RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 NAXEQ8NCW5 288 aa15.05■□□□□ -0
LIG1-205ENST00000593425 FAM13CQ8NE31 585 aa15.05■□□□□ -0
LIG1-205ENST00000593425 OR7G3Q8NG95 312 aa15.05■□□□□ -0
LIG1-205ENST00000593425 OR10G3Q8NGC4 313 aa15.05■□□□□ -0
LIG1-205ENST00000593425 NINJ1Q92982 152 aa15.05■□□□□ -0
LIG1-205ENST00000593425 FBXL20Q96IG2 436 aa15.05■□□□□ -0
LIG1-205ENST00000593425 GAL3ST4Q96RP7 486 aa15.05■□□□□ -0
LIG1-205ENST00000593425 CPNE1Q99829 537 aa15.05■□□□□ -0
LIG1-205ENST00000593425 ERVK-6Q9BXR3 956 aa15.05■□□□□ -0
LIG1-205ENST00000593425 POLDIP3Q9BY77 421 aaKnown RBP15.05■□□□□ -0
LIG1-205ENST00000593425 ALG9Q9H6U8 611 aa15.05■□□□□ -0
LIG1-205ENST00000593425 RPF2Q9H7B2 306 aaKnown RBP15.05■□□□□ -0
LIG1-205ENST00000593425 ZFP64Q9NPA5 681 aa15.05■□□□□ -0
LIG1-205ENST00000593425 ST6GALNAC2Q9UJ37 374 aa15.05■□□□□ -0
LIG1-205ENST00000593425 BOKQ9UMX3 212 aaPredicted RBP15.05■□□□□ -0
LIG1-205ENST00000593425 ERVK-19Q9WJR5 959 aa15.05■□□□□ -0
LIG1-205ENST00000593425 CHCHD2Q9Y6H1 151 aaPredicted RBP15.05■□□□□ -0
LIG1-205ENST00000593425 ZNF469Q96JG9 3925 aaPredicted RBP15.05■□□□□ -0
LIG1-205ENST00000593425 KIAA1549Q9HCM3 1950 aa15.04■□□□□ -0
LIG1-205ENST00000593425 TCRBV9S1A1TA0A576 114 aa15.04■□□□□ -0
LIG1-205ENST00000593425 UBXN8O00124 270 aa15.04■□□□□ -0
LIG1-205ENST00000593425 TRPC1P48995 793 aa15.04■□□□□ -0
LIG1-205ENST00000593425 WNT3P56703 355 aa15.04■□□□□ -0
LIG1-205ENST00000593425 ILF2Q12905 390 aaKnown RBP15.04■□□□□ -0
LIG1-205ENST00000593425 DDX39BQ13838 428 aaKnown RBP15.04■□□□□ -0
LIG1-205ENST00000593425 DEPDC1Q5TB30 811 aa15.04■□□□□ -0
LIG1-205ENST00000593425 CHSY3Q70JA7 882 aa15.04■□□□□ -0
LIG1-205ENST00000593425 TGIF2LYQ8IUE0 185 aa15.04■□□□□ -0
LIG1-205ENST00000593425 ULK2Q8IYT8 1036 aa15.04■□□□□ -0
LIG1-205ENST00000593425 SLC15A4Q8N697 577 aa15.04■□□□□ -0
LIG1-205ENST00000593425 NEIL3Q8TAT5 605 aa15.04■□□□□ -0
LIG1-205ENST00000593425 PYROXD1Q8WU10 500 aa15.04■□□□□ -0
LIG1-205ENST00000593425 CDKL2Q92772 493 aa15.04■□□□□ -0
LIG1-205ENST00000593425 UBE2E3Q969T4 207 aa15.04■□□□□ -0
LIG1-205ENST00000593425 CMTM7Q96FZ5 175 aa15.04■□□□□ -0
LIG1-205ENST00000593425 RBM18Q96H35 190 aaKnown RBP15.04■□□□□ -0
LIG1-205ENST00000593425 ART5Q96L15 291 aa15.04■□□□□ -0
LIG1-205ENST00000593425 KCNF1Q9H3M0 494 aa15.04■□□□□ -0
LIG1-205ENST00000593425 SAYSD1Q9NPB0 183 aa15.04■□□□□ -0
LIG1-205ENST00000593425 NUDT4Q9NZJ9 180 aa15.04■□□□□ -0
LIG1-205ENST00000593425 CRIM1Q9NZV1 1036 aa15.04■□□□□ -0
LIG1-205ENST00000593425 TXNDC16Q9P2K2 825 aa15.04■□□□□ -0
LIG1-205ENST00000593425 B4GALT7Q9UBV7 327 aa15.04■□□□□ -0
LIG1-205ENST00000593425 CNOT11Q9UKZ1 510 aaKnown RBP15.04■□□□□ -0
LIG1-205ENST00000593425 SETD2Q9BYW2 2564 aaPredicted RBP15.04■□□□□ -0
LIG1-205ENST00000593425 NF1P21359 2839 aa15.03■□□□□ -0
LIG1-205ENST00000593425 SPG11Q96JI7 2443 aa15.03■□□□□ -0
LIG1-205ENST00000593425 PRRC2AP48634 2157 aaKnown RBP15.03■□□□□ -0
LIG1-205ENST00000593425 FAM159BA6NKW6 160 aa15.03■□□□□ -0
LIG1-205ENST00000593425 WASHC1A8K0Z3 465 aa15.03■□□□□ -0
LIG1-205ENST00000593425 SUPT3HB4E1H0 165 aa15.03■□□□□ -0
LIG1-205ENST00000593425 CCDC188H7C350 402 aa15.03■□□□□ -0
LIG1-205ENST00000593425 K7EPI3 171 aa15.03■□□□□ -0
LIG1-205ENST00000593425 PLPP1O14494 284 aa15.03■□□□□ -0
LIG1-205ENST00000593425 DYRK3O43781 588 aa15.03■□□□□ -0
LIG1-205ENST00000593425 SUPT3HO75486 399 aa15.03■□□□□ -0
LIG1-205ENST00000593425 CLPSP04118 112 aa15.03■□□□□ -0
LIG1-205ENST00000593425 FREM3P0C091 2139 aa15.03■□□□□ -0
LIG1-205ENST00000593425 FBXO45P0C2W1 286 aa15.03■□□□□ -0
LIG1-205ENST00000593425 ALOX15P16050 662 aaPredicted RBP15.03■□□□□ -0
LIG1-205ENST00000593425 UQCRC1P31930 480 aa15.03■□□□□ -0
LIG1-205ENST00000593425 GP5P40197 560 aa15.03■□□□□ -0
LIG1-205ENST00000593425 KIR2DL3P43628 341 aa15.03■□□□□ -0
LIG1-205ENST00000593425 EBPQ15125 230 aaKnown RBP15.03■□□□□ -0
LIG1-205ENST00000593425 CEBPEQ15744 281 aa15.03■□□□□ -0
LIG1-205ENST00000593425 SPRED3Q2MJR0 410 aa15.03■□□□□ -0
LIG1-205ENST00000593425 GRHL2Q6ISB3 625 aa15.03■□□□□ -0
LIG1-205ENST00000593425 CMC1Q7Z7K0 106 aa15.03■□□□□ -0
LIG1-205ENST00000593425 ISCA2Q86U28 154 aa15.03■□□□□ -0
LIG1-205ENST00000593425 GPR180Q86V85 440 aa15.03■□□□□ -0
LIG1-205ENST00000593425 ST13P4Q8IZP2 240 aaPredicted RBP15.03■□□□□ -0
LIG1-205ENST00000593425 C7orf57Q8NEG2 295 aa15.03■□□□□ -0
LIG1-205ENST00000593425 HUS1BQ8NHY5 278 aa15.03■□□□□ -0
LIG1-205ENST00000593425 UBTD2Q8WUN7 234 aa15.03■□□□□ -0
LIG1-205ENST00000593425 JSRP1Q96MG2 331 aaPredicted RBP15.03■□□□□ -0
LIG1-205ENST00000593425 ATOH8Q96SQ7 321 aa15.03■□□□□ -0
LIG1-205ENST00000593425 SH3GL2Q99962 352 aa15.03■□□□□ -0
LIG1-205ENST00000593425 ZNF717Q9BY31 904 aaPredicted RBP15.03■□□□□ -0
LIG1-205ENST00000593425 WWTR1Q9GZV5 400 aa15.03■□□□□ -0
LIG1-205ENST00000593425 CLEC4MQ9H2X3 399 aaPredicted RBP15.03■□□□□ -0
LIG1-205ENST00000593425 ACKR4Q9NPB9 350 aa15.03■□□□□ -0
LIG1-205ENST00000593425 DMRT3Q9NQL9 472 aa15.03■□□□□ -0
LIG1-205ENST00000593425 RASSF1Q9NS23 344 aa15.03■□□□□ -0
LIG1-205ENST00000593425 IGSF5Q9NSI5 407 aa15.03■□□□□ -0
LIG1-205ENST00000593425 MS4A12Q9NXJ0 267 aa15.03■□□□□ -0
LIG1-205ENST00000593425 OPTCQ9UBM4 332 aa15.03■□□□□ -0
LIG1-205ENST00000593425 PHF11Q9UIL8 331 aa15.03■□□□□ -0
LIG1-205ENST00000593425 NINQ8N4C6 2090 aa15.02■□□□□ -0
LIG1-205ENST00000593425 EXPH5Q8NEV8 1989 aa15.02■□□□□ -0
LIG1-205ENST00000593425 FAM221AA4D161 298 aa15.02■□□□□ -0
LIG1-205ENST00000593425 FAM47E-STBD1D6RA91 191 aa15.02■□□□□ -0
LIG1-205ENST00000593425 FAM155BO75949 473 aa15.02■□□□□ -0
LIG1-205ENST00000593425 SLC35E2BP0CK96 405 aa15.02■□□□□ -0
LIG1-205ENST00000593425 SERPINB1P30740 379 aa15.02■□□□□ -0
LIG1-205ENST00000593425 RAP1GDS1P52306 607 aa15.02■□□□□ -0
LIG1-205ENST00000593425 SLC37A1P57057 533 aa15.02■□□□□ -0
LIG1-205ENST00000593425 PCDH1Q08174 1060 aa15.02■□□□□ -0
LIG1-205ENST00000593425 TBL3Q12788 808 aaKnown RBP15.02■□□□□ -0
LIG1-205ENST00000593425 ZNF267Q14586 743 aaPredicted RBP15.02■□□□□ -0
LIG1-205ENST00000593425 NTRK2Q16620 822 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms