216ENST00000612404 PISDQ9UG56 409 aa16.49■□□□□ 0.23
SREK1-216ENST00000612404 RRP15Q9Y3B9 282 aaKnown RBP16.49■□□□□ 0.23
SREK1-216ENST00000612404 BLACEA4D250 179 aa16.49■□□□□ 0.23
SREK1-216ENST00000612404 PMS2P1A4D2B8 440 aa16.49■□□□□ 0.23
SREK1-216ENST00000612404 OR2W5A6NFC9 320 aa16.49■□□□□ 0.23
SREK1-216ENST00000612404 NME4O00746 187 aa16.49■□□□□ 0.23
SREK1-216ENST00000612404 GFRA3O60609 400 aa16.49■□□□□ 0.23
SREK1-216ENST00000612404 CPMP14384 443 aa16.49■□□□□ 0.23
SREK1-216ENST00000612404 HOXB9P17482 250 aaPredicted RBP16.49■□□□□ 0.23
SREK1-216ENST00000612404 TCN1P20061 433 aaPredicted RBP16.49■□□□□ 0.23
SREK1-216ENST00000612404 PPP2R1BP30154 601 aa16.49■□□□□ 0.23
SREK1-216ENST00000612404 ETV5P41161 510 aa16.49■□□□□ 0.23
SREK1-216ENST00000612404 MLC1Q15049 377 aa16.49■□□□□ 0.23
SREK1-216ENST00000612404 SPDYE7PQ495Y7 208 aa16.49■□□□□ 0.23
SREK1-216ENST00000612404 DCAF12Q5T6F0 453 aa16.49■□□□□ 0.23
SREK1-216ENST00000612404 CEACAM20Q6UY09 585 aa16.49■□□□□ 0.23
SREK1-216ENST00000612404 HPS6Q86YV9 775 aa16.49■□□□□ 0.23
SREK1-216ENST00000612404 FBXW8Q8N3Y1 598 aa16.49■□□□□ 0.23
SREK1-216ENST00000612404 OR8J3Q8NGG0 315 aa16.49■□□□□ 0.23
SREK1-216ENST00000612404 OR5AK3PQ8NH89 298 aa16.49■□□□□ 0.23
SREK1-216ENST00000612404 SUN3Q8TAQ9 357 aa16.49■□□□□ 0.23
SREK1-216ENST00000612404 CCDC124Q96CT7 223 aaKnown RBP16.49■□□□□ 0.23
SREK1-216ENST00000612404 SH3GL1Q99961 368 aa16.49■□□□□ 0.23
SREK1-216ENST00000612404 SLC35A5Q9BS91 424 aa16.49■□□□□ 0.23
SREK1-216ENST00000612404 ULBP3Q9BZM4 244 aa16.49■□□□□ 0.23
SREK1-216ENST00000612404 CXorf36Q9H7Y0 433 aa16.49■□□□□ 0.23
SREK1-216ENST00000612404 CLIC1O00299 241 aa16.48■□□□□ 0.23
SREK1-216ENST00000612404 SORBS2O94875 1100 aaKnown RBP16.48■□□□□ 0.23
SREK1-216ENST00000612404 ZCCHC18P0CG32 403 aa16.48■□□□□ 0.23
SREK1-216ENST00000612404 PORP16435 677 aaPredicted RBP16.48■□□□□ 0.23
SREK1-216ENST00000612404 ZNF28P17035 718 aa16.48■□□□□ 0.23
SREK1-216ENST00000612404 CDK9P50750 372 aaKnown RBP16.48■□□□□ 0.23
SREK1-216ENST00000612404 RAB15P59190 212 aa16.48■□□□□ 0.23
SREK1-216ENST00000612404 BTG2P78543 158 aa16.48■□□□□ 0.23
SREK1-216ENST00000612404 DCDP81605 110 aaKnown RBP16.48■□□□□ 0.23
SREK1-216ENST00000612404 STX4Q12846 297 aa16.48■□□□□ 0.23
SREK1-216ENST00000612404 CEACAM7Q14002 265 aa16.48■□□□□ 0.23
SREK1-216ENST00000612404 CEBPEQ15744 281 aa16.48■□□□□ 0.23
SREK1-216ENST00000612404 MINDY4Q4G0A6 757 aa16.48■□□□□ 0.23
SREK1-216ENST00000612404 NKAIN1Q4KMZ8 207 aa16.48■□□□□ 0.23
SREK1-216ENST00000612404 SAMD4BQ5PRF9 694 aaKnown RBP16.48■□□□□ 0.23
SREK1-216ENST00000612404 ANGPTL8Q6UXH0 198 aa16.48■□□□□ 0.23
SREK1-216ENST00000612404 OR9A2Q8NGT5 310 aa16.48■□□□□ 0.23
SREK1-216ENST00000612404 PNPT1Q8TCS8 783 aaKnown RBP16.48■□□□□ 0.23
SREK1-216ENST00000612404 ANKRD9Q96BM1 317 aaPredicted RBP16.48■□□□□ 0.23
SREK1-216ENST00000612404 PHF12Q96QT6 1004 aa16.48■□□□□ 0.23
SREK1-216ENST00000612404 OR1F2PQ96R84 312 aa16.48■□□□□ 0.23
SREK1-216ENST00000612404 IKZF5Q9H5V7 419 aa16.48■□□□□ 0.23
SREK1-216ENST00000612404 PIF1Q9H611 641 aa16.48■□□□□ 0.23
SREK1-216ENST00000612404 ABCD2Q9UBJ2 740 aa16.48■□□□□ 0.23
SREK1-216ENST00000612404 ACSL6Q9UKU0 697 aa16.48■□□□□ 0.23
SREK1-216ENST00000612404 CCDC187A0A096LP49 1063 aa16.48■□□□□ 0.23
SREK1-216ENST00000612404 CTNSO60931 367 aa16.48■□□□□ 0.23
SREK1-216ENST00000612404 C1QCP02747 245 aa16.48■□□□□ 0.23
SREK1-216ENST00000612404 MAOAP21397 527 aa16.48■□□□□ 0.23
SREK1-216ENST00000612404 CHI3L1P36222 383 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms