RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 TBCEQ15813 527 aaPredicted RBP8.47□□□□□ -1.05
COMMD3-215ENST00000602574 USF2Q15853 346 aaPredicted RBP8.47□□□□□ -1.05
COMMD3-215ENST00000602574 HAGHQ16775 308 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 CBWD6Q4V339 395 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 KLHL22Q53GT1 634 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 PYY3Q5JQD4 70 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 TAPT1Q6NXT6 567 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 ZNF655Q8N720 491 aaPredicted RBP8.47□□□□□ -1.05
COMMD3-215ENST00000602574 OIT3Q8WWZ8 545 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 ACOT11Q8WXI4 607 aaPredicted RBP8.47□□□□□ -1.05
COMMD3-215ENST00000602574 OR1E3Q8WZA6 343 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 THRSPQ92748 146 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 EXT2Q93063 718 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 ORAI1Q96D31 301 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 CLUHP3Q96NS8 147 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 OR2M2Q96R28 347 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 ELF4Q99607 663 aaPredicted RBP8.47□□□□□ -1.05
COMMD3-215ENST00000602574 PRR14Q9BWN1 585 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 SLC25A32Q9H2D1 315 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 EPHX3Q9H6B9 360 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 SMPD4Q9NXE4 827 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 GPR34Q9UPC5 381 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 ZNF638Q14966 1978 aaKnown RBP8.47□□□□□ -1.05
COMMD3-215ENST00000602574 TMEM88BA6NKF7 163 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 DISC1C4P0D8 188 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 CYR61O00622 381 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 ICOSLGO75144 302 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 THBS1P07996 1170 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 SNRPB2P08579 225 aaKnown RBP8.47□□□□□ -1.05
COMMD3-215ENST00000602574 RD3LP0DJH9 198 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 NT5EP21589 574 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 TEAD1P28347 426 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 SLC12A3P55017 1021 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 EEFSECP57772 596 aaKnown RBP8.47□□□□□ -1.05
COMMD3-215ENST00000602574 HOXC5Q00444 222 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 REEP5Q00765 189 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 CDK5R2Q13319 367 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 ACTBL2Q562R1 376 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 FAM26FQ5R3K3 315 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 CYP2R1Q6VVX0 501 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 CIR1Q86X95 450 aaPredicted RBP8.47□□□□□ -1.05
COMMD3-215ENST00000602574 ADGRF3Q8IZF5 1079 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 PUSL1Q8N0Z8 303 aaKnown RBP8.47□□□□□ -1.05
COMMD3-215ENST00000602574 KHSRPQ92945 711 aaKnown RBP eCLIP8.47□□□□□ -1.051e-11■■□□□ 14
COMMD3-215ENST00000602574 SHDQ96IW2 340 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 OR14A2Q96R54 314 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 TSNAXQ99598 290 aaKnown RBP8.47□□□□□ -1.05
COMMD3-215ENST00000602574 SARGQ9BW04 601 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 BARHL1Q9BZE3 327 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 SPON1Q9HCB6 807 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 GALNT9Q9HCQ5 603 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 CHRAC1Q9NRG0 131 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 PARPBPQ9NWS1 579 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 CACNA2D2Q9NY47 1150 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 PAK5Q9P286 719 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 ADAM28Q9UKQ2 775 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 NDRG2Q9UN36 371 aaKnown RBP8.47□□□□□ -1.05
COMMD3-215ENST00000602574 AKT3Q9Y243 479 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 ASB1Q9Y576 335 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 GPR45Q9Y5Y3 372 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 DNMT3AQ9Y6K1 912 aaPredicted RBP8.47□□□□□ -1.05
COMMD3-215ENST00000602574 SHANK3Q9BYB0 1731 aa8.47□□□□□ -1.05
COMMD3-215ENST00000602574 MEIKINA0A087WXM9 373 aa8.46□□□□□ -1.05
COMMD3-215ENST00000602574 TMEM218A2RU14 115 aa8.46□□□□□ -1.05
COMMD3-215ENST00000602574 INMT-MINDY4F8WBC2 141 aa8.46□□□□□ -1.05
COMMD3-215ENST00000602574 C6orf229H3BNL8 230 aa8.46□□□□□ -1.05
COMMD3-215ENST00000602574 K7EP13 123 aa8.46□□□□□ -1.05
COMMD3-215ENST00000602574 SYT5O00445 386 aa8.46□□□□□ -1.05
COMMD3-215ENST00000602574 SLC16A4O15374 487 aa8.46□□□□□ -1.05
COMMD3-215ENST00000602574 GGCTO75223 188 aaKnown RBP8.46□□□□□ -1.05
COMMD3-215ENST00000602574 IFNB1P01574 187 aa8.46□□□□□ -1.05
COMMD3-215ENST00000602574 TBXA2RP21731 343 aa8.46□□□□□ -1.05
COMMD3-215ENST00000602574 ITPKAP23677 461 aa8.46□□□□□ -1.05
COMMD3-215ENST00000602574 DTYMKP23919 212 aa8.46□□□□□ -1.05
COMMD3-215ENST00000602574 BDKRB2P30411 391 aa8.46□□□□□ -1.05
COMMD3-215ENST00000602574 IDH3GP51553 393 aaPredicted RBP8.46□□□□□ -1.05
COMMD3-215ENST00000602574 CEBPGP53567 150 aa8.46□□□□□ -1.05
COMMD3-215ENST00000602574 PURAQ00577 322 aaKnown RBP8.46□□□□□ -1.05
COMMD3-215ENST00000602574 PCLAFQ15004 111 aa8.46□□□□□ -1.05
COMMD3-215ENST00000602574 SF3A2Q15428 464 aaKnown RBP8.46□□□□□ -1.05
COMMD3-215ENST00000602574 FCN2Q15485 313 aa8.46□□□□□ -1.05
COMMD3-215ENST00000602574 NDUFAF6Q330K2 333 aa8.46□□□□□ -1.05
COMMD3-215ENST00000602574 GPR153Q6NV75 609 aa8.46□□□□□ -1.05
COMMD3-215ENST00000602574 PRSS57Q6UWY2 283 aa8.46□□□□□ -1.05
COMMD3-215ENST00000602574 HSDL2Q6YN16 418 aa8.46□□□□□ -1.05
COMMD3-215ENST00000602574 ZCCHC23Q6ZST2 131 aa8.46□□□□□ -1.05
COMMD3-215ENST00000602574 CMTR1Q8N1G2 835 aaKnown RBP8.46□□□□□ -1.05
COMMD3-215ENST00000602574 SYNE4Q8N205 404 aa8.46□□□□□ -1.05
COMMD3-215ENST00000602574 ZNF283Q8N7M2 679 aa8.46□□□□□ -1.05
COMMD3-215ENST00000602574 OR2D3Q8NGH3 330 aa8.46□□□□□ -1.05
COMMD3-215ENST00000602574 OR1N1Q8NGS0 311 aa8.46□□□□□ -1.05
COMMD3-215ENST00000602574 OR5R1Q8NH85 324 aa8.46□□□□□ -1.05
COMMD3-215ENST00000602574 SLC35C1Q96A29 364 aa8.46□□□□□ -1.05
COMMD3-215ENST00000602574 UPRTQ96BW1 309 aa8.46□□□□□ -1.05
COMMD3-215ENST00000602574 SENP8Q96LD8 212 aa8.46□□□□□ -1.05
COMMD3-215ENST00000602574 KCTD15Q96SI1 283 aaPredicted RBP8.46□□□□□ -1.05
COMMD3-215ENST00000602574 MBOAT4Q96T53 435 aa8.46□□□□□ -1.05
COMMD3-215ENST00000602574 PCDHB18PQ96TA0 734 aa8.46□□□□□ -1.05
COMMD3-215ENST00000602574 TMPRSS13Q9BYE2 586 aa8.46□□□□□ -1.05
COMMD3-215ENST00000602574 NSUN3Q9H649 340 aaKnown RBP8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms