RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 U3KQA8 63 aa11.59□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 A0A087WV62 115 aa11.58□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 HYKKA2RU49 373 aa11.58□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 PGRMC2O15173 223 aa11.58□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 EMC8O43402 210 aa11.58□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 SIGLEC6O43699 453 aa11.58□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 DPM1O60762 260 aa11.58□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 PRSS23O95084 383 aa11.58□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 CPNE6O95741 557 aa11.58□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 AGR2O95994 175 aa11.58□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 EIF2S1P05198 315 aaKnown RBP11.58□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 RNH1P13489 461 aaKnown RBP11.58□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 NCK1P16333 377 aa11.58□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 CSF2RBP32927 897 aa11.58□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 KDELR2P33947 212 aa11.58□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 GALNSP34059 522 aa11.58□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 GPC1P35052 558 aa11.58□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 SOAT1P35610 550 aa11.58□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 MAGEA2P43356 314 aa11.58□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 AVPR1BP47901 424 aa11.58□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 HSPA13P48723 471 aa11.58□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 CCT3P49368 545 aaKnown RBP11.58□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 ARSFP54793 590 aa11.58□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 SESN3P58005 492 aa11.58□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 DSTNP60981 165 aa11.58□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 IGLV3-21P80748 117 aaPredicted RBP11.58□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 CFHR1Q03591 330 aa11.58□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 EEF1A2Q05639 463 aaKnown RBP11.58□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 HSPB3Q12988 150 aa11.58□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 TRIP10Q15642 601 aa11.58□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 PROX2Q3B8N5 592 aa11.58□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 CRB2Q5IJ48 1285 aa11.58□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 WLSQ5T9L3 541 aa11.58□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 DBX2Q6ZNG2 339 aa11.58□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 CBLL1Q75N03 491 aa11.58□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 EIF3MQ7L2H7 374 aaKnown RBP11.58□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 PATL1Q86TB9 770 aaKnown RBP11.58□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 PDSS2Q86YH6 399 aa11.58□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 ZNF595Q8IYB9 648 aa11.58□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 LILRA2Q8N149 483 aa11.58□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 C10orf111Q8N326 155 aa11.58□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 NRG4Q8WWG1 115 aa11.58□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 N4BP2L2Q92802 583 aaPredicted RBP11.58□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 CENPNQ96H22 339 aaPredicted RBP11.58□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 ZNF184Q99676 751 aaPredicted RBP11.58□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 PELOQ9BRX2 385 aaKnown RBP11.58□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 KLHL4Q9C0H6 718 aa11.58□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 CDC14AQ9UNH5 594 aa11.58□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 USP22Q9UPT9 525 aa11.58□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 ANGPT4Q9Y264 503 aa11.58□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 ZNF318Q5VUA4 2279 aa11.58□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 SPTBP11277 2137 aa11.57□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 COL27A1Q8IZC6 1860 aaPredicted RBP11.57□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 FER1L5A0AVI2 2057 aa11.57□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 TMEM247A6NEH6 219 aa11.57□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 GALR2O43603 387 aaPredicted RBP11.57□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 KIF1CO43896 1103 aaKnown RBP11.57□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 PRAMEF10O60809 474 aa11.57□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 DEAF1O75398 565 aaPredicted RBP11.57□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 ERAL1O75616 437 aaKnown RBP11.57□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 PDE9AO76083 593 aa11.57□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 GPR75O95800 540 aa11.57□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 STATHP02808 62 aa11.57□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 GP1BAP07359 652 aa11.57□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 CPMP14384 443 aa11.57□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 ACADSP16219 412 aa11.57□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 PORP16435 677 aaPredicted RBP11.57□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 MPLP40238 635 aa11.57□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 CRATP43155 626 aa11.57□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 PRIM2P49643 509 aa11.57□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 ARL4DP49703 201 aa11.57□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 KHKP50053 298 aa11.57□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 CDK9P50750 372 aaKnown RBP11.57□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 ATXN3P54252 364 aaPredicted RBP11.57□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 PCBP3P57721 371 aaKnown RBP11.57□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 TRA2AQ13595 282 aaKnown RBP eCLIP11.57□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 MYBPC3Q14896 1274 aa11.57□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 ATP6AP1Q15904 470 aa11.57□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 SPDYE7PQ495Y7 208 aa11.57□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.57□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 PLA2G2CQ5R387 149 aa11.57□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.57□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 ZCCHC12Q6PEW1 402 aa11.57□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 C6orf120Q7Z4R8 191 aa11.57□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 BPHLQ86WA6 291 aaPredicted RBP11.57□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 RNF130Q86XS8 419 aa11.57□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 LGI4Q8N135 537 aa11.57□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 RASSF5Q8WWW0 418 aa11.57□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 PYURFQ96I23 114 aa11.57□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 SLC35G5Q96KT7 338 aa11.57□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 ZNF578Q96N58 590 aaPredicted RBP11.57□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 BTBD9Q96Q07 612 aa11.57□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 OR1F2PQ96R84 312 aa11.57□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 PKP2Q99959 881 aa11.57□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 BDH2Q9BUT1 245 aa11.57□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 OSBPL10Q9BXB5 764 aa11.57□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 ADPRHL2Q9NX46 363 aa11.57□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 GIN1Q9NXP7 522 aa11.57□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 SRPK3Q9UPE1 567 aa11.57□□□□□ -0.56
NEDD8-MDP1-203ENST00000604306 AURKCQ9UQB9 309 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms