RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 ID2Q02363 134 aa24.05■■□□□ 1.44
TRIM28-204ENST00000594806 ZNF763Q0D2J5 394 aa24.05■■□□□ 1.44
TRIM28-204ENST00000594806 KIAA0040Q15053 153 aa24.05■■□□□ 1.44
TRIM28-204ENST00000594806 NR6A1Q15406 480 aa24.05■■□□□ 1.44
TRIM28-204ENST00000594806 ABHD17BQ5VST6 288 aa24.05■■□□□ 1.44
TRIM28-204ENST00000594806 ATG14Q6ZNE5 492 aa24.05■■□□□ 1.44
TRIM28-204ENST00000594806 SIRT6Q8N6T7 355 aa24.05■■□□□ 1.44
TRIM28-204ENST00000594806 APCDD1LQ8NCL9 501 aa24.05■■□□□ 1.44
TRIM28-204ENST00000594806 C16orf78Q8WTQ4 265 aa24.05■■□□□ 1.44
TRIM28-204ENST00000594806 PTPMT1Q8WUK0 201 aaPredicted RBP24.05■■□□□ 1.44
TRIM28-204ENST00000594806 ART5Q96L15 291 aa24.05■■□□□ 1.44
TRIM28-204ENST00000594806 RNF32Q9H0A6 362 aa24.05■■□□□ 1.44
TRIM28-204ENST00000594806 CES1P1Q9UKY3 287 aa24.05■■□□□ 1.44
TRIM28-204ENST00000594806 DLGAP4Q9Y2H0 992 aa24.05■■□□□ 1.44
TRIM28-204ENST00000594806 TMEM233B4DJY2 109 aa24.04■■□□□ 1.44
TRIM28-204ENST00000594806 PRB1P04280 392 aa24.04■■□□□ 1.44
TRIM28-204ENST00000594806 MEP1AQ16819 746 aa24.04■■□□□ 1.44
TRIM28-204ENST00000594806 TTMPQ5BVD1 217 aa24.04■■□□□ 1.44
TRIM28-204ENST00000594806 CES4AQ5XG92 561 aa24.04■■□□□ 1.44
TRIM28-204ENST00000594806 NOXRED1Q6NXP6 359 aa24.04■■□□□ 1.44
TRIM28-204ENST00000594806 SAMD14Q8IZD0 417 aaPredicted RBP24.04■■□□□ 1.44
TRIM28-204ENST00000594806 AGR3Q8TD06 166 aa24.04■■□□□ 1.44
TRIM28-204ENST00000594806 MGARPQ8TDB4 240 aa24.04■■□□□ 1.44
TRIM28-204ENST00000594806 PPP3R2Q96LZ3 170 aa24.04■■□□□ 1.44
TRIM28-204ENST00000594806 THAP1Q9NVV9 213 aa24.04■■□□□ 1.44
TRIM28-204ENST00000594806 EHD3Q9NZN3 535 aa24.04■■□□□ 1.44
TRIM28-204ENST00000594806 ABI3Q9P2A4 366 aa24.04■■□□□ 1.44
TRIM28-204ENST00000594806 HEMK1Q9Y5R4 338 aaPredicted RBP24.04■■□□□ 1.44
TRIM28-204ENST00000594806 DYTNA2CJ06 578 aa24.03■■□□□ 1.44
TRIM28-204ENST00000594806 PIP5K1BO14986 540 aa24.03■■□□□ 1.44
TRIM28-204ENST00000594806 OR10H2O60403 315 aa24.03■■□□□ 1.44
TRIM28-204ENST00000594806 LYPLA1O75608 230 aaPredicted RBP24.03■■□□□ 1.44
TRIM28-204ENST00000594806 RPL14P50914 215 aaKnown RBP24.03■■□□□ 1.44
TRIM28-204ENST00000594806 XKP51811 444 aa24.03■■□□□ 1.44
TRIM28-204ENST00000594806 BST1Q10588 318 aa24.03■■□□□ 1.44
TRIM28-204ENST00000594806 SPRED3Q2MJR0 410 aa24.03■■□□□ 1.44
TRIM28-204ENST00000594806 XKR7Q5GH72 579 aa24.03■■□□□ 1.44
TRIM28-204ENST00000594806 IKBIPQ70UQ0 350 aa24.03■■□□□ 1.44
TRIM28-204ENST00000594806 ARMC10Q8N2F6 343 aa24.03■■□□□ 1.44
TRIM28-204ENST00000594806 RBMXL3Q8N7X1 1067 aaKnown RBP24.03■■□□□ 1.44
TRIM28-204ENST00000594806 OR1N1Q8NGS0 311 aa24.03■■□□□ 1.44
TRIM28-204ENST00000594806 HAS2Q92819 552 aa24.03■■□□□ 1.44
TRIM28-204ENST00000594806 NCLNQ969V3 563 aa24.03■■□□□ 1.44
TRIM28-204ENST00000594806 FCRL1Q96LA6 429 aa24.03■■□□□ 1.44
TRIM28-204ENST00000594806 DEFB126Q9BYW3 111 aa24.03■■□□□ 1.44
TRIM28-204ENST00000594806 MYNNQ9NPC7 610 aa24.03■■□□□ 1.44
TRIM28-204ENST00000594806 STMN3Q9NZ72 180 aa24.03■■□□□ 1.44
TRIM28-204ENST00000594806 A8MUI8 341 aa24.02■■□□□ 1.44
TRIM28-204ENST00000594806 LSM1O15116 133 aaKnown RBP24.02■■□□□ 1.44
TRIM28-204ENST00000594806 IL3P08700 152 aa24.02■■□□□ 1.44
TRIM28-204ENST00000594806 ACER2Q5QJU3 275 aa24.02■■□□□ 1.44
TRIM28-204ENST00000594806 LINC00696Q6ZRV3 163 aa24.02■■□□□ 1.44
TRIM28-204ENST00000594806 RPS19BP1Q86WX3 136 aaKnown RBP24.02■■□□□ 1.44
TRIM28-204ENST00000594806 PTRH1Q86Y79 214 aaKnown RBP24.02■■□□□ 1.44
TRIM28-204ENST00000594806 ZNF781Q8N8C0 355 aa24.02■■□□□ 1.44
TRIM28-204ENST00000594806 OR2T11Q8NH01 316 aa24.02■■□□□ 1.44
TRIM28-204ENST00000594806 OR8K3Q8NH51 312 aa24.02■■□□□ 1.44
TRIM28-204ENST00000594806 PUM2Q8TB72 1066 aaKnown RBP eCLIP24.02■■□□□ 1.44
TRIM28-204ENST00000594806 UCN3Q969E3 161 aa24.02■■□□□ 1.44
TRIM28-204ENST00000594806 PNPLA2Q96AD5 504 aa24.02■■□□□ 1.44
TRIM28-204ENST00000594806 SORT1Q99523 831 aa24.02■■□□□ 1.44
TRIM28-204ENST00000594806 EBPLQ9BY08 206 aa24.02■■□□□ 1.44
TRIM28-204ENST00000594806 C20orf27Q9GZN8 174 aa24.02■■□□□ 1.44
TRIM28-204ENST00000594806 MANSC1Q9H8J5 431 aa24.02■■□□□ 1.44
TRIM28-204ENST00000594806 SDAD1Q9NVU7 687 aaKnown RBP eCLIP24.02■■□□□ 1.444e-8■■□□□ 14.4
TRIM28-204ENST00000594806 COPS7AQ9UBW8 275 aa24.02■■□□□ 1.44
TRIM28-204ENST00000594806 PTGDR2Q9Y5Y4 395 aa24.02■■□□□ 1.44
TRIM28-204ENST00000594806 UQCRHLA0A096LP55 91 aa24.01■■□□□ 1.43
TRIM28-204ENST00000594806 MYOCOSA0A1B0GUC4 107 aa24.01■■□□□ 1.43
TRIM28-204ENST00000594806 WASHC1A8K0Z3 465 aa24.01■■□□□ 1.43
TRIM28-204ENST00000594806 KLF11O14901 512 aa24.01■■□□□ 1.43
TRIM28-204ENST00000594806 SASH3O75995 380 aa24.01■■□□□ 1.43
TRIM28-204ENST00000594806 ZFAND5O76080 213 aa24.01■■□□□ 1.43
TRIM28-204ENST00000594806 DDAH2O95865 285 aa24.01■■□□□ 1.43
TRIM28-204ENST00000594806 CPMP14384 443 aa24.01■■□□□ 1.43
TRIM28-204ENST00000594806 PORP16435 677 aaPredicted RBP24.01■■□□□ 1.43
TRIM28-204ENST00000594806 CSNK2A2P19784 350 aaPredicted RBP24.01■■□□□ 1.43
TRIM28-204ENST00000594806 MAPK1P28482 360 aa24.01■■□□□ 1.43
TRIM28-204ENST00000594806 ALDH9A1P49189 494 aa24.01■■□□□ 1.43
TRIM28-204ENST00000594806 B3GNTL1Q67FW5 361 aaPredicted RBP24.01■■□□□ 1.43
TRIM28-204ENST00000594806 Q6ZS92 163 aa24.01■■□□□ 1.43
TRIM28-204ENST00000594806 SLC2A12Q8TD20 617 aa24.01■■□□□ 1.43
TRIM28-204ENST00000594806 RIT1Q92963 219 aa24.01■■□□□ 1.43
TRIM28-204ENST00000594806 FBXL20Q96IG2 436 aa24.01■■□□□ 1.43
TRIM28-204ENST00000594806 ZBTB20Q9HC78 741 aaPredicted RBP24.01■■□□□ 1.43
TRIM28-204ENST00000594806 RYDENQ9NUL5 291 aaKnown RBP24.01■■□□□ 1.43
TRIM28-204ENST00000594806 B3GNT3Q9Y2A9 372 aa24.01■■□□□ 1.43
TRIM28-204ENST00000594806 POLR3HQ9Y535 204 aaPredicted RBP24.01■■□□□ 1.43
TRIM28-204ENST00000594806 ZNF780BQ9Y6R6 833 aa24.01■■□□□ 1.43
TRIM28-204ENST00000594806 TRBV11-1A0A0K0K1C0 115 aa24■■□□□ 1.43
TRIM28-204ENST00000594806 SUV39H1O43463 412 aa24■■□□□ 1.43
TRIM28-204ENST00000594806 SNNO75324 88 aaPredicted RBP24■■□□□ 1.43
TRIM28-204ENST00000594806 DDCP20711 480 aa24■■□□□ 1.43
TRIM28-204ENST00000594806 ATP6AP1LQ52LC2 224 aa24■■□□□ 1.43
TRIM28-204ENST00000594806 FAM71E1Q6IPT2 247 aa24■■□□□ 1.43
TRIM28-204ENST00000594806 HSDL2Q6YN16 418 aa24■■□□□ 1.43
TRIM28-204ENST00000594806 CRLF3Q8IUI8 442 aa24■■□□□ 1.43
TRIM28-204ENST00000594806 KIF2BQ8N4N8 673 aa24■■□□□ 1.43
TRIM28-204ENST00000594806 PPWD1Q96BP3 646 aaKnown RBP24■■□□□ 1.43
TRIM28-204ENST00000594806 KLHL29Q96CT2 875 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms