RNA–Protein interactions for RNA: ENST00000600935.1

NUP62-222, Transcript of nucleoporin 62, human

TSL 4

Gene NUP62, Length 587 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-222	ENST00000600935	AGGF1	Q8N302	714 aa	eCLIP	10.06	□□□□□ -0.8
NUP62-222	ENST00000600935	SLC22A8	Q8TCC7	542 aa		10.06	□□□□□ -0.8
NUP62-222	ENST00000600935	ZNF669	Q96BR6	464 aa	Predicted RBP	10.06	□□□□□ -0.8
NUP62-222	ENST00000600935	INTS12	Q96CB8	462 aa	Known RBP	10.06	□□□□□ -0.8
NUP62-222	ENST00000600935	LINGO1	Q96FE5	620 aa		10.06	□□□□□ -0.8
NUP62-222	ENST00000600935	ZFP3	Q96NJ6	502 aa		10.06	□□□□□ -0.8
NUP62-222	ENST00000600935	UCN2	Q96RP3	112 aa		10.06	□□□□□ -0.8
NUP62-222	ENST00000600935	COPS7A	Q9UBW8	275 aa		10.06	□□□□□ -0.8
NUP62-222	ENST00000600935	FBXO5	Q9UKT4	447 aa		10.06	□□□□□ -0.8
NUP62-222	ENST00000600935	C15orf41	Q9Y2V0	281 aa		10.06	□□□□□ -0.8
NUP62-222	ENST00000600935	PRR14L	Q5THK1	2151 aa		10.06	□□□□□ -0.8
NUP62-222	ENST00000600935	TG	P01266	2768 aa		10.05	□□□□□ -0.8
NUP62-222	ENST00000600935	SNPH	O15079	494 aa		10.05	□□□□□ -0.8
NUP62-222	ENST00000600935	CD5L	O43866	347 aa		10.05	□□□□□ -0.8
NUP62-222	ENST00000600935	GUCA1C	O95843	209 aa		10.05	□□□□□ -0.8
NUP62-222	ENST00000600935	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	10.05	□□□□□ -0.8
NUP62-222	ENST00000600935	TNNI3	P19429	210 aa		10.05	□□□□□ -0.8
NUP62-222	ENST00000600935	HIST1H2AD	P20671	130 aa		10.05	□□□□□ -0.8
NUP62-222	ENST00000600935	GABRB3	P28472	473 aa		10.05	□□□□□ -0.8
NUP62-222	ENST00000600935	CPOX	P36551	454 aa		10.05	□□□□□ -0.8
NUP62-222	ENST00000600935	PCYT1A	P49585	367 aa		10.05	□□□□□ -0.8
NUP62-222	ENST00000600935	RGS4	P49798	205 aa		10.05	□□□□□ -0.8
NUP62-222	ENST00000600935	IGLV3-21	P80748	117 aa	Predicted RBP	10.05	□□□□□ -0.8
NUP62-222	ENST00000600935	CDK16	Q00536	496 aa		10.05	□□□□□ -0.8
NUP62-222	ENST00000600935	THOC5	Q13769	683 aa	Known RBP	10.05	□□□□□ -0.8
NUP62-222	ENST00000600935	SERTAD2	Q14140	314 aa		10.05	□□□□□ -0.8
NUP62-222	ENST00000600935	EFTUD2	Q15029	972 aa	Known RBP eCLIP	10.05	□□□□□ -0.8	1e-16	■■■■■ 60.2
NUP62-222	ENST00000600935	PPP1R3A	Q16821	1122 aa		10.05	□□□□□ -0.8
NUP62-222	ENST00000600935	WIPI1	Q5MNZ9	446 aa	Predicted RBP	10.05	□□□□□ -0.8
NUP62-222	ENST00000600935	RBM20	Q5T481	1227 aa	Known RBP	10.05	□□□□□ -0.8
NUP62-222	ENST00000600935	ANKRD22	Q5VYY1	191 aa		10.05	□□□□□ -0.8
NUP62-222	ENST00000600935	ARMC3	Q5W041	872 aa		10.05	□□□□□ -0.8
NUP62-222	ENST00000600935	ADNP2	Q6IQ32	1131 aa		10.05	□□□□□ -0.8
NUP62-222	ENST00000600935	ABHD17C	Q6PCB6	329 aa		10.05	□□□□□ -0.8
NUP62-222	ENST00000600935	SBSN	Q6UWP8	590 aa		10.05	□□□□□ -0.8
NUP62-222	ENST00000600935	ZNF793	Q6ZN11	406 aa		10.05	□□□□□ -0.8
NUP62-222	ENST00000600935	KIAA1328	Q86T90	577 aa		10.05	□□□□□ -0.8
NUP62-222	ENST00000600935	THOC6	Q86W42	341 aa	Known RBP	10.05	□□□□□ -0.8
NUP62-222	ENST00000600935	PALM2	Q8IXS6	379 aa		10.05	□□□□□ -0.8
NUP62-222	ENST00000600935	DND1	Q8IYX4	353 aa	Known RBP	10.05	□□□□□ -0.8
NUP62-222	ENST00000600935	ZNF441	Q8N8Z8	693 aa		10.05	□□□□□ -0.8
NUP62-222	ENST00000600935	OR2L5	Q8NG80	312 aa		10.05	□□□□□ -0.8
NUP62-222	ENST00000600935	GABPB2	Q8TAK5	448 aa	Predicted RBP	10.05	□□□□□ -0.8
NUP62-222	ENST00000600935	ABTB1	Q969K4	478 aa	Predicted RBP	10.05	□□□□□ -0.8
NUP62-222	ENST00000600935	HIST1H2AH	Q96KK5	128 aa		10.05	□□□□□ -0.8
NUP62-222	ENST00000600935	RILP	Q96NA2	401 aa		10.05	□□□□□ -0.8
NUP62-222	ENST00000600935	SERINC2	Q96SA4	455 aa		10.05	□□□□□ -0.8
NUP62-222	ENST00000600935	HIST1H2AJ	Q99878	128 aa		10.05	□□□□□ -0.8
NUP62-222	ENST00000600935	H2AFJ	Q9BTM1	129 aa		10.05	□□□□□ -0.8
NUP62-222	ENST00000600935	TSGA10	Q9BZW7	698 aa		10.05	□□□□□ -0.8
NUP62-222	ENST00000600935	PIGM	Q9H3S5	423 aa		10.05	□□□□□ -0.8
NUP62-222	ENST00000600935	PRDM7	Q9NQW5	492 aa		10.05	□□□□□ -0.8
NUP62-222	ENST00000600935	CLCF1	Q9UBD9	225 aa		10.05	□□□□□ -0.8
NUP62-222	ENST00000600935	PACSIN3	Q9UKS6	424 aa		10.05	□□□□□ -0.8
NUP62-222	ENST00000600935	SLC22A14	Q9Y267	594 aa		10.05	□□□□□ -0.8
NUP62-222	ENST00000600935	EPN1	Q9Y6I3	576 aa	Predicted RBP	10.05	□□□□□ -0.8
NUP62-222	ENST00000600935	TLX2	O43763	284 aa	Predicted RBP	10.04	□□□□□ -0.8
NUP62-222	ENST00000600935	FGF17	O60258	216 aa		10.04	□□□□□ -0.8
NUP62-222	ENST00000600935	CLPS	P04118	112 aa		10.04	□□□□□ -0.8
NUP62-222	ENST00000600935	CYP4B1	P13584	511 aa		10.04	□□□□□ -0.8
NUP62-222	ENST00000600935	CPN1	P15169	458 aa		10.04	□□□□□ -0.8
NUP62-222	ENST00000600935	SERPINB3	P29508	390 aa		10.04	□□□□□ -0.8
NUP62-222	ENST00000600935	MAGEA6	P43360	314 aa		10.04	□□□□□ -0.8
NUP62-222	ENST00000600935	MTTP	P55157	894 aa		10.04	□□□□□ -0.8
NUP62-222	ENST00000600935	RCAN2	Q14206	197 aa		10.04	□□□□□ -0.8
NUP62-222	ENST00000600935	EBP	Q15125	230 aa	Known RBP	10.04	□□□□□ -0.8
NUP62-222	ENST00000600935	TBCEL	Q5QJ74	424 aa		10.04	□□□□□ -0.8
NUP62-222	ENST00000600935	CASC4	Q6P4E1	433 aa		10.04	□□□□□ -0.8
NUP62-222	ENST00000600935	ZNF474	Q6S9Z5	364 aa	Predicted RBP	10.04	□□□□□ -0.8
NUP62-222	ENST00000600935	TMIGD1	Q6UXZ0	262 aa		10.04	□□□□□ -0.8
NUP62-222	ENST00000600935	TMEM64	Q6YI46	380 aa		10.04	□□□□□ -0.8
NUP62-222	ENST00000600935	SLCO4C1	Q6ZQN7	724 aa		10.04	□□□□□ -0.8
NUP62-222	ENST00000600935	PLEKHM3	Q6ZWE6	761 aa		10.04	□□□□□ -0.8
NUP62-222	ENST00000600935	UBE3D	Q7Z6J8	389 aa		10.04	□□□□□ -0.8
NUP62-222	ENST00000600935	DOK4	Q8TEW6	326 aa		10.04	□□□□□ -0.8
NUP62-222	ENST00000600935	ATL1	Q8WXF7	558 aa		10.04	□□□□□ -0.8
NUP62-222	ENST00000600935	DIO2	Q92813	273 aa		10.04	□□□□□ -0.8
NUP62-222	ENST00000600935	FBXL20	Q96IG2	436 aa		10.04	□□□□□ -0.8
NUP62-222	ENST00000600935	MAPKAP1	Q9BPZ7	522 aa		10.04	□□□□□ -0.8
NUP62-222	ENST00000600935	ANGPTL4	Q9BY76	406 aa		10.04	□□□□□ -0.8
NUP62-222	ENST00000600935	REXO4	Q9GZR2	422 aa	Known RBP	10.04	□□□□□ -0.8
NUP62-222	ENST00000600935	WWTR1	Q9GZV5	400 aa		10.04	□□□□□ -0.8
NUP62-222	ENST00000600935	ZNF226	Q9NYT6	803 aa		10.04	□□□□□ -0.8
NUP62-222	ENST00000600935	FETUB	Q9UGM5	382 aa		10.04	□□□□□ -0.8
NUP62-222	ENST00000600935	DTX4	Q9Y2E6	619 aa		10.04	□□□□□ -0.8
NUP62-222	ENST00000600935	DYRK1B	Q9Y463	629 aa		10.04	□□□□□ -0.8
NUP62-222	ENST00000600935		A0A088AWK7	358 aa		10.03	□□□□□ -0.8
NUP62-222	ENST00000600935		A0A1W2PNV4	684 aa		10.03	□□□□□ -0.8
NUP62-222	ENST00000600935	MSTN	O14793	375 aa		10.03	□□□□□ -0.8
NUP62-222	ENST00000600935	PRAMEF4	O60810	478 aa		10.03	□□□□□ -0.8
NUP62-222	ENST00000600935	CLEC3A	O75596	197 aa		10.03	□□□□□ -0.8
NUP62-222	ENST00000600935	ZNF10	P21506	573 aa	Predicted RBP	10.03	□□□□□ -0.8
NUP62-222	ENST00000600935	PTPN6	P29350	595 aa		10.03	□□□□□ -0.8
NUP62-222	ENST00000600935	MSH2	P43246	934 aa		10.03	□□□□□ -0.8
NUP62-222	ENST00000600935	STT3A	P46977	705 aa		10.03	□□□□□ -0.8
NUP62-222	ENST00000600935	ATP5J2	P56134	94 aa		10.03	□□□□□ -0.8
NUP62-222	ENST00000600935	FBXW4	P57775	412 aa		10.03	□□□□□ -0.8
NUP62-222	ENST00000600935	SLBP	Q14493	270 aa	Known RBP eCLIP	10.03	□□□□□ -0.8
NUP62-222	ENST00000600935	PRAMEF9	Q5VWM5	478 aa		10.03	□□□□□ -0.8
NUP62-222	ENST00000600935	DRICH1	Q6PGQ1	229 aa	Predicted RBP	10.03	□□□□□ -0.8

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