RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, human

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-223	ENST00000599223	TGM3	Q08188	693 aa		13.54	□□□□□ -0.24
IRF3-223	ENST00000599223	SERTAD2	Q14140	314 aa		13.54	□□□□□ -0.24
IRF3-223	ENST00000599223	RCN2	Q14257	317 aa		13.54	□□□□□ -0.24
IRF3-223	ENST00000599223	SLMAP	Q14BN4	828 aa		13.54	□□□□□ -0.24
IRF3-223	ENST00000599223	HYAL4	Q2M3T9	481 aa		13.54	□□□□□ -0.24
IRF3-223	ENST00000599223	ZNF791	Q3KP31	576 aa	Predicted RBP	13.54	□□□□□ -0.24
IRF3-223	ENST00000599223	PAGE2B	Q5JRK9	111 aa		13.54	□□□□□ -0.24
IRF3-223	ENST00000599223	PRAMEF20	Q5VT98	475 aa		13.54	□□□□□ -0.24
IRF3-223	ENST00000599223	C18orf63	Q68DL7	685 aa		13.54	□□□□□ -0.24
IRF3-223	ENST00000599223	PAOX	Q6QHF9	649 aa		13.54	□□□□□ -0.24
IRF3-223	ENST00000599223	ACAD11	Q709F0	780 aa		13.54	□□□□□ -0.24
IRF3-223	ENST00000599223	TMEM200A	Q86VY9	491 aa		13.54	□□□□□ -0.24
IRF3-223	ENST00000599223	LAS2	Q8IYD9	372 aa		13.54	□□□□□ -0.24
IRF3-223	ENST00000599223	GOLGA6L1	Q8N7Z2	621 aa		13.54	□□□□□ -0.24
IRF3-223	ENST00000599223	PYROXD1	Q8WU10	500 aa		13.54	□□□□□ -0.24
IRF3-223	ENST00000599223	UBTD2	Q8WUN7	234 aa		13.54	□□□□□ -0.24
IRF3-223	ENST00000599223	PPWD1	Q96BP3	646 aa	Known RBP	13.54	□□□□□ -0.24
IRF3-223	ENST00000599223	ATOH8	Q96SQ7	321 aa		13.54	□□□□□ -0.24
IRF3-223	ENST00000599223	CPNE1	Q99829	537 aa		13.54	□□□□□ -0.24
IRF3-223	ENST00000599223	TBCD	Q9BTW9	1192 aa		13.54	□□□□□ -0.24
IRF3-223	ENST00000599223	CD244	Q9BZW8	370 aa		13.54	□□□□□ -0.24
IRF3-223	ENST00000599223	OR51B5	Q9H339	312 aa		13.54	□□□□□ -0.24
IRF3-223	ENST00000599223	PROK2	Q9HC23	129 aa		13.54	□□□□□ -0.24
IRF3-223	ENST00000599223	SACM1L	Q9NTJ5	587 aa		13.54	□□□□□ -0.24
IRF3-223	ENST00000599223	GRHL1	Q9NZI5	618 aa		13.54	□□□□□ -0.24
IRF3-223	ENST00000599223	RNF112	Q9ULX5	631 aa		13.54	□□□□□ -0.24
IRF3-223	ENST00000599223	L3MBTL1	Q9Y468	752 aa		13.54	□□□□□ -0.24
IRF3-223	ENST00000599223	MAP1A	P78559	2803 aa	Predicted RBP	13.54	□□□□□ -0.24
IRF3-223	ENST00000599223	SYNDIG1L	A6NDD5	238 aa		13.53	□□□□□ -0.24
IRF3-223	ENST00000599223	BCKDK	O14874	412 aa		13.53	□□□□□ -0.24
IRF3-223	ENST00000599223	RFPL3S	P0C7P2	107 aa		13.53	□□□□□ -0.24
IRF3-223	ENST00000599223	CPN2	P22792	545 aa		13.53	□□□□□ -0.24
IRF3-223	ENST00000599223	CASP2	P42575	452 aa		13.53	□□□□□ -0.24
IRF3-223	ENST00000599223	STT3A	P46977	705 aa		13.53	□□□□□ -0.24
IRF3-223	ENST00000599223	HNRNPH2	P55795	449 aa	Known RBP	13.53	□□□□□ -0.24
IRF3-223	ENST00000599223	TNFRSF17	Q02223	184 aa		13.53	□□□□□ -0.24
IRF3-223	ENST00000599223	FOLH1	Q04609	750 aa		13.53	□□□□□ -0.24
IRF3-223	ENST00000599223	LAPTM5	Q13571	262 aa		13.53	□□□□□ -0.24
IRF3-223	ENST00000599223	DDX39B	Q13838	428 aa	Known RBP	13.53	□□□□□ -0.24
IRF3-223	ENST00000599223	SNTB1	Q13884	538 aa	Known RBP	13.53	□□□□□ -0.24
IRF3-223	ENST00000599223	MPEG1	Q2M385	716 aa		13.53	□□□□□ -0.24
IRF3-223	ENST00000599223	TMEM35A	Q53FP2	167 aa		13.53	□□□□□ -0.24
IRF3-223	ENST00000599223	HSP90B2P	Q58FF3	399 aa		13.53	□□□□□ -0.24
IRF3-223	ENST00000599223	KHDRBS2	Q5VWX1	349 aa	Known RBP	13.53	□□□□□ -0.24
IRF3-223	ENST00000599223	MED27	Q6P2C8	311 aa		13.53	□□□□□ -0.24
IRF3-223	ENST00000599223	OPN5	Q6U736	354 aa		13.53	□□□□□ -0.24
IRF3-223	ENST00000599223	B3GNT6	Q6ZMB0	384 aa		13.53	□□□□□ -0.24
IRF3-223	ENST00000599223	ISCA2	Q86U28	154 aa		13.53	□□□□□ -0.24
IRF3-223	ENST00000599223	MREG	Q8N565	214 aa		13.53	□□□□□ -0.24
IRF3-223	ENST00000599223	OR7G3	Q8NG95	312 aa		13.53	□□□□□ -0.24
IRF3-223	ENST00000599223	NUBPL	Q8TB37	319 aa		13.53	□□□□□ -0.24
IRF3-223	ENST00000599223	SENP5	Q96HI0	755 aa	Predicted RBP	13.53	□□□□□ -0.24
IRF3-223	ENST00000599223	PKNOX2	Q96KN3	472 aa		13.53	□□□□□ -0.24
IRF3-223	ENST00000599223	SGCZ	Q96LD1	299 aa		13.53	□□□□□ -0.24
IRF3-223	ENST00000599223	ZNF559	Q9BR84	538 aa		13.53	□□□□□ -0.24
IRF3-223	ENST00000599223	ZNF717	Q9BY31	904 aa	Predicted RBP	13.53	□□□□□ -0.24
IRF3-223	ENST00000599223	SLC6A15	Q9H2J7	730 aa		13.53	□□□□□ -0.24
IRF3-223	ENST00000599223	IGSF5	Q9NSI5	407 aa		13.53	□□□□□ -0.24
IRF3-223	ENST00000599223	NUDT4	Q9NZJ9	180 aa		13.53	□□□□□ -0.24
IRF3-223	ENST00000599223	COPS7A	Q9UBW8	275 aa		13.53	□□□□□ -0.24
IRF3-223	ENST00000599223	KCNN3	Q9UGI6	736 aa		13.53	□□□□□ -0.24
IRF3-223	ENST00000599223	ACAN	P16112	2415 aa		13.53	□□□□□ -0.24
IRF3-223	ENST00000599223	VPS13C	Q709C8	3753 aa		13.52	□□□□□ -0.25
IRF3-223	ENST00000599223		A0A1W2PS29	197 aa		13.52	□□□□□ -0.25
IRF3-223	ENST00000599223	WASHC1	A8K0Z3	465 aa		13.52	□□□□□ -0.25
IRF3-223	ENST00000599223	FOXO6	A8MYZ6	492 aa		13.52	□□□□□ -0.25
IRF3-223	ENST00000599223	KDM4E	B2RXH2	506 aa	Predicted RBP	13.52	□□□□□ -0.25
IRF3-223	ENST00000599223	SUPT3H	B4E1H0	165 aa		13.52	□□□□□ -0.25
IRF3-223	ENST00000599223	PLPP1	O14494	284 aa		13.52	□□□□□ -0.25
IRF3-223	ENST00000599223	SUPT3H	O75486	399 aa		13.52	□□□□□ -0.25
IRF3-223	ENST00000599223	CLPS	P04118	112 aa		13.52	□□□□□ -0.25
IRF3-223	ENST00000599223		P04436	131 aa		13.52	□□□□□ -0.25
IRF3-223	ENST00000599223	MTHFD2	P13995	350 aa		13.52	□□□□□ -0.25
IRF3-223	ENST00000599223	DNAJA1	P31689	397 aa	Known RBP	13.52	□□□□□ -0.25
IRF3-223	ENST00000599223	ART1	P52961	327 aa		13.52	□□□□□ -0.25
IRF3-223	ENST00000599223	MYBPH	Q13203	477 aa		13.52	□□□□□ -0.25
IRF3-223	ENST00000599223	PIGG	Q5H8A4	983 aa		13.52	□□□□□ -0.25
IRF3-223	ENST00000599223	C1orf185	Q5T7R7	199 aa		13.52	□□□□□ -0.25
IRF3-223	ENST00000599223	SEM1	Q6ZVN7	128 aa		13.52	□□□□□ -0.25
IRF3-223	ENST00000599223	OR10G3	Q8NGC4	313 aa		13.52	□□□□□ -0.25
IRF3-223	ENST00000599223	OR5L2	Q8NGL0	311 aa		13.52	□□□□□ -0.25
IRF3-223	ENST00000599223	OR10Q1	Q8NGQ4	319 aa		13.52	□□□□□ -0.25
IRF3-223	ENST00000599223	HUS1B	Q8NHY5	278 aa		13.52	□□□□□ -0.25
IRF3-223	ENST00000599223	SPACA9	Q96E40	222 aa	Predicted RBP	13.52	□□□□□ -0.25
IRF3-223	ENST00000599223	FBXL20	Q96IG2	436 aa		13.52	□□□□□ -0.25
IRF3-223	ENST00000599223	DGAT2	Q96PD7	388 aa		13.52	□□□□□ -0.25
IRF3-223	ENST00000599223	FUT8	Q9BYC5	575 aa		13.52	□□□□□ -0.25
IRF3-223	ENST00000599223	PHACTR1	Q9C0D0	580 aa		13.52	□□□□□ -0.25
IRF3-223	ENST00000599223	ROGDI	Q9GZN7	287 aa		13.52	□□□□□ -0.25
IRF3-223	ENST00000599223	DMRT3	Q9NQL9	472 aa		13.52	□□□□□ -0.25
IRF3-223	ENST00000599223	ZNF446	Q9NWS9	450 aa		13.52	□□□□□ -0.25
IRF3-223	ENST00000599223	TXNDC16	Q9P2K2	825 aa		13.52	□□□□□ -0.25
IRF3-223	ENST00000599223	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	13.52	□□□□□ -0.25
IRF3-223	ENST00000599223	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	13.52	□□□□□ -0.25
IRF3-223	ENST00000599223	MED12	Q93074	2177 aa		13.52	□□□□□ -0.25
IRF3-223	ENST00000599223	LRRC14B	A6NHZ5	514 aa		13.51	□□□□□ -0.25
IRF3-223	ENST00000599223		K7EPI3	171 aa		13.51	□□□□□ -0.25
IRF3-223	ENST00000599223	TMPRSS11D	O60235	418 aa		13.51	□□□□□ -0.25
IRF3-223	ENST00000599223	SUSD5	O60279	629 aa		13.51	□□□□□ -0.25
IRF3-223	ENST00000599223	KERA	O60938	352 aa		13.51	□□□□□ -0.25

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