RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 RPS19BP1Q86WX3 136 aaKnown RBP14.17□□□□□ -0.14
LIG1-219ENST00000600055 MORN4Q8NDC4 146 aa14.17□□□□□ -0.14
LIG1-219ENST00000600055 OR4K14Q8NGD5 310 aa14.17□□□□□ -0.14
LIG1-219ENST00000600055 OR1N1Q8NGS0 311 aa14.17□□□□□ -0.14
LIG1-219ENST00000600055 OR2T11Q8NH01 316 aa14.17□□□□□ -0.14
LIG1-219ENST00000600055 OR14A16Q8NHC5 309 aa14.17□□□□□ -0.14
LIG1-219ENST00000600055 PPP1R14CQ8TAE6 165 aa14.17□□□□□ -0.14
LIG1-219ENST00000600055 SLC2A12Q8TD20 617 aa14.17□□□□□ -0.14
LIG1-219ENST00000600055 C16orf78Q8WTQ4 265 aa14.17□□□□□ -0.14
LIG1-219ENST00000600055 TLCD1Q96CP7 247 aa14.17□□□□□ -0.14
LIG1-219ENST00000600055 RBM18Q96H35 190 aaKnown RBP14.17□□□□□ -0.14
LIG1-219ENST00000600055 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.17□□□□□ -0.14
LIG1-219ENST00000600055 EML4Q9HC35 981 aaKnown RBP14.17□□□□□ -0.14
LIG1-219ENST00000600055 ANKRD10Q9NXR5 420 aa14.17□□□□□ -0.14
LIG1-219ENST00000600055 HEY2Q9UBP5 337 aa14.17□□□□□ -0.14
LIG1-219ENST00000600055 ZDHHC2Q9UIJ5 367 aa14.17□□□□□ -0.14
LIG1-219ENST00000600055 CES1P1Q9UKY3 287 aa14.17□□□□□ -0.14
LIG1-219ENST00000600055 DLGAP4Q9Y2H0 992 aa14.17□□□□□ -0.14
LIG1-219ENST00000600055 PCDHGA10Q9Y5H3 936 aa14.17□□□□□ -0.14
LIG1-219ENST00000600055 DNAJC15Q9Y5T4 150 aa14.17□□□□□ -0.14
LIG1-219ENST00000600055 GNG14A0A1W2PPG7 69 aa14.16□□□□□ -0.14
LIG1-219ENST00000600055 TMEM120BA0PK00 339 aa14.16□□□□□ -0.14
LIG1-219ENST00000600055 GOLGA6L10A6NI86 522 aa14.16□□□□□ -0.14
LIG1-219ENST00000600055 GABRR3A8MPY1 467 aa14.16□□□□□ -0.14
LIG1-219ENST00000600055 BIRC5O15392 142 aa14.16□□□□□ -0.14
LIG1-219ENST00000600055 OR10H2O60403 315 aa14.16□□□□□ -0.14
LIG1-219ENST00000600055 GUCY1B2O75343 617 aa14.16□□□□□ -0.14
LIG1-219ENST00000600055 RSL1D1O76021 490 aaKnown RBP14.16□□□□□ -0.14
LIG1-219ENST00000600055 FGF4P08620 206 aa14.16□□□□□ -0.14
LIG1-219ENST00000600055 IL3P08700 152 aa14.16□□□□□ -0.14
LIG1-219ENST00000600055 H2AFXP16104 143 aaPredicted RBP14.16□□□□□ -0.14
LIG1-219ENST00000600055 BGNP21810 368 aa14.16□□□□□ -0.14
LIG1-219ENST00000600055 PIK3R1P27986 724 aa14.16□□□□□ -0.14
LIG1-219ENST00000600055 ALDH9A1P49189 494 aa14.16□□□□□ -0.14
LIG1-219ENST00000600055 TNFSF10P50591 281 aa14.16□□□□□ -0.14
LIG1-219ENST00000600055 MLF1P58340 268 aa14.16□□□□□ -0.14
LIG1-219ENST00000600055 TRA2BP62995 288 aaKnown RBP14.16□□□□□ -0.14
LIG1-219ENST00000600055 TUBA3CQ13748 450 aa14.16□□□□□ -0.14
LIG1-219ENST00000600055 TLR1Q15399 786 aa14.16□□□□□ -0.14
LIG1-219ENST00000600055 INPP5JQ15735 1006 aaPredicted RBP14.16□□□□□ -0.14
LIG1-219ENST00000600055 ZNF468Q5VIY5 522 aaPredicted RBP14.16□□□□□ -0.14
LIG1-219ENST00000600055 FAM180BQ6P0A1 224 aa14.16□□□□□ -0.14
LIG1-219ENST00000600055 SLC48A1Q6P1K1 146 aa14.16□□□□□ -0.14
LIG1-219ENST00000600055 GALNT18Q6P9A2 607 aa14.16□□□□□ -0.14
LIG1-219ENST00000600055 TUBA3EQ6PEY2 450 aa14.16□□□□□ -0.14
LIG1-219ENST00000600055 Q6ZSR9 355 aa14.16□□□□□ -0.14
LIG1-219ENST00000600055 ST13P4Q8IZP2 240 aaPredicted RBP14.16□□□□□ -0.14
LIG1-219ENST00000600055 CLYBLQ8N0X4 340 aa14.16□□□□□ -0.14
LIG1-219ENST00000600055 CISD2Q8N5K1 135 aaKnown RBP14.16□□□□□ -0.14
LIG1-219ENST00000600055 ZNF721Q8TF20 911 aa14.16□□□□□ -0.14
LIG1-219ENST00000600055 TWIST2Q8WVJ9 160 aa14.16□□□□□ -0.14
LIG1-219ENST00000600055 ARL8AQ96BM9 186 aa14.16□□□□□ -0.14
LIG1-219ENST00000600055 C19orf60Q96EN9 201 aa14.16□□□□□ -0.14
LIG1-219ENST00000600055 SENP5Q96HI0 755 aaPredicted RBP14.16□□□□□ -0.14
LIG1-219ENST00000600055 PAIP2Q9BPZ3 127 aaKnown RBP14.16□□□□□ -0.14
LIG1-219ENST00000600055 RNF32Q9H0A6 362 aa14.16□□□□□ -0.14
LIG1-219ENST00000600055 STMN4Q9H169 189 aaPredicted RBP14.16□□□□□ -0.14
LIG1-219ENST00000600055 SIRT5Q9NXA8 310 aa14.16□□□□□ -0.14
LIG1-219ENST00000600055 POLR3HQ9Y535 204 aaPredicted RBP14.16□□□□□ -0.14
LIG1-219ENST00000600055 SPENQ96T58 3664 aaKnown RBP14.15□□□□□ -0.14
LIG1-219ENST00000600055 C1orf226A1L170 272 aa14.15□□□□□ -0.14
LIG1-219ENST00000600055 OR5H15A6NDH6 313 aa14.15□□□□□ -0.14
LIG1-219ENST00000600055 TMEM200CA6NKL6 621 aa14.15□□□□□ -0.14
LIG1-219ENST00000600055 SLC28A1O00337 649 aa14.15□□□□□ -0.14
LIG1-219ENST00000600055 PIP5K1BO14986 540 aa14.15□□□□□ -0.14
LIG1-219ENST00000600055 ERAL1O75616 437 aaKnown RBP14.15□□□□□ -0.14
LIG1-219ENST00000600055 ZFAND5O76080 213 aa14.15□□□□□ -0.14
LIG1-219ENST00000600055 SERPINE1P05121 402 aa14.15□□□□□ -0.14
LIG1-219ENST00000600055 ANXA4P09525 319 aaPredicted RBP14.15□□□□□ -0.14
LIG1-219ENST00000600055 SLC35E2P0CK97 266 aa14.15□□□□□ -0.14
LIG1-219ENST00000600055 COX7A2P14406 83 aa14.15□□□□□ -0.14
LIG1-219ENST00000600055 PTGER1P34995 402 aa14.15□□□□□ -0.14
LIG1-219ENST00000600055 SERPINB5P36952 375 aa14.15□□□□□ -0.14
LIG1-219ENST00000600055 CD96P40200 585 aa14.15□□□□□ -0.14
LIG1-219ENST00000600055 XKP51811 444 aa14.15□□□□□ -0.14
LIG1-219ENST00000600055 WDR4P57081 412 aaKnown RBP14.15□□□□□ -0.14
LIG1-219ENST00000600055 DUSP2Q05923 314 aa14.15□□□□□ -0.14
LIG1-219ENST00000600055 BIKQ13323 160 aa14.15□□□□□ -0.14
LIG1-219ENST00000600055 ZNF267Q14586 743 aaPredicted RBP14.15□□□□□ -0.14
LIG1-219ENST00000600055 DDIASQ8IXT1 998 aa14.15□□□□□ -0.14
LIG1-219ENST00000600055 CDC26Q8NHZ8 85 aa14.15□□□□□ -0.14
LIG1-219ENST00000600055 CPT1CQ8TCG5 803 aa14.15□□□□□ -0.14
LIG1-219ENST00000600055 MGARPQ8TDB4 240 aa14.15□□□□□ -0.14
LIG1-219ENST00000600055 SIGLEC12Q96PQ1 595 aa14.15□□□□□ -0.14
LIG1-219ENST00000600055 FAIM2Q9BWQ8 316 aa14.15□□□□□ -0.14
LIG1-219ENST00000600055 C20orf27Q9GZN8 174 aa14.15□□□□□ -0.14
LIG1-219ENST00000600055 LRTM1Q9HBL6 345 aa14.15□□□□□ -0.14
LIG1-219ENST00000600055 J3QKU1 62 aa14.14□□□□□ -0.15
LIG1-219ENST00000600055 RGS14O43566 566 aa14.14□□□□□ -0.15
LIG1-219ENST00000600055 SEC22BO75396 215 aa14.14□□□□□ -0.15
LIG1-219ENST00000600055 HSPA4LO95757 839 aa14.14□□□□□ -0.15
LIG1-219ENST00000600055 CHEK2O96017 543 aa14.14□□□□□ -0.15
LIG1-219ENST00000600055 CT62P0C5K7 136 aa14.14□□□□□ -0.15
LIG1-219ENST00000600055 FEN1P39748 380 aaKnown RBP14.14□□□□□ -0.15
LIG1-219ENST00000600055 ABCE1P61221 599 aaKnown RBP14.14□□□□□ -0.15
LIG1-219ENST00000600055 ERVK-8P63133 956 aa14.14□□□□□ -0.15
LIG1-219ENST00000600055 KIAA0040Q15053 153 aa14.14□□□□□ -0.15
LIG1-219ENST00000600055 NR6A1Q15406 480 aa14.14□□□□□ -0.15
LIG1-219ENST00000600055 HHATQ5VTY9 493 aa14.14□□□□□ -0.15
LIG1-219ENST00000600055 SPINK14Q6IE38 97 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms