RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 RAD51AP1Q96B01 352 aa6.6□□□□□ -1.35
PTCHD3P1-201ENST00000612350 PIK3IP1Q96FE7 263 aa6.6□□□□□ -1.35
PTCHD3P1-201ENST00000612350 MARK4Q96L34 752 aa6.6□□□□□ -1.35
PTCHD3P1-201ENST00000612350 WFIKKN1Q96NZ8 548 aa6.6□□□□□ -1.35
PTCHD3P1-201ENST00000612350 GPR21Q99679 349 aa6.6□□□□□ -1.35
PTCHD3P1-201ENST00000612350 GPR22Q99680 433 aa6.6□□□□□ -1.35
PTCHD3P1-201ENST00000612350 PIGQQ9BRB3 760 aa6.6□□□□□ -1.35
PTCHD3P1-201ENST00000612350 RBM24Q9BX46 236 aaKnown RBP6.6□□□□□ -1.35
PTCHD3P1-201ENST00000612350 DEFB126Q9BYW3 111 aa6.6□□□□□ -1.35
PTCHD3P1-201ENST00000612350 ESRP2Q9H6T0 727 aaKnown RBP6.6□□□□□ -1.35
PTCHD3P1-201ENST00000612350 LDAHQ9H6V9 325 aa6.6□□□□□ -1.35
PTCHD3P1-201ENST00000612350 SMYD2Q9NRG4 433 aa6.6□□□□□ -1.35
PTCHD3P1-201ENST00000612350 LANCL2Q9NS86 450 aa6.6□□□□□ -1.35
PTCHD3P1-201ENST00000612350 HCN3Q9P1Z3 774 aa6.6□□□□□ -1.35
PTCHD3P1-201ENST00000612350 RAB21Q9UL25 225 aa6.6□□□□□ -1.35
PTCHD3P1-201ENST00000612350 PSAT1Q9Y617 370 aa6.6□□□□□ -1.35
PTCHD3P1-201ENST00000612350 IGKV1-8A0A0C4DH67 115 aa6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 G3V3Y1 287 aa6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 GFYI3L273 518 aa6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 TXNDC9O14530 226 aa6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 PSIP1O75475 530 aaKnown RBP6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 C1orf105O95561 183 aa6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 IGHA1P01876 353 aa6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 CATP04040 527 aaKnown RBP6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 C8GP07360 202 aa6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 ENO2P09104 434 aaPredicted RBP6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 FAM153BP0C7A2 387 aa6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 STMN1P16949 149 aa6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 ZNF37AP17032 561 aaPredicted RBP6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 CNR1P21554 472 aa6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 CRYGSP22914 178 aa6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 CRABP2P29373 138 aa6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 OPRM1P35372 400 aa6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 MSH2P43246 934 aa6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 CDKN2DP55273 166 aa6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 VSNL1P62760 191 aa6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 TIAL1Q01085 375 aaKnown RBP eCLIP6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 TAP2Q03519 686 aa6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 ARHGAP19Q14CB8 494 aa6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 RASA2Q15283 850 aa6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 ZKSCAN8Q15776 578 aaPredicted RBP6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 NDUFA9Q16795 377 aa6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 ERCC6LQ2NKX8 1250 aa6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 FAM153CQ494X1 144 aa6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 ACSBG2Q5FVE4 666 aa6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 RBM20Q5T481 1227 aaKnown RBP6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 LIPNQ5VXI9 398 aa6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 NSUN5P2Q63ZY6 315 aa6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 ZNF425Q6IV72 752 aa6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 PAQR3Q6TCH7 311 aa6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 CYHR1Q6ZMK1 362 aa6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 GK5Q6ZS86 529 aa6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 MYO1HQ8N1T3 1032 aa6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 APCDD1LQ8NCL9 501 aa6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 GIMAP7Q8NHV1 300 aa6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 MCOLN3Q8TDD5 553 aa6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 SKA2Q8WVK7 121 aaPredicted RBP6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 ASB11Q8WXH4 323 aa6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 CAVIN3Q969G5 261 aa6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 NTNG2Q96CW9 530 aa6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 MTBPQ96DY7 904 aa6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 ZMYND19Q96E35 227 aaPredicted RBP6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 NDNQ99608 321 aa6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 FAM173AQ9BQD7 235 aa6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 PARD6BQ9BYG5 372 aa6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 SHARPINQ9H0F6 387 aa6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 CXorf56Q9H5V9 222 aa6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 SEMA4BQ9NPR2 832 aaPredicted RBP6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 SPATA7Q9P0W8 599 aa6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 ARMCX1Q9P291 453 aa6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 NDRG3Q9UGV2 375 aa6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 ZNF223Q9UK11 482 aaPredicted RBP6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 SLC39A10Q9ULF5 831 aa6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 MALRD1Q5VYJ5 2156 aa6.59□□□□□ -1.35
PTCHD3P1-201ENST00000612350 A0A096LNT2 108 aa6.58□□□□□ -1.36
PTCHD3P1-201ENST00000612350 EXOC1LA0A1B0GW35 172 aa6.58□□□□□ -1.36
PTCHD3P1-201ENST00000612350 KRT87PA6NCN2 255 aa6.58□□□□□ -1.36
PTCHD3P1-201ENST00000612350 PABPN1LA6NDY0 278 aaKnown RBP6.58□□□□□ -1.36
PTCHD3P1-201ENST00000612350 MBD3L3A6NE82 208 aaPredicted RBP6.58□□□□□ -1.36
PTCHD3P1-201ENST00000612350 SAGE2PA6NJ88 616 aa6.58□□□□□ -1.36
PTCHD3P1-201ENST00000612350 SGK494L7N484 410 aa6.58□□□□□ -1.36
PTCHD3P1-201ENST00000612350 MYO1CO00159 1063 aa6.58□□□□□ -1.36
PTCHD3P1-201ENST00000612350 CDC123O75794 336 aaPredicted RBP6.58□□□□□ -1.36
PTCHD3P1-201ENST00000612350 HIST1H2AGP0C0S8 130 aaPredicted RBP6.58□□□□□ -1.36
PTCHD3P1-201ENST00000612350 HIST1H2ADP20671 130 aa6.58□□□□□ -1.36
PTCHD3P1-201ENST00000612350 IDUAP35475 653 aa6.58□□□□□ -1.36
PTCHD3P1-201ENST00000612350 SERPINB8P50452 374 aa6.58□□□□□ -1.36
PTCHD3P1-201ENST00000612350 AP1S2P56377 157 aa6.58□□□□□ -1.36
PTCHD3P1-201ENST00000612350 TAS2R39P59534 338 aa6.58□□□□□ -1.36
PTCHD3P1-201ENST00000612350 RAB10P61026 200 aa6.58□□□□□ -1.36
PTCHD3P1-201ENST00000612350 ATP6V0D1P61421 351 aa6.58□□□□□ -1.36
PTCHD3P1-201ENST00000612350 RELAQ04206 551 aa6.58□□□□□ -1.36
PTCHD3P1-201ENST00000612350 SLC29A2Q14542 456 aa6.58□□□□□ -1.36
PTCHD3P1-201ENST00000612350 NAA25Q14CX7 972 aa6.58□□□□□ -1.36
PTCHD3P1-201ENST00000612350 ETFDHQ16134 617 aa6.58□□□□□ -1.36
PTCHD3P1-201ENST00000612350 PDCD2Q16342 344 aaPredicted RBP6.58□□□□□ -1.36
PTCHD3P1-201ENST00000612350 ZNF750Q32MQ0 723 aa6.58□□□□□ -1.36
PTCHD3P1-201ENST00000612350 CCSMST1Q4G0I0 132 aa6.58□□□□□ -1.36
PTCHD3P1-201ENST00000612350 XKR6Q5GH73 641 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms