RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 PLIN5Q00G26 463 aa12.97□□□□□ -0.33
RNF40-212ENST00000602784 ID2Q02363 134 aa12.97□□□□□ -0.33
RNF40-212ENST00000602784 EMX2Q04743 252 aa12.97□□□□□ -0.33
RNF40-212ENST00000602784 MAD2L1Q13257 205 aaPredicted RBP12.97□□□□□ -0.33
RNF40-212ENST00000602784 BTBD16Q32M84 506 aa12.97□□□□□ -0.33
RNF40-212ENST00000602784 GALNTL6Q49A17 601 aa12.97□□□□□ -0.33
RNF40-212ENST00000602784 HPS6Q86YV9 775 aa12.97□□□□□ -0.33
RNF40-212ENST00000602784 CRLF3Q8IUI8 442 aa12.97□□□□□ -0.33
RNF40-212ENST00000602784 OR4N5Q8IXE1 308 aa12.97□□□□□ -0.33
RNF40-212ENST00000602784 MORN4Q8NDC4 146 aa12.97□□□□□ -0.33
RNF40-212ENST00000602784 FDCSPQ8NFU4 85 aa12.97□□□□□ -0.33
RNF40-212ENST00000602784 OR14A16Q8NHC5 309 aa12.97□□□□□ -0.33
RNF40-212ENST00000602784 PIWIL2Q8TC59 973 aaKnown RBP12.97□□□□□ -0.33
RNF40-212ENST00000602784 ELP5Q8TE02 316 aa12.97□□□□□ -0.33
RNF40-212ENST00000602784 PTPMT1Q8WUK0 201 aaPredicted RBP12.97□□□□□ -0.33
RNF40-212ENST00000602784 UCN3Q969E3 161 aa12.97□□□□□ -0.33
RNF40-212ENST00000602784 TUBGCP3Q96CW5 907 aa12.97□□□□□ -0.33
RNF40-212ENST00000602784 ABHD17AQ96GS6 310 aa12.97□□□□□ -0.33
RNF40-212ENST00000602784 ZNF764Q96H86 408 aaPredicted RBP12.97□□□□□ -0.33
RNF40-212ENST00000602784 THOC3Q96J01 351 aaKnown RBP12.97□□□□□ -0.33
RNF40-212ENST00000602784 DGAT2Q96PD7 388 aa12.97□□□□□ -0.33
RNF40-212ENST00000602784 SMAD5Q99717 465 aaKnown RBP12.97□□□□□ -0.33
RNF40-212ENST00000602784 EBPLQ9BY08 206 aa12.97□□□□□ -0.33
RNF40-212ENST00000602784 GPR83Q9NYM4 423 aa12.97□□□□□ -0.33
RNF40-212ENST00000602784 C5AR2Q9P296 337 aa12.97□□□□□ -0.33
RNF40-212ENST00000602784 HEY2Q9UBP5 337 aa12.97□□□□□ -0.33
RNF40-212ENST00000602784 POLR3HQ9Y535 204 aaPredicted RBP12.97□□□□□ -0.33
RNF40-212ENST00000602784 DOCK10Q96BY6 2186 aa12.96□□□□□ -0.33
RNF40-212ENST00000602784 A6NL46 340 aa12.96□□□□□ -0.33
RNF40-212ENST00000602784 DYRK3O43781 588 aa12.96□□□□□ -0.33
RNF40-212ENST00000602784 PRPS2P11908 318 aa12.96□□□□□ -0.33
RNF40-212ENST00000602784 CPMP14384 443 aa12.96□□□□□ -0.33
RNF40-212ENST00000602784 PORP16435 677 aaPredicted RBP12.96□□□□□ -0.33
RNF40-212ENST00000602784 PCSK2P16519 638 aa12.96□□□□□ -0.33
RNF40-212ENST00000602784 SDC1P18827 310 aa12.96□□□□□ -0.33
RNF40-212ENST00000602784 CSNK2A2P19784 350 aaPredicted RBP12.96□□□□□ -0.33
RNF40-212ENST00000602784 DDCP20711 480 aa12.96□□□□□ -0.33
RNF40-212ENST00000602784 TACR1P25103 407 aa12.96□□□□□ -0.33
RNF40-212ENST00000602784 XKP51811 444 aa12.96□□□□□ -0.33
RNF40-212ENST00000602784 C2orf80Q0P641 193 aa12.96□□□□□ -0.33
RNF40-212ENST00000602784 VWA5B1Q5TIE3 1220 aa12.96□□□□□ -0.33
RNF40-212ENST00000602784 AGAP7PQ5VUJ5 663 aa12.96□□□□□ -0.33
RNF40-212ENST00000602784 H3F3CQ6NXT2 135 aa12.96□□□□□ -0.33
RNF40-212ENST00000602784 WDR75Q8IWA0 830 aaKnown RBP12.96□□□□□ -0.33
RNF40-212ENST00000602784 MMP21Q8N119 569 aa12.96□□□□□ -0.33
RNF40-212ENST00000602784 C9orf43Q8TAL5 461 aaPredicted RBP12.96□□□□□ -0.33
RNF40-212ENST00000602784 PSMF1Q92530 271 aa12.96□□□□□ -0.33
RNF40-212ENST00000602784 ZNF681Q96N22 645 aa12.96□□□□□ -0.33
RNF40-212ENST00000602784 AGAP4Q96P64 663 aa12.96□□□□□ -0.33
RNF40-212ENST00000602784 LMF1Q96S06 567 aa12.96□□□□□ -0.33
RNF40-212ENST00000602784 NUF2Q9BZD4 464 aa12.96□□□□□ -0.33
RNF40-212ENST00000602784 ZNF552Q9H707 407 aaPredicted RBP12.96□□□□□ -0.33
RNF40-212ENST00000602784 AKTIPQ9H8T0 292 aa12.96□□□□□ -0.33
RNF40-212ENST00000602784 ASIC5Q9NY37 505 aa12.96□□□□□ -0.33
RNF40-212ENST00000602784 ZNF451Q9Y4E5 1061 aa12.96□□□□□ -0.33
RNF40-212ENST00000602784 ZNF780BQ9Y6R6 833 aa12.96□□□□□ -0.33
RNF40-212ENST00000602784 ATRXP46100 2492 aa12.96□□□□□ -0.34
RNF40-212ENST00000602784 A8MUA0 341 aa12.95□□□□□ -0.34
RNF40-212ENST00000602784 C17orf105B2RV13 164 aa12.95□□□□□ -0.34
RNF40-212ENST00000602784 OR10H2O60403 315 aa12.95□□□□□ -0.34
RNF40-212ENST00000602784 TBX19O60806 448 aa12.95□□□□□ -0.34
RNF40-212ENST00000602784 TGDSO95455 350 aa12.95□□□□□ -0.34
RNF40-212ENST00000602784 ATP1B1P05026 303 aa12.95□□□□□ -0.34
RNF40-212ENST00000602784 ITGAMP11215 1152 aa12.95□□□□□ -0.34
RNF40-212ENST00000602784 TNNI3P19429 210 aa12.95□□□□□ -0.34
RNF40-212ENST00000602784 ALDH9A1P49189 494 aa12.95□□□□□ -0.34
RNF40-212ENST00000602784 PGDP52209 483 aa12.95□□□□□ -0.34
RNF40-212ENST00000602784 ERVK-8P63133 956 aa12.95□□□□□ -0.34
RNF40-212ENST00000602784 SPRED3Q2MJR0 410 aa12.95□□□□□ -0.34
RNF40-212ENST00000602784 CRB2Q5IJ48 1285 aa12.95□□□□□ -0.34
RNF40-212ENST00000602784 OGFOD2Q6N063 350 aa12.95□□□□□ -0.34
RNF40-212ENST00000602784 IGFL2Q6UWQ7 119 aa12.95□□□□□ -0.34
RNF40-212ENST00000602784 IGFL3Q6UXB1 125 aa12.95□□□□□ -0.34
RNF40-212ENST00000602784 LARP4Q71RC2 724 aaKnown RBP eCLIP12.95□□□□□ -0.34
RNF40-212ENST00000602784 ARMC10Q8N2F6 343 aa12.95□□□□□ -0.34
RNF40-212ENST00000602784 FNDC5Q8NAU1 212 aa12.95□□□□□ -0.34
RNF40-212ENST00000602784 APCDD1LQ8NCL9 501 aa12.95□□□□□ -0.34
RNF40-212ENST00000602784 RIT1Q92963 219 aa12.95□□□□□ -0.34
RNF40-212ENST00000602784 KLHL29Q96CT2 875 aa12.95□□□□□ -0.34
RNF40-212ENST00000602784 MTERF3Q96E29 417 aa12.95□□□□□ -0.34
RNF40-212ENST00000602784 VMP1Q96GC9 406 aa12.95□□□□□ -0.34
RNF40-212ENST00000602784 EGLN2Q96KS0 407 aa12.95□□□□□ -0.34
RNF40-212ENST00000602784 ART5Q96L15 291 aa12.95□□□□□ -0.34
RNF40-212ENST00000602784 NUDT9Q9BW91 350 aa12.95□□□□□ -0.34
RNF40-212ENST00000602784 SEMA4CQ9C0C4 833 aa12.95□□□□□ -0.34
RNF40-212ENST00000602784 SLC25A18Q9H1K4 315 aa12.95□□□□□ -0.34
RNF40-212ENST00000602784 CXorf21Q9HAI6 301 aa12.95□□□□□ -0.34
RNF40-212ENST00000602784 SLC35C2Q9NQQ7 365 aa12.95□□□□□ -0.34
RNF40-212ENST00000602784 NOP53Q9NZM5 478 aaKnown RBP12.95□□□□□ -0.34
RNF40-212ENST00000602784 TEKT2Q9UIF3 430 aa12.95□□□□□ -0.34
RNF40-212ENST00000602784 UTS2RQ9UKP6 389 aa12.95□□□□□ -0.34
RNF40-212ENST00000602784 EXO1Q9UQ84 846 aaKnown RBP12.95□□□□□ -0.34
RNF40-212ENST00000602784 EIF3LQ9Y262 564 aaKnown RBP12.95□□□□□ -0.34
RNF40-212ENST00000602784 MYOCOSA0A1B0GUC4 107 aa12.94□□□□□ -0.34
RNF40-212ENST00000602784 CDK2AP1O14519 115 aa12.94□□□□□ -0.34
RNF40-212ENST00000602784 SDHDO14521 159 aa12.94□□□□□ -0.34
RNF40-212ENST00000602784 ZNF195O14628 629 aa12.94□□□□□ -0.34
RNF40-212ENST00000602784 ERAL1O75616 437 aaKnown RBP12.94□□□□□ -0.34
RNF40-212ENST00000602784 DDAH2O95865 285 aa12.94□□□□□ -0.34
RNF40-212ENST00000602784 CELA2AP08217 269 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms