RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 SNX8Q9Y5X2 465 aa18.92■□□□□ 0.62
PNKP-214ENST00000600573 SPAG17Q6Q759 2223 aa18.92■□□□□ 0.62
PNKP-214ENST00000600573 TDRD6O60522 2096 aaKnown RBP18.92■□□□□ 0.62
PNKP-214ENST00000600573 UPK1AO00322 258 aa18.92■□□□□ 0.62
PNKP-214ENST00000600573 PGRMC2O15173 223 aa18.92■□□□□ 0.62
PNKP-214ENST00000600573 PRAMEF10O60809 474 aa18.92■□□□□ 0.62
PNKP-214ENST00000600573 TNFRSF21O75509 655 aa18.92■□□□□ 0.62
PNKP-214ENST00000600573 SMNDC1O75940 238 aaKnown RBP eCLIP18.92■□□□□ 0.62
PNKP-214ENST00000600573 C9P02748 559 aa18.92■□□□□ 0.62
PNKP-214ENST00000600573 GPC1P35052 558 aa18.92■□□□□ 0.62
PNKP-214ENST00000600573 MLLT3P42568 568 aaPredicted RBP18.92■□□□□ 0.62
PNKP-214ENST00000600573 MAGEA2P43356 314 aa18.92■□□□□ 0.62
PNKP-214ENST00000600573 NCBP2P52298 156 aaKnown RBP eCLIP18.92■□□□□ 0.622e-9■■■■□ 25.4
PNKP-214ENST00000600573 FAM53BQ14153 422 aa18.92■□□□□ 0.62
PNKP-214ENST00000600573 NR0B2Q15466 257 aa18.92■□□□□ 0.62
PNKP-214ENST00000600573 SPDYE7PQ495Y7 208 aa18.92■□□□□ 0.62
PNKP-214ENST00000600573 NHSL2Q5HYW2 709 aa18.92■□□□□ 0.62
PNKP-214ENST00000600573 C18orf63Q68DL7 685 aa18.92■□□□□ 0.62
PNKP-214ENST00000600573 CBLL1Q75N03 491 aa18.92■□□□□ 0.62
PNKP-214ENST00000600573 ST13P4Q8IZP2 240 aaPredicted RBP18.92■□□□□ 0.62
PNKP-214ENST00000600573 METTL25Q8N6Q8 603 aa18.92■□□□□ 0.62
PNKP-214ENST00000600573 ADAMTS18Q8TE60 1221 aa18.92■□□□□ 0.62
PNKP-214ENST00000600573 TANKQ92844 425 aa18.92■□□□□ 0.62
PNKP-214ENST00000600573 ASPSCR1Q9BZE9 553 aa18.92■□□□□ 0.62
PNKP-214ENST00000600573 SLC6A14Q9UN76 642 aa18.92■□□□□ 0.62
PNKP-214ENST00000600573 ZNF451Q9Y4E5 1061 aa18.92■□□□□ 0.62
PNKP-214ENST00000600573 CACNA1IQ9P0X4 2223 aa18.91■□□□□ 0.62
PNKP-214ENST00000600573 GNGT2O14610 69 aa18.91■□□□□ 0.62
PNKP-214ENST00000600573 TOX3O15405 576 aaPredicted RBP18.91■□□□□ 0.62
PNKP-214ENST00000600573 ERAL1O75616 437 aaKnown RBP18.91■□□□□ 0.62
PNKP-214ENST00000600573 HPRP00739 348 aa18.91■□□□□ 0.62
PNKP-214ENST00000600573 NUDT7P0C024 238 aa18.91■□□□□ 0.62
PNKP-214ENST00000600573 ETFAP13804 333 aa18.91■□□□□ 0.62
PNKP-214ENST00000600573 CCT3P49368 545 aaKnown RBP18.91■□□□□ 0.62
PNKP-214ENST00000600573 RUNX2Q13950 521 aa18.91■□□□□ 0.62
PNKP-214ENST00000600573 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.91■□□□□ 0.62
PNKP-214ENST00000600573 CARM1Q86X55 608 aa18.91■□□□□ 0.62
PNKP-214ENST00000600573 APLFQ8IW19 511 aaPredicted RBP18.91■□□□□ 0.62
PNKP-214ENST00000600573 OR4K14Q8NGD5 310 aa18.91■□□□□ 0.62
PNKP-214ENST00000600573 OR5AK3PQ8NH89 298 aa18.91■□□□□ 0.62
PNKP-214ENST00000600573 ANKRD60Q9BZ19 345 aa18.91■□□□□ 0.62
PNKP-214ENST00000600573 SIRT3Q9NTG7 399 aaPredicted RBP18.91■□□□□ 0.62
PNKP-214ENST00000600573 GPATCH2Q9NW75 528 aa18.91■□□□□ 0.62
PNKP-214ENST00000600573 ADPRHL2Q9NX46 363 aa18.91■□□□□ 0.62
PNKP-214ENST00000600573 SMPD3Q9NY59 655 aaPredicted RBP18.91■□□□□ 0.62
PNKP-214ENST00000600573 UBAP1Q9NZ09 502 aa18.91■□□□□ 0.62
PNKP-214ENST00000600573 RAPGEFL1Q9UHV5 662 aa18.91■□□□□ 0.62
PNKP-214ENST00000600573 GON4LQ3T8J9 2241 aa18.9■□□□□ 0.62
PNKP-214ENST00000600573 SLITRK5O94991 958 aa18.9■□□□□ 0.62
PNKP-214ENST00000600573 CER1O95813 267 aa18.9■□□□□ 0.62
PNKP-214ENST00000600573 IFNA14P01570 189 aa18.9■□□□□ 0.62
PNKP-214ENST00000600573 SYPP08247 313 aa18.9■□□□□ 0.62
PNKP-214ENST00000600573 IFI6P09912 130 aa18.9■□□□□ 0.62
PNKP-214ENST00000600573 OR1D5P58170 312 aa18.9■□□□□ 0.62
PNKP-214ENST00000600573 HSPB3Q12988 150 aa18.9■□□□□ 0.62
PNKP-214ENST00000600573 DAG1Q14118 895 aa18.9■□□□□ 0.62
PNKP-214ENST00000600573 COX20Q5RI15 118 aa18.9■□□□□ 0.62
PNKP-214ENST00000600573 SLC23A3Q6PIS1 610 aa18.9■□□□□ 0.62
PNKP-214ENST00000600573 USP53Q70EK8 1073 aa18.9■□□□□ 0.62
PNKP-214ENST00000600573 C6orf120Q7Z4R8 191 aa18.9■□□□□ 0.62
PNKP-214ENST00000600573 RNF130Q86XS8 419 aa18.9■□□□□ 0.62
PNKP-214ENST00000600573 ZDHHC21Q8IVQ6 265 aa18.9■□□□□ 0.62
PNKP-214ENST00000600573 ARHGEF39Q8N4T4 335 aa18.9■□□□□ 0.62
PNKP-214ENST00000600573 ZBTB44Q8NCP5 570 aa18.9■□□□□ 0.62
PNKP-214ENST00000600573 ZNF681Q96N22 645 aa18.9■□□□□ 0.62
PNKP-214ENST00000600573 DPYSL5Q9BPU6 564 aa18.9■□□□□ 0.62
PNKP-214ENST00000600573 C3orf14Q9HBI5 128 aa18.9■□□□□ 0.62
PNKP-214ENST00000600573 CAPN10Q9HC96 672 aa18.9■□□□□ 0.62
PNKP-214ENST00000600573 SOHLH2Q9NX45 425 aa18.9■□□□□ 0.62
PNKP-214ENST00000600573 C5AR2Q9P296 337 aa18.9■□□□□ 0.62
PNKP-214ENST00000600573 NAALAD2Q9Y3Q0 740 aa18.9■□□□□ 0.62
PNKP-214ENST00000600573 MN1Q10571 1320 aaPredicted RBP18.9■□□□□ 0.62
PNKP-214ENST00000600573 MUC3AQ02505 3323 aa18.9■□□□□ 0.62
PNKP-214ENST00000600573 FITM1A5D6W6 292 aa18.89■□□□□ 0.62
PNKP-214ENST00000600573 A6NHS1 94 aa18.89■□□□□ 0.62
PNKP-214ENST00000600573 DLGAP1O14490 977 aa18.89■□□□□ 0.62
PNKP-214ENST00000600573 SH3BP5O60239 455 aa18.89■□□□□ 0.62
PNKP-214ENST00000600573 TNFAIP8O95379 198 aa18.89■□□□□ 0.62
PNKP-214ENST00000600573 SEMG1P04279 462 aa18.89■□□□□ 0.62
PNKP-214ENST00000600573 MSL3P1P0C860 447 aa18.89■□□□□ 0.62
PNKP-214ENST00000600573 GABRA4P48169 554 aa18.89■□□□□ 0.62
PNKP-214ENST00000600573 ARL4DP49703 201 aa18.89■□□□□ 0.62
PNKP-214ENST00000600573 HSD11B2P80365 405 aa18.89■□□□□ 0.62
PNKP-214ENST00000600573 PRR5P85299 388 aa18.89■□□□□ 0.62
PNKP-214ENST00000600573 C16orf72Q14CZ0 275 aa18.89■□□□□ 0.62
PNKP-214ENST00000600573 INAVAQ3KP66 663 aa18.89■□□□□ 0.62
PNKP-214ENST00000600573 CCDC80Q76M96 950 aa18.89■□□□□ 0.62
PNKP-214ENST00000600573 PRSS42Q7Z5A4 293 aa18.89■□□□□ 0.62
PNKP-214ENST00000600573 ZDHHC13Q8IUH4 622 aa18.89■□□□□ 0.62
PNKP-214ENST00000600573 OR56A1Q8NGH5 318 aa18.89■□□□□ 0.62
PNKP-214ENST00000600573 KLHL6Q8WZ60 621 aa18.89■□□□□ 0.62
PNKP-214ENST00000600573 TFAP2CQ92754 450 aa18.89■□□□□ 0.62
PNKP-214ENST00000600573 CNRIP1Q96F85 164 aaPredicted RBP18.89■□□□□ 0.62
PNKP-214ENST00000600573 HSH2DQ96JZ2 352 aa18.89■□□□□ 0.62
PNKP-214ENST00000600573 C10orf90Q96M02 699 aa18.89■□□□□ 0.62
PNKP-214ENST00000600573 ADI1Q9BV57 179 aa18.89■□□□□ 0.62
PNKP-214ENST00000600573 ANGPT4Q9Y264 503 aa18.89■□□□□ 0.62
PNKP-214ENST00000600573 MAP4K5Q9Y4K4 846 aa18.89■□□□□ 0.62
PNKP-214ENST00000600573 B4GAT1O43505 415 aa18.89■□□□□ 0.61
PNKP-214ENST00000600573 CFIP05156 583 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms