RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 TESQ9UGI8 421 aaKnown RBP12.59□□□□□ -0.39
VRK3-209ENST00000594948 KLHL21Q9UJP4 597 aa12.59□□□□□ -0.39
VRK3-209ENST00000594948 MAU2Q9Y6X3 613 aa12.59□□□□□ -0.39
VRK3-209ENST00000594948 NINQ8N4C6 2090 aa12.59□□□□□ -0.39
VRK3-209ENST00000594948 TRAV19A0A0A6YYK7 116 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 FABP12A6NFH5 140 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 POLR1CO15160 346 aaPredicted RBP12.58□□□□□ -0.4
VRK3-209ENST00000594948 OR10H3O60404 316 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 TP53P04637 393 aaPredicted RBP12.58□□□□□ -0.4
VRK3-209ENST00000594948 IL3P08700 152 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 ACADMP11310 421 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 MYL9P24844 172 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 RECQLP46063 649 aaPredicted RBP12.58□□□□□ -0.4
VRK3-209ENST00000594948 KCNJ5P48544 419 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 ATN1P54259 1190 aaPredicted RBP12.58□□□□□ -0.4
VRK3-209ENST00000594948 SLAMF1Q13291 335 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 TPBGQ13641 420 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 LEXMQ3ZCV2 418 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 TRIM60Q495X7 471 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 PLK5Q496M5 336 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 PDZK1Q5T2W1 519 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 PPP2R2DQ66LE6 453 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 DPPA4Q7L190 304 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 LRRC56Q8IYG6 542 aaPredicted RBP12.58□□□□□ -0.4
VRK3-209ENST00000594948 CACTIN-AS1Q8N1I8 211 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 TCEANCQ8N8B7 351 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 OR52I1Q8NGK6 324 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 OR2A12Q8NGT7 310 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 OR9A1PQ8NGU1 263 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 SLC38A5Q8WUX1 472 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 FGF11Q92914 225 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 KCTD7Q96MP8 289 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 NELL2Q99435 816 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 GON7Q9BXV9 100 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 SLC6A16Q9GZN6 736 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 OR51B5Q9H339 312 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 NEUROD4Q9HD90 331 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 TIGARQ9NQ88 270 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 AHSPQ9NZD4 102 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 TMEM129A0AVI4 362 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 H3BN98 237 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 PROM1O43490 865 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 MMP20O60882 483 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 TGFB1P01137 390 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 KLK1P06870 262 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 MSL3P1P0C860 447 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 CPN2P22792 545 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 GABRR2P28476 465 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 ERP29P30040 261 aaKnown RBP12.58□□□□□ -0.4
VRK3-209ENST00000594948 PPP3R1P63098 170 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 CYP4F8P98187 520 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 TMEM115Q12893 351 aaPredicted RBP12.58□□□□□ -0.4
VRK3-209ENST00000594948 ZNF628Q5EBL2 1059 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 LRRC73Q5JTD7 316 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 ZNF648Q5T619 568 aaPredicted RBP12.58□□□□□ -0.4
VRK3-209ENST00000594948 USP30Q70CQ3 517 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 PEX5LQ8IYB4 626 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 NRSN1Q8IZ57 195 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 CMTM8Q8IZV2 173 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 HORMAD2Q8N7B1 307 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 OR7G1Q8NGA0 311 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 HCAR2Q8TDS4 363 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 TMEM19Q96HH6 336 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 ZNF607Q96SK3 696 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 C11orf54Q9H0W9 315 aaPredicted RBP12.58□□□□□ -0.4
VRK3-209ENST00000594948 ANKRA2Q9H9E1 313 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 SPG21Q9NZD8 308 aa12.58□□□□□ -0.4
VRK3-209ENST00000594948 MYOFQ9NZM1 2061 aa12.57□□□□□ -0.4
VRK3-209ENST00000594948 LRRK1Q38SD2 2015 aa12.57□□□□□ -0.4
VRK3-209ENST00000594948 A0A1W2PQL4 384 aaPredicted RBP12.57□□□□□ -0.4
VRK3-209ENST00000594948 A0A1W2PRQ8 180 aa12.57□□□□□ -0.4
VRK3-209ENST00000594948 FAM227AF5H4B4 570 aa12.57□□□□□ -0.4
VRK3-209ENST00000594948 LEFTY2O00292 366 aa12.57□□□□□ -0.4
VRK3-209ENST00000594948 TMCC2O75069 709 aa12.57□□□□□ -0.4
VRK3-209ENST00000594948 BCHEP06276 602 aa12.57□□□□□ -0.4
VRK3-209ENST00000594948 TIMP2P16035 220 aa12.57□□□□□ -0.4
VRK3-209ENST00000594948 DDCP20711 480 aa12.57□□□□□ -0.4
VRK3-209ENST00000594948 AZGP1P25311 298 aaKnown RBP12.57□□□□□ -0.4
VRK3-209ENST00000594948 FGF9P31371 208 aaPredicted RBP12.57□□□□□ -0.4
VRK3-209ENST00000594948 ETV3P41162 512 aa12.57□□□□□ -0.4
VRK3-209ENST00000594948 FRKP42685 505 aaPredicted RBP12.57□□□□□ -0.4
VRK3-209ENST00000594948 WNT4P56705 351 aa12.57□□□□□ -0.4
VRK3-209ENST00000594948 GNG2P59768 71 aa12.57□□□□□ -0.4
VRK3-209ENST00000594948 EFNB1P98172 346 aa12.57□□□□□ -0.4
VRK3-209ENST00000594948 CNTN1Q12860 1018 aa12.57□□□□□ -0.4
VRK3-209ENST00000594948 HNRNPA0Q13151 305 aaKnown RBP12.57□□□□□ -0.4
VRK3-209ENST00000594948 CAMK2BQ13554 666 aa12.57□□□□□ -0.4
VRK3-209ENST00000594948 RIN1Q13671 783 aa12.57□□□□□ -0.4
VRK3-209ENST00000594948 QPRTQ15274 297 aa12.57□□□□□ -0.4
VRK3-209ENST00000594948 LCN1P1Q5VSP4 162 aa12.57□□□□□ -0.4
VRK3-209ENST00000594948 LIPKQ5VXJ0 399 aa12.57□□□□□ -0.4
VRK3-209ENST00000594948 SYCE2Q6PIF2 218 aa12.57□□□□□ -0.4
VRK3-209ENST00000594948 TMEM220Q6QAJ8 160 aa12.57□□□□□ -0.4
VRK3-209ENST00000594948 QSOX2Q6ZRP7 698 aa12.57□□□□□ -0.4
VRK3-209ENST00000594948 Q6ZVU0 165 aa12.57□□□□□ -0.4
VRK3-209ENST00000594948 ZNF438Q7Z4V0 828 aa12.57□□□□□ -0.4
VRK3-209ENST00000594948 SLC9B2Q86UD5 537 aa12.57□□□□□ -0.4
VRK3-209ENST00000594948 LILRA3Q8N6C8 439 aaPredicted RBP12.57□□□□□ -0.4
VRK3-209ENST00000594948 FOXJ1Q92949 421 aa12.57□□□□□ -0.4
VRK3-209ENST00000594948 DIRAS2Q96HU8 199 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms