RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 RIT1Q92963 219 aa14.17□□□□□ -0.14
TRIM28-203ENST00000593582 FBXL20Q96IG2 436 aa14.17□□□□□ -0.14
TRIM28-203ENST00000593582 MRPL1Q9BYD6 325 aaKnown RBP14.17□□□□□ -0.14
TRIM28-203ENST00000593582 L2HGDHQ9H9P8 463 aa14.17□□□□□ -0.14
TRIM28-203ENST00000593582 BRF2Q9HAW0 419 aa14.17□□□□□ -0.14
TRIM28-203ENST00000593582 NMRK1Q9NWW6 199 aa14.17□□□□□ -0.14
TRIM28-203ENST00000593582 SUCOQ9UBS9 1254 aaKnown RBP14.17□□□□□ -0.14
TRIM28-203ENST00000593582 TRPS1Q9UHF7 1281 aa14.17□□□□□ -0.14
TRIM28-203ENST00000593582 SLC12A4Q9UP95 1085 aa14.17□□□□□ -0.14
TRIM28-203ENST00000593582 TFECO14948 347 aaPredicted RBP14.16□□□□□ -0.14
TRIM28-203ENST00000593582 OR6B1O95007 311 aa14.16□□□□□ -0.14
TRIM28-203ENST00000593582 PDYNP01213 254 aa14.16□□□□□ -0.14
TRIM28-203ENST00000593582 IGKV3-11P04433 115 aa14.16□□□□□ -0.14
TRIM28-203ENST00000593582 IMPDH1P20839 514 aa14.16□□□□□ -0.14
TRIM28-203ENST00000593582 GPR85P60893 370 aa14.16□□□□□ -0.14
TRIM28-203ENST00000593582 RASA2Q15283 850 aa14.16□□□□□ -0.14
TRIM28-203ENST00000593582 RNFT1Q5M7Z0 435 aa14.16□□□□□ -0.14
TRIM28-203ENST00000593582 ZNF678Q5SXM1 525 aa14.16□□□□□ -0.14
TRIM28-203ENST00000593582 CCNYL2Q5T2Q4 361 aa14.16□□□□□ -0.14
TRIM28-203ENST00000593582 HIST2H2BCQ6DN03 193 aa14.16□□□□□ -0.14
TRIM28-203ENST00000593582 OR52E8Q6IFG1 317 aa14.16□□□□□ -0.14
TRIM28-203ENST00000593582 MTFR2Q6P444 385 aa14.16□□□□□ -0.14
TRIM28-203ENST00000593582 ZGRF1Q86YA3 2104 aa14.16□□□□□ -0.14
TRIM28-203ENST00000593582 GHDCQ8N2G8 530 aa14.16□□□□□ -0.14
TRIM28-203ENST00000593582 METTL4Q8N3J2 472 aa14.16□□□□□ -0.14
TRIM28-203ENST00000593582 PSD4Q8NDX1 1056 aa14.16□□□□□ -0.14
TRIM28-203ENST00000593582 NUBPLQ8TB37 319 aa14.16□□□□□ -0.14
TRIM28-203ENST00000593582 TMEM237Q96Q45 408 aa14.16□□□□□ -0.14
TRIM28-203ENST00000593582 CNPPD1Q9BV87 410 aa14.16□□□□□ -0.14
TRIM28-203ENST00000593582 PPCSQ9HAB8 311 aa14.16□□□□□ -0.14
TRIM28-203ENST00000593582 FARSBQ9NSD9 589 aaKnown RBP14.16□□□□□ -0.14
TRIM28-203ENST00000593582 DCDC2Q9UHG0 476 aa14.16□□□□□ -0.14
TRIM28-203ENST00000593582 SH3BGRL2Q9UJC5 107 aa14.16□□□□□ -0.14
TRIM28-203ENST00000593582 WASHC1A8K0Z3 465 aa14.15□□□□□ -0.14
TRIM28-203ENST00000593582 CCL21O00585 134 aa14.15□□□□□ -0.14
TRIM28-203ENST00000593582 PGRMC2O15173 223 aa14.15□□□□□ -0.14
TRIM28-203ENST00000593582 GUCY1B2O75343 617 aa14.15□□□□□ -0.14
TRIM28-203ENST00000593582 OR4F21O95013 312 aa14.15□□□□□ -0.14
TRIM28-203ENST00000593582 KRT6AP02538 564 aa14.15□□□□□ -0.14
TRIM28-203ENST00000593582 KRT6BP04259 564 aa14.15□□□□□ -0.14
TRIM28-203ENST00000593582 SLC35E2P0CK97 266 aa14.15□□□□□ -0.14
TRIM28-203ENST00000593582 PIK3R1P27986 724 aa14.15□□□□□ -0.14
TRIM28-203ENST00000593582 TNFRSF8P28908 595 aa14.15□□□□□ -0.14
TRIM28-203ENST00000593582 KRT6CP48668 564 aa14.15□□□□□ -0.14
TRIM28-203ENST00000593582 MAPK12P53778 367 aa14.15□□□□□ -0.14
TRIM28-203ENST00000593582 PRKAA2P54646 552 aa14.15□□□□□ -0.14
TRIM28-203ENST00000593582 ASPHQ12797 758 aa14.15□□□□□ -0.14
TRIM28-203ENST00000593582 ZNF267Q14586 743 aaPredicted RBP14.15□□□□□ -0.14
TRIM28-203ENST00000593582 MPEG1Q2M385 716 aa14.15□□□□□ -0.14
TRIM28-203ENST00000593582 SPRED3Q2MJR0 410 aa14.15□□□□□ -0.14
TRIM28-203ENST00000593582 UNC50Q53HI1 259 aa14.15□□□□□ -0.14
TRIM28-203ENST00000593582 NDUFAF5Q5TEU4 345 aa14.15□□□□□ -0.14
TRIM28-203ENST00000593582 OPN5Q6U736 354 aa14.15□□□□□ -0.14
TRIM28-203ENST00000593582 DGAT2L6Q6ZPD8 337 aa14.15□□□□□ -0.14
TRIM28-203ENST00000593582 RTL4Q6ZR62 310 aa14.15□□□□□ -0.14
TRIM28-203ENST00000593582 SLC29A4Q7RTT9 530 aa14.15□□□□□ -0.14
TRIM28-203ENST00000593582 COMMD6Q7Z4G1 85 aa14.15□□□□□ -0.14
TRIM28-203ENST00000593582 SPPL2CQ8IUH8 684 aa14.15□□□□□ -0.14
TRIM28-203ENST00000593582 CDYL2Q8N8U2 506 aa14.15□□□□□ -0.14
TRIM28-203ENST00000593582 MZB1Q8WU39 189 aa14.15□□□□□ -0.14
TRIM28-203ENST00000593582 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.15□□□□□ -0.14
TRIM28-203ENST00000593582 SGCZQ96LD1 299 aa14.15□□□□□ -0.14
TRIM28-203ENST00000593582 ZNF382Q96SR6 550 aa14.15□□□□□ -0.14
TRIM28-203ENST00000593582 TEX10Q9NXF1 929 aaPredicted RBP14.15□□□□□ -0.14
TRIM28-203ENST00000593582 ZNF225Q9UK10 706 aa14.15□□□□□ -0.14
TRIM28-203ENST00000593582 STK38LQ9Y2H1 464 aa14.15□□□□□ -0.14
TRIM28-203ENST00000593582 HRKO00198 91 aa14.14□□□□□ -0.15
TRIM28-203ENST00000593582 SHBGP04278 402 aa14.14□□□□□ -0.15
TRIM28-203ENST00000593582 ABOP16442 354 aa14.14□□□□□ -0.15
TRIM28-203ENST00000593582 KRT15P19012 456 aa14.14□□□□□ -0.15
TRIM28-203ENST00000593582 GALNSP34059 522 aa14.14□□□□□ -0.15
TRIM28-203ENST00000593582 RFC3P40938 356 aa14.14□□□□□ -0.15
TRIM28-203ENST00000593582 SLCO1A2P46721 670 aa14.14□□□□□ -0.15
TRIM28-203ENST00000593582 ERVK-8P63133 956 aa14.14□□□□□ -0.15
TRIM28-203ENST00000593582 LCP2Q13094 533 aa14.14□□□□□ -0.15
TRIM28-203ENST00000593582 PIGGQ5H8A4 983 aa14.14□□□□□ -0.15
TRIM28-203ENST00000593582 BNC2Q6ZN30 1099 aaPredicted RBP14.14□□□□□ -0.15
TRIM28-203ENST00000593582 RNF111Q6ZNA4 994 aa14.14□□□□□ -0.15
TRIM28-203ENST00000593582 GPRIN3Q6ZVF9 776 aa14.14□□□□□ -0.15
TRIM28-203ENST00000593582 C9orf40Q8IXQ3 194 aa14.14□□□□□ -0.15
TRIM28-203ENST00000593582 ZFP62Q8NB50 900 aaPredicted RBP14.14□□□□□ -0.15
TRIM28-203ENST00000593582 GOLM1Q8NBJ4 401 aa14.14□□□□□ -0.15
TRIM28-203ENST00000593582 OR4K14Q8NGD5 310 aa14.14□□□□□ -0.15
TRIM28-203ENST00000593582 METTL6Q8TCB7 284 aa14.14□□□□□ -0.15
TRIM28-203ENST00000593582 SLC22A8Q8TCC7 542 aa14.14□□□□□ -0.15
TRIM28-203ENST00000593582 CCDC126Q96EE4 140 aa14.14□□□□□ -0.15
TRIM28-203ENST00000593582 L3HYPDHQ96EM0 354 aa14.14□□□□□ -0.15
TRIM28-203ENST00000593582 VPS29Q9UBQ0 182 aa14.14□□□□□ -0.15
TRIM28-203ENST00000593582 ERVK-19Q9WJR5 959 aa14.14□□□□□ -0.15
TRIM28-203ENST00000593582 ZNF835Q9Y2P0 537 aa14.14□□□□□ -0.15
TRIM28-203ENST00000593582 A0A1W2PPM1 405 aa14.13□□□□□ -0.15
TRIM28-203ENST00000593582 CCDC151A5D8V7 595 aa14.13□□□□□ -0.15
TRIM28-203ENST00000593582 MANBAO00462 879 aa14.13□□□□□ -0.15
TRIM28-203ENST00000593582 HS6ST1O60243 411 aa14.13□□□□□ -0.15
TRIM28-203ENST00000593582 GLRA3O75311 464 aa14.13□□□□□ -0.15
TRIM28-203ENST00000593582 ULK1O75385 1050 aa14.13□□□□□ -0.15
TRIM28-203ENST00000593582 ESRRAP11474 423 aaPredicted RBP14.13□□□□□ -0.15
TRIM28-203ENST00000593582 HSD3B1P14060 373 aa14.13□□□□□ -0.15
TRIM28-203ENST00000593582 HSD3B2P26439 372 aa14.13□□□□□ -0.15
TRIM28-203ENST00000593582 COL8A1P27658 744 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms