RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 MC3RP41968 323 aa14.06□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 CDK9P50750 372 aaKnown RBP14.06□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 ID2Q02363 134 aa14.06□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 TGM3Q08188 693 aa14.06□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 PDAP1Q13442 181 aaKnown RBP14.06□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 LYPD8Q6UX82 237 aa14.06□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 PLEKHM3Q6ZWE6 761 aa14.06□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 PACS2Q86VP3 889 aa14.06□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 KRT78Q8N1N4 520 aa14.06□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 TMEM171Q8WVE6 324 aa14.06□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 INTS12Q96CB8 462 aaKnown RBP14.06□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 RBM18Q96H35 190 aaKnown RBP14.06□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 QRFPRQ96P65 431 aa14.06□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 DGAT2Q96PD7 388 aa14.06□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 PRM3Q9NNZ6 103 aa14.06□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 RYDENQ9NUL5 291 aaKnown RBP14.06□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 KLHL28Q9NXS3 571 aa14.06□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 PACSIN3Q9UKS6 424 aa14.06□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 CNOT11Q9UKZ1 510 aaKnown RBP14.06□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 ANKRD33BA6NCL7 494 aa14.05□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 CAPN14A8MX76 684 aa14.05□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 SNPHO15079 494 aa14.05□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 RCBTB2O95199 551 aa14.05□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 GNAZP19086 355 aa14.05□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 ANP32AP39687 249 aaKnown RBP14.05□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 EEF1A1P68104 462 aaKnown RBP14.05□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 TIAL1Q01085 375 aaKnown RBP eCLIP14.05□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 SLBPQ14493 270 aaKnown RBP eCLIP14.05□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 HSP90AA5PQ58FG0 334 aa14.05□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 DCST1Q5T197 706 aa14.05□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 EEF1A1P5Q5VTE0 462 aa14.05□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 SCIMPQ6UWF3 145 aa14.05□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 GCNT2Q8N0V5 402 aa14.05□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 TAGAPQ8N103 731 aa14.05□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 SLC44A1Q8WWI5 657 aa14.05□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 RILPQ96NA2 401 aa14.05□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 WFIKKN1Q96NZ8 548 aa14.05□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 GNRHR2Q96P88 292 aa14.05□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 FAM111AQ96PZ2 611 aa14.05□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 EGFL8Q99944 293 aa14.05□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 CXorf56Q9H5V9 222 aa14.05□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 IARS2Q9NSE4 1012 aaKnown RBP14.05□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 REXO2Q9Y3B8 237 aaKnown RBP14.05□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 IKBKGQ9Y6K9 419 aa14.05□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 NCKAP5O14513 1909 aa14.04□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 KIAA1549Q9HCM3 1950 aa14.04□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 IQANK1A0A1B0GTG1 560 aa14.04□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 A8MXE2 369 aa14.04□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 H0Y3Z8 333 aa14.04□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 SIAH2O43255 324 aa14.04□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 CLEC3AO75596 197 aa14.04□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 SNX4O95219 450 aa14.04□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 ACTL6AO96019 429 aa14.04□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 C1GALT1C1LP0DN25 315 aa14.04□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 CRYGSP22914 178 aa14.04□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 SLCO1A2P46721 670 aa14.04□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 NR1H2P55055 460 aa14.04□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 CDKN2DP55273 166 aa14.04□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 ATP5J2P56134 94 aa14.04□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 KRTAP1-1Q07627 177 aa14.04□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 KIF5AQ12840 1032 aa14.04□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 TNK1Q13470 666 aa14.04□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 GAB1Q13480 694 aa14.04□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 NTRK2Q16620 822 aa14.04□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 EIPR1Q53HC9 387 aa14.04□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 WIPI1Q5MNZ9 446 aaPredicted RBP14.04□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 ABHD17CQ6PCB6 329 aa14.04□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 DRICH1Q6PGQ1 229 aaPredicted RBP14.04□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 TXLNBQ8N3L3 684 aa14.04□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 UCN3Q969E3 161 aa14.04□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 ROGDIQ9GZN7 287 aa14.04□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 UBQLN3Q9H347 655 aa14.04□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 C15orf41Q9Y2V0 281 aa14.04□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 ZANQ9Y493 2812 aa14.04□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 PHF1O43189 567 aaPredicted RBP14.03□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 TLX2O43763 284 aaPredicted RBP14.03□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 SMNDC1O75940 238 aaKnown RBP eCLIP14.03□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 IGKV3-11P04433 115 aa14.03□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 STT3AP46977 705 aa14.03□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 KCNC1P48547 511 aa14.03□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 PLIN5Q00G26 463 aa14.03□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 SRYQ05066 204 aa14.03□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 FAM27E3Q08E93 113 aa14.03□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 RPS6KA2Q15349 733 aa14.03□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 TRIP13Q15645 432 aaPredicted RBP14.03□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 CHRFAM7AQ494W8 412 aa14.03□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 RBM20Q5T481 1227 aaKnown RBP14.03□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 C10orf62Q5T681 223 aaPredicted RBP14.03□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 CAND1Q86VP6 1230 aaKnown RBP14.03□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 HIPK1Q86Z02 1210 aa14.03□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 MAPK1IP1LQ8NDC0 245 aa14.03□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 PPWD1Q96BP3 646 aaKnown RBP14.03□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 KCNC2Q96PR1 638 aa14.03□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 MAPKAP1Q9BPZ7 522 aa14.03□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 TUBA1CQ9BQE3 449 aa14.03□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 LYRM4Q9HD34 91 aa14.03□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 NBEAL1Q6ZS30 2694 aa14.03□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 TLN2Q9Y4G6 2542 aa14.02□□□□□ -0.16
NEDD8-MDP1-204ENST00000605847 RNF223E7ERA6 249 aa14.02□□□□□ -0.17
NEDD8-MDP1-204ENST00000605847 WDR47O94967 919 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms