RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 CASP2P42575 452 aa9.15□□□□□ -0.94
LIG1-209ENST00000596104 DUSP8Q13202 625 aa9.15□□□□□ -0.94
LIG1-209ENST00000596104 MORF4L2Q15014 288 aa9.15□□□□□ -0.94
LIG1-209ENST00000596104 TBCCQ15814 346 aa9.15□□□□□ -0.94
LIG1-209ENST00000596104 PDK4Q16654 411 aa9.15□□□□□ -0.94
LIG1-209ENST00000596104 TMEM35AQ53FP2 167 aa9.15□□□□□ -0.94
LIG1-209ENST00000596104 CDKL4Q5MAI5 379 aa9.15□□□□□ -0.94
LIG1-209ENST00000596104 MAATS1Q7Z4T9 603 aa9.15□□□□□ -0.94
LIG1-209ENST00000596104 LACC1Q8IV20 430 aa9.15□□□□□ -0.94
LIG1-209ENST00000596104 DND1Q8IYX4 353 aaKnown RBP9.15□□□□□ -0.94
LIG1-209ENST00000596104 LIX1Q8N485 282 aa9.15□□□□□ -0.94
LIG1-209ENST00000596104 SPATA6LQ8N4H0 392 aa9.15□□□□□ -0.94
LIG1-209ENST00000596104 SNX31Q8N9S9 440 aa9.15□□□□□ -0.94
LIG1-209ENST00000596104 BBOF1Q8ND07 529 aa9.15□□□□□ -0.94
LIG1-209ENST00000596104 SRFBP1Q8NEF9 429 aaKnown RBP9.15□□□□□ -0.94
LIG1-209ENST00000596104 C7orf57Q8NEG2 295 aa9.15□□□□□ -0.94
LIG1-209ENST00000596104 DOK4Q8TEW6 326 aa9.15□□□□□ -0.94
LIG1-209ENST00000596104 PPWD1Q96BP3 646 aaKnown RBP9.15□□□□□ -0.94
LIG1-209ENST00000596104 LRRC46Q96FV0 321 aa9.15□□□□□ -0.94
LIG1-209ENST00000596104 C18orf12Q96KH6 178 aa9.15□□□□□ -0.94
LIG1-209ENST00000596104 DGAT2Q96PD7 388 aa9.15□□□□□ -0.94
LIG1-209ENST00000596104 OSBPL9Q96SU4 736 aa9.15□□□□□ -0.94
LIG1-209ENST00000596104 TIMP4Q99727 224 aa9.15□□□□□ -0.94
LIG1-209ENST00000596104 DOHHQ9BU89 302 aa9.15□□□□□ -0.94
LIG1-209ENST00000596104 PRDM14Q9GZV8 571 aa9.15□□□□□ -0.94
LIG1-209ENST00000596104 DDX47Q9H0S4 455 aaKnown RBP9.15□□□□□ -0.94
LIG1-209ENST00000596104 RHOJQ9H4E5 214 aa9.15□□□□□ -0.94
LIG1-209ENST00000596104 CNOT10Q9H9A5 744 aaKnown RBP9.15□□□□□ -0.94
LIG1-209ENST00000596104 RYDENQ9NUL5 291 aaKnown RBP9.15□□□□□ -0.94
LIG1-209ENST00000596104 MOCS1Q9NZB8 636 aa9.15□□□□□ -0.94
LIG1-209ENST00000596104 PTBP2Q9UKA9 531 aaKnown RBP9.15□□□□□ -0.94
LIG1-209ENST00000596104 PPP2R2CQ9Y2T4 447 aa9.15□□□□□ -0.94
LIG1-209ENST00000596104 SPACA6W5XKT8 324 aa9.15□□□□□ -0.94
LIG1-209ENST00000596104 C15orf38-AP3S2A0A0A6YYH1 394 aa9.14□□□□□ -0.95
LIG1-209ENST00000596104 A0A1W2PPR1 153 aa9.14□□□□□ -0.95
LIG1-209ENST00000596104 ANKRD33BA6NCL7 494 aa9.14□□□□□ -0.95
LIG1-209ENST00000596104 TUBAL3A6NHL2 446 aa9.14□□□□□ -0.95
LIG1-209ENST00000596104 TP73O15350 636 aa9.14□□□□□ -0.95
LIG1-209ENST00000596104 LRATO95237 230 aa9.14□□□□□ -0.95
LIG1-209ENST00000596104 TGFB1P01137 390 aa9.14□□□□□ -0.95
LIG1-209ENST00000596104 CLPSP04118 112 aa9.14□□□□□ -0.95
LIG1-209ENST00000596104 CPN2P22792 545 aa9.14□□□□□ -0.95
LIG1-209ENST00000596104 SERPINB3P29508 390 aa9.14□□□□□ -0.95
LIG1-209ENST00000596104 MSH2P43246 934 aa9.14□□□□□ -0.95
LIG1-209ENST00000596104 CDK9P50750 372 aaKnown RBP9.14□□□□□ -0.95
LIG1-209ENST00000596104 HERVK_113P63132 956 aa9.14□□□□□ -0.95
LIG1-209ENST00000596104 ERVK-8P63133 956 aa9.14□□□□□ -0.95
LIG1-209ENST00000596104 SORDQ00796 357 aa9.14□□□□□ -0.95
LIG1-209ENST00000596104 PLIN5Q00G26 463 aa9.14□□□□□ -0.95
LIG1-209ENST00000596104 IRF8Q02556 426 aa9.14□□□□□ -0.95
LIG1-209ENST00000596104 CHIT1Q13231 466 aa9.14□□□□□ -0.95
LIG1-209ENST00000596104 SLAMF1Q13291 335 aa9.14□□□□□ -0.95
LIG1-209ENST00000596104 LAPTM5Q13571 262 aa9.14□□□□□ -0.95
LIG1-209ENST00000596104 KEAP1Q14145 624 aa9.14□□□□□ -0.95
LIG1-209ENST00000596104 FASTKD3Q14CZ7 662 aaKnown RBP9.14□□□□□ -0.95
LIG1-209ENST00000596104 EBPQ15125 230 aaKnown RBP9.14□□□□□ -0.95
LIG1-209ENST00000596104 OR4D1Q15615 310 aa9.14□□□□□ -0.95
LIG1-209ENST00000596104 NTRK2Q16620 822 aa9.14□□□□□ -0.95
LIG1-209ENST00000596104 SPRED3Q2MJR0 410 aa9.14□□□□□ -0.95
LIG1-209ENST00000596104 PAGE2BQ5JRK9 111 aa9.14□□□□□ -0.95
LIG1-209ENST00000596104 FNDC7Q5VTL7 733 aa9.14□□□□□ -0.95
LIG1-209ENST00000596104 NSUN5P2Q63ZY6 315 aa9.14□□□□□ -0.95
LIG1-209ENST00000596104 SULT1C3Q6IMI6 304 aa9.14□□□□□ -0.95
LIG1-209ENST00000596104 Q71RC1 249 aaPredicted RBP9.14□□□□□ -0.95
LIG1-209ENST00000596104 GPSM1Q86YR5 675 aa9.14□□□□□ -0.95
LIG1-209ENST00000596104 ANKMY2Q8IV38 441 aa9.14□□□□□ -0.95
LIG1-209ENST00000596104 LRRC8AQ8IWT6 810 aa9.14□□□□□ -0.95
LIG1-209ENST00000596104 LAS2Q8IYD9 372 aa9.14□□□□□ -0.95
LIG1-209ENST00000596104 ZNF441Q8N8Z8 693 aa9.14□□□□□ -0.95
LIG1-209ENST00000596104 PDPRQ8NCN5 879 aa9.14□□□□□ -0.95
LIG1-209ENST00000596104 FAM13CQ8NE31 585 aa9.14□□□□□ -0.95
LIG1-209ENST00000596104 NTNG2Q96CW9 530 aa9.14□□□□□ -0.95
LIG1-209ENST00000596104 ARSGQ96EG1 525 aa9.14□□□□□ -0.95
LIG1-209ENST00000596104 VPS39Q96JC1 886 aa9.14□□□□□ -0.95
LIG1-209ENST00000596104 ART5Q96L15 291 aa9.14□□□□□ -0.95
LIG1-209ENST00000596104 ZNF597Q96LX8 424 aa9.14□□□□□ -0.95
LIG1-209ENST00000596104 JSRP1Q96MG2 331 aaPredicted RBP9.14□□□□□ -0.95
LIG1-209ENST00000596104 SORBS1Q9BX66 1292 aaKnown RBP9.14□□□□□ -0.95
LIG1-209ENST00000596104 ERVK-6Q9BXR3 956 aa9.14□□□□□ -0.95
LIG1-209ENST00000596104 WWTR1Q9GZV5 400 aa9.14□□□□□ -0.95
LIG1-209ENST00000596104 UBQLN3Q9H347 655 aa9.14□□□□□ -0.95
LIG1-209ENST00000596104 RPF2Q9H7B2 306 aaKnown RBP9.14□□□□□ -0.95
LIG1-209ENST00000596104 ERVK-19Q9WJR5 959 aa9.14□□□□□ -0.95
LIG1-209ENST00000596104 IKBKGQ9Y6K9 419 aa9.14□□□□□ -0.95
LIG1-209ENST00000596104 FBN3Q75N90 2809 aa9.14□□□□□ -0.95
LIG1-209ENST00000596104 FN1P02751 2386 aaKnown RBP9.14□□□□□ -0.95
LIG1-209ENST00000596104 NSD1Q96L73 2696 aaPredicted RBP9.13□□□□□ -0.95
LIG1-209ENST00000596104 MBD3L4A6NDZ8 208 aaPredicted RBP9.13□□□□□ -0.95
LIG1-209ENST00000596104 MBD3L3A6NE82 208 aaPredicted RBP9.13□□□□□ -0.95
LIG1-209ENST00000596104 MBD3L5A6NJ08 208 aaPredicted RBP9.13□□□□□ -0.95
LIG1-209ENST00000596104 CD8B2A6NJW9 211 aa9.13□□□□□ -0.95
LIG1-209ENST00000596104 WASHC1A8K0Z3 465 aa9.13□□□□□ -0.95
LIG1-209ENST00000596104 SAP18O00422 153 aaKnown RBP9.13□□□□□ -0.95
LIG1-209ENST00000596104 DYRK3O43781 588 aa9.13□□□□□ -0.95
LIG1-209ENST00000596104 SH3BGRLO75368 114 aa9.13□□□□□ -0.95
LIG1-209ENST00000596104 PRKRAO75569 313 aaKnown RBP9.13□□□□□ -0.95
LIG1-209ENST00000596104 PIAS1O75925 651 aa9.13□□□□□ -0.95
LIG1-209ENST00000596104 GOSR1O95249 250 aa9.13□□□□□ -0.95
LIG1-209ENST00000596104 IL2RAP01589 272 aa9.13□□□□□ -0.95
LIG1-209ENST00000596104 HRGP04196 525 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms