RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 NKX2-8O15522 239 aa17.67■□□□□ 0.42
CCDC9-205ENST00000600117 FGF17O60258 216 aa17.67■□□□□ 0.42
CCDC9-205ENST00000600117 PRMT3O60678 531 aa17.67■□□□□ 0.42
CCDC9-205ENST00000600117 CTNSO60931 367 aa17.67■□□□□ 0.42
CCDC9-205ENST00000600117 ALOX12BO75342 701 aa17.67■□□□□ 0.42
CCDC9-205ENST00000600117 FURINP09958 794 aa17.67■□□□□ 0.42
CCDC9-205ENST00000600117 ALDOCP09972 364 aaKnown RBP17.67■□□□□ 0.42
CCDC9-205ENST00000600117 PRPS2P11908 318 aa17.67■□□□□ 0.42
CCDC9-205ENST00000600117 MAPK1P28482 360 aa17.67■□□□□ 0.42
CCDC9-205ENST00000600117 TLX1P31314 330 aaPredicted RBP17.67■□□□□ 0.42
CCDC9-205ENST00000600117 LSP1P33241 339 aa17.67■□□□□ 0.42
CCDC9-205ENST00000600117 POLE2P56282 527 aa17.67■□□□□ 0.42
CCDC9-205ENST00000600117 MC1RQ01726 317 aa17.67■□□□□ 0.42
CCDC9-205ENST00000600117 MAD2L1Q13257 205 aaPredicted RBP17.67■□□□□ 0.42
CCDC9-205ENST00000600117 UGT8Q16880 541 aa17.67■□□□□ 0.42
CCDC9-205ENST00000600117 CRTC2Q53ET0 693 aaPredicted RBP17.67■□□□□ 0.42
CCDC9-205ENST00000600117 OR52E8Q6IFG1 317 aa17.67■□□□□ 0.42
CCDC9-205ENST00000600117 LANCL3Q6ZV70 420 aa17.67■□□□□ 0.42
CCDC9-205ENST00000600117 LIX1Q8N485 282 aa17.67■□□□□ 0.42
CCDC9-205ENST00000600117 DNAJB14Q8TBM8 379 aa17.67■□□□□ 0.42
CCDC9-205ENST00000600117 TANKQ92844 425 aa17.67■□□□□ 0.42
CCDC9-205ENST00000600117 PTCHD1Q96NR3 888 aa17.67■□□□□ 0.42
CCDC9-205ENST00000600117 TSSK3Q96PN8 268 aa17.67■□□□□ 0.42
CCDC9-205ENST00000600117 FAIM2Q9BWQ8 316 aa17.67■□□□□ 0.42
CCDC9-205ENST00000600117 WDR41Q9HAD4 459 aa17.67■□□□□ 0.42
CCDC9-205ENST00000600117 NOP53Q9NZM5 478 aaKnown RBP17.67■□□□□ 0.42
CCDC9-205ENST00000600117 BAIAP2L1Q9UHR4 511 aa17.67■□□□□ 0.42
CCDC9-205ENST00000600117 WBP11Q9Y2W2 641 aaKnown RBP17.67■□□□□ 0.42
CCDC9-205ENST00000600117 HS3ST3B1Q9Y662 390 aa17.67■□□□□ 0.42
CCDC9-205ENST00000600117 LOC102723996A0A087X1L8 192 aa17.66■□□□□ 0.42
CCDC9-205ENST00000600117 ZNF891A8MT65 544 aaPredicted RBP17.66■□□□□ 0.42
CCDC9-205ENST00000600117 SOCS6O14544 535 aa17.66■□□□□ 0.42
CCDC9-205ENST00000600117 LDB3O75112 727 aa17.66■□□□□ 0.42
CCDC9-205ENST00000600117 IGHEP01854 428 aa17.66■□□□□ 0.42
CCDC9-205ENST00000600117 G6PDP11413 515 aa17.66■□□□□ 0.42
CCDC9-205ENST00000600117 DRD2P14416 443 aa17.66■□□□□ 0.42
CCDC9-205ENST00000600117 OTX2P32243 289 aa17.66■□□□□ 0.42
CCDC9-205ENST00000600117 DIO3P55073 304 aa17.66■□□□□ 0.42
CCDC9-205ENST00000600117 IGLV3-21P80748 117 aaPredicted RBP17.66■□□□□ 0.42
CCDC9-205ENST00000600117 LSM12Q3MHD2 195 aaKnown RBP17.66■□□□□ 0.42
CCDC9-205ENST00000600117 ATP1A1-AS1Q5TC04 95 aa17.66■□□□□ 0.42
CCDC9-205ENST00000600117 FAAH2Q6GMR7 532 aa17.66■□□□□ 0.42
CCDC9-205ENST00000600117 SLC48A1Q6P1K1 146 aa17.66■□□□□ 0.42
CCDC9-205ENST00000600117 IKBIPQ70UQ0 350 aa17.66■□□□□ 0.42
CCDC9-205ENST00000600117 SPATA19Q7Z5L4 167 aa17.66■□□□□ 0.42
CCDC9-205ENST00000600117 PARP9Q8IXQ6 854 aa17.66■□□□□ 0.42
CCDC9-205ENST00000600117 CEP70Q8NHQ1 597 aa17.66■□□□□ 0.42
CCDC9-205ENST00000600117 CLHC1Q8NHS4 586 aa17.66■□□□□ 0.42
CCDC9-205ENST00000600117 CDC26Q8NHZ8 85 aa17.66■□□□□ 0.42
CCDC9-205ENST00000600117 CHMP6Q96FZ7 201 aa17.66■□□□□ 0.42
CCDC9-205ENST00000600117 SIKE1Q9BRV8 207 aa17.66■□□□□ 0.42
CCDC9-205ENST00000600117 TRIM55Q9BYV6 548 aa17.66■□□□□ 0.42
CCDC9-205ENST00000600117 TCF7L2Q9NQB0 619 aa17.66■□□□□ 0.42
CCDC9-205ENST00000600117 C5AR2Q9P296 337 aa17.66■□□□□ 0.42
CCDC9-205ENST00000600117 EIF3LQ9Y262 564 aaKnown RBP17.66■□□□□ 0.42
CCDC9-205ENST00000600117 ABCA12Q86UK0 2595 aa17.65■□□□□ 0.42
CCDC9-205ENST00000600117 A0A1W2PQ72 361 aa17.65■□□□□ 0.42
CCDC9-205ENST00000600117 TCRBV16S1A1N1A0A5B0 115 aa17.65■□□□□ 0.42
CCDC9-205ENST00000600117 C8orf89P0DMQ9 161 aa17.65■□□□□ 0.42
CCDC9-205ENST00000600117 DDCP20711 480 aa17.65■□□□□ 0.42
CCDC9-205ENST00000600117 ASMTP46597 345 aa17.65■□□□□ 0.42
CCDC9-205ENST00000600117 SEC24CP53992 1094 aa17.65■□□□□ 0.42
CCDC9-205ENST00000600117 GNGT1P63211 74 aa17.65■□□□□ 0.42
CCDC9-205ENST00000600117 ID2Q02363 134 aa17.65■□□□□ 0.42
CCDC9-205ENST00000600117 FOLH1Q04609 750 aa17.65■□□□□ 0.42
CCDC9-205ENST00000600117 C2orf80Q0P641 193 aa17.65■□□□□ 0.42
CCDC9-205ENST00000600117 SLC13A2Q13183 592 aa17.65■□□□□ 0.42
CCDC9-205ENST00000600117 PTGR1Q14914 329 aa17.65■□□□□ 0.42
CCDC9-205ENST00000600117 HEPACAMQ14CZ8 416 aa17.65■□□□□ 0.42
CCDC9-205ENST00000600117 NSDHLQ15738 373 aa17.65■□□□□ 0.42
CCDC9-205ENST00000600117 TMEM198Q66K66 360 aa17.65■□□□□ 0.42
CCDC9-205ENST00000600117 NXNQ6DKJ4 435 aa17.65■□□□□ 0.42
CCDC9-205ENST00000600117 KIRREL2Q6UWL6 708 aa17.65■□□□□ 0.42
CCDC9-205ENST00000600117 ACAD11Q709F0 780 aa17.65■□□□□ 0.42
CCDC9-205ENST00000600117 ANKRD37Q7Z713 158 aa17.65■□□□□ 0.42
CCDC9-205ENST00000600117 MRGPREQ86SM8 312 aa17.65■□□□□ 0.42
CCDC9-205ENST00000600117 RAB43Q86YS6 212 aa17.65■□□□□ 0.42
CCDC9-205ENST00000600117 OR4N5Q8IXE1 308 aa17.65■□□□□ 0.42
CCDC9-205ENST00000600117 TMEM132CQ8N3T6 1108 aa17.65■□□□□ 0.42
CCDC9-205ENST00000600117 NACC2Q96BF6 587 aa17.65■□□□□ 0.42
CCDC9-205ENST00000600117 CCDC28BQ9BUN5 200 aa17.65■□□□□ 0.42
CCDC9-205ENST00000600117 AIG1Q9NVV5 245 aa17.65■□□□□ 0.42
CCDC9-205ENST00000600117 DCTN4Q9UJW0 460 aa17.65■□□□□ 0.42
CCDC9-205ENST00000600117 CACNA1DQ01668 2161 aa17.64■□□□□ 0.42
CCDC9-205ENST00000600117 A0A1W2PS29 197 aa17.64■□□□□ 0.41
CCDC9-205ENST00000600117 CDC14CA4D256 554 aa17.64■□□□□ 0.41
CCDC9-205ENST00000600117 PCDH17O14917 1159 aa17.64■□□□□ 0.41
CCDC9-205ENST00000600117 GPR75O95800 540 aa17.64■□□□□ 0.41
CCDC9-205ENST00000600117 TROVE2P10155 538 aaKnown RBP eCLIP17.64■□□□□ 0.41
CCDC9-205ENST00000600117 ALDH9A1P49189 494 aa17.64■□□□□ 0.41
CCDC9-205ENST00000600117 CDC20Q12834 499 aa17.64■□□□□ 0.41
CCDC9-205ENST00000600117 PDE7AQ13946 482 aa17.64■□□□□ 0.41
CCDC9-205ENST00000600117 PRSS53Q2L4Q9 553 aa17.64■□□□□ 0.41
CCDC9-205ENST00000600117 C8orf44Q96CB5 159 aa17.64■□□□□ 0.41
CCDC9-205ENST00000600117 EHD3Q9NZN3 535 aa17.64■□□□□ 0.41
CCDC9-205ENST00000600117 MYOCOSA0A1B0GUC4 107 aa17.63■□□□□ 0.41
CCDC9-205ENST00000600117 ANKRD28O15084 1053 aa17.63■□□□□ 0.41
CCDC9-205ENST00000600117 AKAP10O43572 662 aa17.63■□□□□ 0.41
CCDC9-205ENST00000600117 TBX19O60806 448 aa17.63■□□□□ 0.41
CCDC9-205ENST00000600117 LRATO95237 230 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms