RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 THOC1Q96FV9 657 aaKnown RBP9.88□□□□□ -0.83
LIG1-210ENST00000596332 ZNF764Q96H86 408 aaPredicted RBP9.88□□□□□ -0.83
LIG1-210ENST00000596332 TSSK3Q96PN8 268 aa9.88□□□□□ -0.83
LIG1-210ENST00000596332 RIC8BQ9NVN3 520 aa9.88□□□□□ -0.83
LIG1-210ENST00000596332 ATP6V1HQ9UI12 483 aa9.88□□□□□ -0.83
LIG1-210ENST00000596332 ZNF639Q9UID6 485 aa9.88□□□□□ -0.83
LIG1-210ENST00000596332 WBP11Q9Y2W2 641 aaKnown RBP9.88□□□□□ -0.83
LIG1-210ENST00000596332 GNG14A0A1W2PPG7 69 aa9.87□□□□□ -0.83
LIG1-210ENST00000596332 BLACEA4D250 179 aa9.87□□□□□ -0.83
LIG1-210ENST00000596332 A8MUA0 341 aa9.87□□□□□ -0.83
LIG1-210ENST00000596332 CLDN4O14493 209 aa9.87□□□□□ -0.83
LIG1-210ENST00000596332 PCDH17O14917 1159 aa9.87□□□□□ -0.83
LIG1-210ENST00000596332 PRKNO60260 465 aaPredicted RBP9.87□□□□□ -0.83
LIG1-210ENST00000596332 SEC24DO94855 1032 aaPredicted RBP9.87□□□□□ -0.83
LIG1-210ENST00000596332 LRATO95237 230 aa9.87□□□□□ -0.83
LIG1-210ENST00000596332 HPP00738 406 aa9.87□□□□□ -0.83
LIG1-210ENST00000596332 PDGFAP04085 211 aa9.87□□□□□ -0.83
LIG1-210ENST00000596332 IGKV3-11P04433 115 aa9.87□□□□□ -0.83
LIG1-210ENST00000596332 SLC35E2P0CK97 266 aa9.87□□□□□ -0.83
LIG1-210ENST00000596332 CPMP14384 443 aa9.87□□□□□ -0.83
LIG1-210ENST00000596332 LBPP18428 481 aa9.87□□□□□ -0.83
LIG1-210ENST00000596332 GALNSP34059 522 aa9.87□□□□□ -0.83
LIG1-210ENST00000596332 BUD31P41223 144 aaPredicted RBP9.87□□□□□ -0.83
LIG1-210ENST00000596332 GSTM5P46439 218 aa9.87□□□□□ -0.83
LIG1-210ENST00000596332 STT3AP46977 705 aa9.87□□□□□ -0.83
LIG1-210ENST00000596332 XKP51811 444 aa9.87□□□□□ -0.83
LIG1-210ENST00000596332 SEC24CP53992 1094 aa9.87□□□□□ -0.83
LIG1-210ENST00000596332 AQP5P55064 265 aa9.87□□□□□ -0.83
LIG1-210ENST00000596332 WNT3P56703 355 aa9.87□□□□□ -0.83
LIG1-210ENST00000596332 CLDN8P56748 225 aa9.87□□□□□ -0.83
LIG1-210ENST00000596332 OR4D2P58180 307 aa9.87□□□□□ -0.83
LIG1-210ENST00000596332 SLC26A5P58743 744 aa9.87□□□□□ -0.83
LIG1-210ENST00000596332 SLC13A2Q13183 592 aa9.87□□□□□ -0.83
LIG1-210ENST00000596332 PRICKLE4Q2TBC4 344 aa9.87□□□□□ -0.83
LIG1-210ENST00000596332 BROXQ5VW32 411 aa9.87□□□□□ -0.83
LIG1-210ENST00000596332 OR52E8Q6IFG1 317 aa9.87□□□□□ -0.83
LIG1-210ENST00000596332 H3F3CQ6NXT2 135 aa9.87□□□□□ -0.83
LIG1-210ENST00000596332 PAPD4Q6PIY7 484 aaKnown RBP9.87□□□□□ -0.83
LIG1-210ENST00000596332 RAB43Q86YS6 212 aa9.87□□□□□ -0.83
LIG1-210ENST00000596332 TICAM1Q8IUC6 712 aa9.87□□□□□ -0.83
LIG1-210ENST00000596332 KIRREL3Q8IZU9 778 aa9.87□□□□□ -0.83
LIG1-210ENST00000596332 KIF2BQ8N4N8 673 aa9.87□□□□□ -0.83
LIG1-210ENST00000596332 EXD3Q8N9H8 876 aa9.87□□□□□ -0.83
LIG1-210ENST00000596332 FNDC5Q8NAU1 212 aa9.87□□□□□ -0.83
LIG1-210ENST00000596332 ZSCAN1Q8NBB4 408 aa9.87□□□□□ -0.83
LIG1-210ENST00000596332 OR4K14Q8NGD5 310 aa9.87□□□□□ -0.83
LIG1-210ENST00000596332 ELP5Q8TE02 316 aa9.87□□□□□ -0.83
LIG1-210ENST00000596332 ZNF721Q8TF20 911 aa9.87□□□□□ -0.83
LIG1-210ENST00000596332 EXTL1Q92935 676 aa9.87□□□□□ -0.83
LIG1-210ENST00000596332 GFM2Q969S9 779 aaKnown RBP9.87□□□□□ -0.83
LIG1-210ENST00000596332 COQ8BQ96D53 544 aa9.87□□□□□ -0.83
LIG1-210ENST00000596332 IP6K3Q96PC2 410 aa9.87□□□□□ -0.83
LIG1-210ENST00000596332 BRINP2Q9C0B6 783 aa9.87□□□□□ -0.83
LIG1-210ENST00000596332 SEMA4CQ9C0C4 833 aa9.87□□□□□ -0.83
LIG1-210ENST00000596332 ING2Q9H160 280 aa9.87□□□□□ -0.83
LIG1-210ENST00000596332 ZNF385DQ9H6B1 395 aa9.87□□□□□ -0.83
LIG1-210ENST00000596332 ZNF160Q9HCG1 818 aa9.87□□□□□ -0.83
LIG1-210ENST00000596332 SLC52A3Q9NQ40 469 aa9.87□□□□□ -0.83
LIG1-210ENST00000596332 FGFR1OP2Q9NVK5 253 aa9.87□□□□□ -0.83
LIG1-210ENST00000596332 AIG1Q9NVV5 245 aa9.87□□□□□ -0.83
LIG1-210ENST00000596332 WDR70Q9NW82 654 aa9.87□□□□□ -0.83
LIG1-210ENST00000596332 EHD3Q9NZN3 535 aa9.87□□□□□ -0.83
LIG1-210ENST00000596332 POLHQ9Y253 713 aa9.87□□□□□ -0.83
LIG1-210ENST00000596332 SAGE2PA6NJ88 616 aa9.86□□□□□ -0.83
LIG1-210ENST00000596332 ARGFXA6NJG6 315 aa9.86□□□□□ -0.83
LIG1-210ENST00000596332 TRPC5OSA6NMA1 111 aa9.86□□□□□ -0.83
LIG1-210ENST00000596332 AKAP10O43572 662 aa9.86□□□□□ -0.83
LIG1-210ENST00000596332 MAN1A2O60476 641 aa9.86□□□□□ -0.83
LIG1-210ENST00000596332 VPS4BO75351 444 aa9.86□□□□□ -0.83
LIG1-210ENST00000596332 ATP1B1P05026 303 aa9.86□□□□□ -0.83
LIG1-210ENST00000596332 ITGAMP11215 1152 aa9.86□□□□□ -0.83
LIG1-210ENST00000596332 LAMP1P11279 417 aa9.86□□□□□ -0.83
LIG1-210ENST00000596332 PRPS2P11908 318 aa9.86□□□□□ -0.83
LIG1-210ENST00000596332 TLX1P31314 330 aaPredicted RBP9.86□□□□□ -0.83
LIG1-210ENST00000596332 FEN1P39748 380 aaKnown RBP9.86□□□□□ -0.83
LIG1-210ENST00000596332 MRPL19P49406 292 aaKnown RBP9.86□□□□□ -0.83
LIG1-210ENST00000596332 UFM1P61960 85 aa9.86□□□□□ -0.83
LIG1-210ENST00000596332 TERF2Q15554 542 aa9.86□□□□□ -0.83
LIG1-210ENST00000596332 ELAVL1Q15717 326 aaKnown RBP9.86□□□□□ -0.83
LIG1-210ENST00000596332 SPRED3Q2MJR0 410 aa9.86□□□□□ -0.83
LIG1-210ENST00000596332 FHL5Q5TD97 284 aa9.86□□□□□ -0.83
LIG1-210ENST00000596332 MFSD4BQ5TF39 518 aa9.86□□□□□ -0.83
LIG1-210ENST00000596332 PLAG1Q6DJT9 500 aa9.86□□□□□ -0.83
LIG1-210ENST00000596332 FAM111BQ6SJ93 734 aa9.86□□□□□ -0.83
LIG1-210ENST00000596332 IGSF10Q6WRI0 2623 aa9.86□□□□□ -0.83
LIG1-210ENST00000596332 IKBIPQ70UQ0 350 aa9.86□□□□□ -0.83
LIG1-210ENST00000596332 GPR155Q7Z3F1 870 aa9.86□□□□□ -0.83
LIG1-210ENST00000596332 SPATA19Q7Z5L4 167 aa9.86□□□□□ -0.83
LIG1-210ENST00000596332 CAMKMTQ7Z624 323 aa9.86□□□□□ -0.83
LIG1-210ENST00000596332 FUNDC1Q8IVP5 155 aa9.86□□□□□ -0.83
LIG1-210ENST00000596332 PARP9Q8IXQ6 854 aa9.86□□□□□ -0.83
LIG1-210ENST00000596332 ST13P4Q8IZP2 240 aaPredicted RBP9.86□□□□□ -0.83
LIG1-210ENST00000596332 ARMC10Q8N2F6 343 aa9.86□□□□□ -0.83
LIG1-210ENST00000596332 TMEM102Q8N9M5 508 aaPredicted RBP9.86□□□□□ -0.83
LIG1-210ENST00000596332 OR7A2PQ8NGA2 310 aa9.86□□□□□ -0.83
LIG1-210ENST00000596332 CEP70Q8NHQ1 597 aa9.86□□□□□ -0.83
LIG1-210ENST00000596332 MARK4Q96L34 752 aa9.86□□□□□ -0.83
LIG1-210ENST00000596332 TUBB6Q9BUF5 446 aa9.86□□□□□ -0.83
LIG1-210ENST00000596332 CCDC28BQ9BUN5 200 aa9.86□□□□□ -0.83
LIG1-210ENST00000596332 NUDT9Q9BW91 350 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms