RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 HOXD10P28358 340 aa13.35□□□□□ -0.27
COL6A1-207ENST00000612273 DGKGP49619 791 aa13.35□□□□□ -0.27
COL6A1-207ENST00000612273 PRKCDQ05655 676 aa13.35□□□□□ -0.27
COL6A1-207ENST00000612273 ZNF630Q2M218 657 aaPredicted RBP13.35□□□□□ -0.27
COL6A1-207ENST00000612273 TBRG1Q3YBR2 411 aa13.35□□□□□ -0.27
COL6A1-207ENST00000612273 PLPP4Q5VZY2 271 aa13.35□□□□□ -0.27
COL6A1-207ENST00000612273 ZNF517Q6ZMY9 492 aaPredicted RBP13.35□□□□□ -0.27
COL6A1-207ENST00000612273 C6orf120Q7Z4R8 191 aa13.35□□□□□ -0.27
COL6A1-207ENST00000612273 LHFPL3Q86UP9 236 aa13.35□□□□□ -0.27
COL6A1-207ENST00000612273 COMTD1Q86VU5 262 aa13.35□□□□□ -0.27
COL6A1-207ENST00000612273 OR9A1PQ8NGU1 263 aa13.35□□□□□ -0.27
COL6A1-207ENST00000612273 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.35□□□□□ -0.27
COL6A1-207ENST00000612273 KLHL6Q8WZ60 621 aa13.35□□□□□ -0.27
COL6A1-207ENST00000612273 LRR1Q96L50 414 aa13.35□□□□□ -0.27
COL6A1-207ENST00000612273 TRMT61BQ9BVS5 477 aaKnown RBP13.35□□□□□ -0.27
COL6A1-207ENST00000612273 RACGAP1Q9H0H5 632 aa13.35□□□□□ -0.27
COL6A1-207ENST00000612273 SPHK2Q9NRA0 654 aa13.35□□□□□ -0.27
COL6A1-207ENST00000612273 EIF3FO00303 357 aaPredicted RBP13.35□□□□□ -0.27
COL6A1-207ENST00000612273 KLHL18O94889 574 aa13.35□□□□□ -0.27
COL6A1-207ENST00000612273 ARAFP10398 606 aa13.35□□□□□ -0.27
COL6A1-207ENST00000612273 CTSAP10619 480 aa13.35□□□□□ -0.27
COL6A1-207ENST00000612273 AGAP6Q5VW22 663 aa13.35□□□□□ -0.27
COL6A1-207ENST00000612273 FAM71E1Q6IPT2 247 aa13.35□□□□□ -0.27
COL6A1-207ENST00000612273 ERAP2Q6P179 960 aa13.35□□□□□ -0.27
COL6A1-207ENST00000612273 NXPE4Q6UWF7 544 aa13.35□□□□□ -0.27
COL6A1-207ENST00000612273 ZNF367Q7RTV3 350 aa13.35□□□□□ -0.27
COL6A1-207ENST00000612273 IQCHQ86VS3 1027 aa13.35□□□□□ -0.27
COL6A1-207ENST00000612273 TMC8Q8IU68 726 aa13.35□□□□□ -0.27
COL6A1-207ENST00000612273 NLGN4YQ8NFZ3 816 aaPredicted RBP13.35□□□□□ -0.27
COL6A1-207ENST00000612273 SLC9A6Q92581 669 aa13.35□□□□□ -0.27
COL6A1-207ENST00000612273 AGAP4Q96P64 663 aa13.35□□□□□ -0.27
COL6A1-207ENST00000612273 RMI1Q9H9A7 625 aa13.35□□□□□ -0.27
COL6A1-207ENST00000612273 TDP1Q9NUW8 608 aa13.35□□□□□ -0.27
COL6A1-207ENST00000612273 PAQR5Q9NXK6 330 aaPredicted RBP13.35□□□□□ -0.27
COL6A1-207ENST00000612273 KLHL42Q9P2K6 505 aa13.35□□□□□ -0.27
COL6A1-207ENST00000612273 FTSJ1Q9UET6 329 aa13.35□□□□□ -0.27
COL6A1-207ENST00000612273 NOX1Q9Y5S8 564 aa13.35□□□□□ -0.27
COL6A1-207ENST00000612273 ANAPC1Q9H1A4 1944 aa13.35□□□□□ -0.27
COL6A1-207ENST00000612273 F5P12259 2224 aa13.35□□□□□ -0.27
COL6A1-207ENST00000612273 ZAR1LA6NP61 321 aa13.35□□□□□ -0.27
COL6A1-207ENST00000612273 HIDE1A8MVS5 230 aa13.35□□□□□ -0.27
COL6A1-207ENST00000612273 PLPP1O14494 284 aa13.35□□□□□ -0.27
COL6A1-207ENST00000612273 SLITRK5O94991 958 aa13.35□□□□□ -0.27
COL6A1-207ENST00000612273 H1F0P07305 194 aaKnown RBP13.35□□□□□ -0.27
COL6A1-207ENST00000612273 GSTM5P46439 218 aa13.35□□□□□ -0.27
COL6A1-207ENST00000612273 PRLHRP49683 370 aa13.35□□□□□ -0.27
COL6A1-207ENST00000612273 SNAPC1Q16533 368 aa13.35□□□□□ -0.27
COL6A1-207ENST00000612273 TIMM50Q3ZCQ8 353 aa13.35□□□□□ -0.27
COL6A1-207ENST00000612273 ZFP69Q49AA0 526 aa13.35□□□□□ -0.27
COL6A1-207ENST00000612273 PYDC2Q56P42 97 aa13.35□□□□□ -0.27
COL6A1-207ENST00000612273 PRAMEF14Q5SWL7 426 aa13.35□□□□□ -0.27
COL6A1-207ENST00000612273 PRAMEF13Q5VWM6 474 aa13.35□□□□□ -0.27
COL6A1-207ENST00000612273 PAMR1Q6UXH9 720 aa13.35□□□□□ -0.27
COL6A1-207ENST00000612273 ADGRF3Q8IZF5 1079 aa13.35□□□□□ -0.27
COL6A1-207ENST00000612273 CPXM2Q8N436 756 aa13.35□□□□□ -0.27
COL6A1-207ENST00000612273 POP5Q969H6 163 aaKnown RBP13.35□□□□□ -0.27
COL6A1-207ENST00000612273 A0A1B0GVC2 190 aa13.34□□□□□ -0.27
COL6A1-207ENST00000612273 A0A1W2PQL4 384 aaPredicted RBP13.34□□□□□ -0.27
COL6A1-207ENST00000612273 A0A1W2PS29 197 aa13.34□□□□□ -0.27
COL6A1-207ENST00000612273 A6NIN4 97 aa13.34□□□□□ -0.27
COL6A1-207ENST00000612273 B4GALT2O60909 372 aa13.34□□□□□ -0.27
COL6A1-207ENST00000612273 NCR1O76036 304 aa13.34□□□□□ -0.27
COL6A1-207ENST00000612273 FGF18O76093 207 aa13.34□□□□□ -0.27
COL6A1-207ENST00000612273 ZNF30P17039 623 aa13.34□□□□□ -0.27
COL6A1-207ENST00000612273 SDC2P34741 201 aa13.34□□□□□ -0.27
COL6A1-207ENST00000612273 SLC7A9P82251 487 aa13.34□□□□□ -0.27
COL6A1-207ENST00000612273 FCHO2Q0JRZ9 810 aa13.34□□□□□ -0.27
COL6A1-207ENST00000612273 CDC20Q12834 499 aa13.34□□□□□ -0.27
COL6A1-207ENST00000612273 GINS1Q14691 196 aa13.34□□□□□ -0.27
COL6A1-207ENST00000612273 MPP7Q5T2T1 576 aa13.34□□□□□ -0.27
COL6A1-207ENST00000612273 TTC23LQ6PF05 361 aa13.34□□□□□ -0.27
COL6A1-207ENST00000612273 METTL3Q86U44 580 aaKnown RBP13.34□□□□□ -0.27
COL6A1-207ENST00000612273 NLRP8Q86W28 1048 aa13.34□□□□□ -0.27
COL6A1-207ENST00000612273 NACC2Q96BF6 587 aa13.34□□□□□ -0.27
COL6A1-207ENST00000612273 REPS1Q96D71 796 aa13.34□□□□□ -0.27
COL6A1-207ENST00000612273 DEPDC7Q96QD5 511 aa13.34□□□□□ -0.27
COL6A1-207ENST00000612273 OR2A14Q96R47 310 aa13.34□□□□□ -0.27
COL6A1-207ENST00000612273 MAPKAP1Q9BPZ7 522 aa13.34□□□□□ -0.27
COL6A1-207ENST00000612273 EGLN3Q9H6Z9 239 aa13.34□□□□□ -0.27
COL6A1-207ENST00000612273 CREBZFQ9NS37 354 aa13.34□□□□□ -0.27
COL6A1-207ENST00000612273 ATP6V1HQ9UI12 483 aa13.34□□□□□ -0.27
COL6A1-207ENST00000612273 MKLN1Q9UL63 735 aa13.34□□□□□ -0.27
COL6A1-207ENST00000612273 OR1F1O43749 312 aa13.34□□□□□ -0.27
COL6A1-207ENST00000612273 TSPAN19P0C672 248 aa13.34□□□□□ -0.27
COL6A1-207ENST00000612273 ELAVL4P26378 380 aaKnown RBP13.34□□□□□ -0.27
COL6A1-207ENST00000612273 WASP42768 502 aa13.34□□□□□ -0.27
COL6A1-207ENST00000612273 KCNC3Q14003 757 aa13.34□□□□□ -0.27
COL6A1-207ENST00000612273 CRTC2Q53ET0 693 aaPredicted RBP13.34□□□□□ -0.27
COL6A1-207ENST00000612273 ZDHHC20Q5W0Z9 365 aa13.34□□□□□ -0.27
COL6A1-207ENST00000612273 ACSM5Q6NUN0 579 aa13.34□□□□□ -0.27
COL6A1-207ENST00000612273 CCDC190Q86UF4 302 aa13.34□□□□□ -0.27
COL6A1-207ENST00000612273 JPH3Q8WXH2 748 aaPredicted RBP13.34□□□□□ -0.27
COL6A1-207ENST00000612273 ASB15Q8WXK1 588 aa13.34□□□□□ -0.27
COL6A1-207ENST00000612273 CRELD1Q96HD1 420 aa13.34□□□□□ -0.27
COL6A1-207ENST00000612273 SLC6A18Q96N87 628 aa13.34□□□□□ -0.27
COL6A1-207ENST00000612273 C17orf62Q9BQA9 187 aa13.34□□□□□ -0.27
COL6A1-207ENST00000612273 EFCAB11Q9BUY7 163 aa13.34□□□□□ -0.27
COL6A1-207ENST00000612273 RNF208Q9H0X6 261 aa13.34□□□□□ -0.27
COL6A1-207ENST00000612273 TBC1D17Q9HA65 648 aa13.34□□□□□ -0.27
COL6A1-207ENST00000612273 SSR3Q9UNL2 185 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms