RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 WBP11Q9Y2W2 641 aaKnown RBP13.96□□□□□ -0.17
DDX39A-221ENST00000593026 PCDHGA9Q9Y5G4 932 aaKnown RBP13.96□□□□□ -0.17
DDX39A-221ENST00000593026 MED13Q9UHV7 2174 aa13.95□□□□□ -0.18
DDX39A-221ENST00000593026 EIF4E1BA6NMX2 242 aaKnown RBP13.95□□□□□ -0.18
DDX39A-221ENST00000593026 ATXN7O15265 892 aaPredicted RBP13.95□□□□□ -0.18
DDX39A-221ENST00000593026 DYRK3O43781 588 aa13.95□□□□□ -0.18
DDX39A-221ENST00000593026 KLHL41O60662 606 aa13.95□□□□□ -0.18
DDX39A-221ENST00000593026 VPS4BO75351 444 aa13.95□□□□□ -0.18
DDX39A-221ENST00000593026 CELA2AP08217 269 aa13.95□□□□□ -0.18
DDX39A-221ENST00000593026 SLC35E2P0CK97 266 aa13.95□□□□□ -0.18
DDX39A-221ENST00000593026 ITGAMP11215 1152 aa13.95□□□□□ -0.18
DDX39A-221ENST00000593026 SFTPCP11686 197 aa13.95□□□□□ -0.18
DDX39A-221ENST00000593026 BCKDHAP12694 445 aa13.95□□□□□ -0.18
DDX39A-221ENST00000593026 DDCP20711 480 aa13.95□□□□□ -0.18
DDX39A-221ENST00000593026 TACR1P25103 407 aa13.95□□□□□ -0.18
DDX39A-221ENST00000593026 MAD2L1Q13257 205 aaPredicted RBP13.95□□□□□ -0.18
DDX39A-221ENST00000593026 FAM71E1Q6IPT2 247 aa13.95□□□□□ -0.18
DDX39A-221ENST00000593026 JMJD6Q6NYC1 403 aaPredicted RBP13.95□□□□□ -0.18
DDX39A-221ENST00000593026 PCSK4Q6UW60 755 aa13.95□□□□□ -0.18
DDX39A-221ENST00000593026 AMER2Q8N7J2 671 aa13.95□□□□□ -0.18
DDX39A-221ENST00000593026 EXD3Q8N9H8 876 aa13.95□□□□□ -0.18
DDX39A-221ENST00000593026 NFAM1Q8NET5 270 aaPredicted RBP13.95□□□□□ -0.18
DDX39A-221ENST00000593026 OR14A16Q8NHC5 309 aa13.95□□□□□ -0.18
DDX39A-221ENST00000593026 C9orf43Q8TAL5 461 aaPredicted RBP13.95□□□□□ -0.18
DDX39A-221ENST00000593026 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.95□□□□□ -0.18
DDX39A-221ENST00000593026 PTPMT1Q8WUK0 201 aaPredicted RBP13.95□□□□□ -0.18
DDX39A-221ENST00000593026 DAZLQ92904 295 aaKnown RBP13.95□□□□□ -0.18
DDX39A-221ENST00000593026 ABHD17AQ96GS6 310 aa13.95□□□□□ -0.18
DDX39A-221ENST00000593026 RBM18Q96H35 190 aaKnown RBP13.95□□□□□ -0.18
DDX39A-221ENST00000593026 EGLN2Q96KS0 407 aa13.95□□□□□ -0.18
DDX39A-221ENST00000593026 TSSK3Q96PN8 268 aa13.95□□□□□ -0.18
DDX39A-221ENST00000593026 C1orf50Q9BV19 199 aa13.95□□□□□ -0.18
DDX39A-221ENST00000593026 NUDT9Q9BW91 350 aa13.95□□□□□ -0.18
DDX39A-221ENST00000593026 AKTIPQ9H8T0 292 aa13.95□□□□□ -0.18
DDX39A-221ENST00000593026 MMP25Q9NPA2 562 aa13.95□□□□□ -0.18
DDX39A-221ENST00000593026 EHD3Q9NZN3 535 aa13.95□□□□□ -0.18
DDX39A-221ENST00000593026 UTS2RQ9UKP6 389 aa13.95□□□□□ -0.18
DDX39A-221ENST00000593026 ZNF780BQ9Y6R6 833 aa13.95□□□□□ -0.18
DDX39A-221ENST00000593026 A0A1W2PS29 197 aa13.94□□□□□ -0.18
DDX39A-221ENST00000593026 C17orf105B2RV13 164 aa13.94□□□□□ -0.18
DDX39A-221ENST00000593026 ALPPP05187 535 aa13.94□□□□□ -0.18
DDX39A-221ENST00000593026 CPMP14384 443 aa13.94□□□□□ -0.18
DDX39A-221ENST00000593026 PORP16435 677 aaPredicted RBP13.94□□□□□ -0.18
DDX39A-221ENST00000593026 ASMTP46597 345 aa13.94□□□□□ -0.18
DDX39A-221ENST00000593026 XKP51811 444 aa13.94□□□□□ -0.18
DDX39A-221ENST00000593026 PGDP52209 483 aa13.94□□□□□ -0.18
DDX39A-221ENST00000593026 EMX2Q04743 252 aa13.94□□□□□ -0.18
DDX39A-221ENST00000593026 LY6DQ14210 128 aa13.94□□□□□ -0.18
DDX39A-221ENST00000593026 SMU1Q2TAY7 513 aa13.94□□□□□ -0.18
DDX39A-221ENST00000593026 VWA5B1Q5TIE3 1220 aa13.94□□□□□ -0.18
DDX39A-221ENST00000593026 IL23RQ5VWK5 629 aa13.94□□□□□ -0.18
DDX39A-221ENST00000593026 RGS9BPQ6ZS82 235 aa13.94□□□□□ -0.18
DDX39A-221ENST00000593026 FAM47EQ6ZV65 393 aa13.94□□□□□ -0.18
DDX39A-221ENST00000593026 TICAM1Q8IUC6 712 aa13.94□□□□□ -0.18
DDX39A-221ENST00000593026 WDR75Q8IWA0 830 aaKnown RBP13.94□□□□□ -0.18
DDX39A-221ENST00000593026 SAMD14Q8IZD0 417 aaPredicted RBP13.94□□□□□ -0.18
DDX39A-221ENST00000593026 LIX1Q8N485 282 aa13.94□□□□□ -0.18
DDX39A-221ENST00000593026 MORN4Q8NDC4 146 aa13.94□□□□□ -0.18
DDX39A-221ENST00000593026 B3GNT7Q8NFL0 401 aa13.94□□□□□ -0.18
DDX39A-221ENST00000593026 CLHC1Q8NHS4 586 aa13.94□□□□□ -0.18
DDX39A-221ENST00000593026 BRIX1Q8TDN6 353 aaKnown RBP13.94□□□□□ -0.18
DDX39A-221ENST00000593026 EXOSC8Q96B26 276 aaKnown RBP13.94□□□□□ -0.18
DDX39A-221ENST00000593026 PPWD1Q96BP3 646 aaKnown RBP13.94□□□□□ -0.18
DDX39A-221ENST00000593026 OR8D2Q9GZM6 311 aa13.94□□□□□ -0.18
DDX39A-221ENST00000593026 ZNF552Q9H707 407 aaPredicted RBP13.94□□□□□ -0.18
DDX39A-221ENST00000593026 GIMAP4Q9NUV9 329 aa13.94□□□□□ -0.18
DDX39A-221ENST00000593026 NOP53Q9NZM5 478 aaKnown RBP13.94□□□□□ -0.18
DDX39A-221ENST00000593026 BAIAP2L1Q9UHR4 511 aa13.94□□□□□ -0.18
DDX39A-221ENST00000593026 PPIEQ9UNP9 301 aaKnown RBP13.94□□□□□ -0.18
DDX39A-221ENST00000593026 EIF3LQ9Y262 564 aaKnown RBP13.94□□□□□ -0.18
DDX39A-221ENST00000593026 CACNA1GO43497 2377 aa13.94□□□□□ -0.18
DDX39A-221ENST00000593026 SDHDO14521 159 aa13.93□□□□□ -0.18
DDX39A-221ENST00000593026 PRPS2P11908 318 aa13.93□□□□□ -0.18
DDX39A-221ENST00000593026 LBPP18428 481 aa13.93□□□□□ -0.18
DDX39A-221ENST00000593026 CSNK2A2P19784 350 aaPredicted RBP13.93□□□□□ -0.18
DDX39A-221ENST00000593026 EPHA3P29320 983 aa13.93□□□□□ -0.18
DDX39A-221ENST00000593026 GALNSP34059 522 aa13.93□□□□□ -0.18
DDX39A-221ENST00000593026 FEN1P39748 380 aaKnown RBP13.93□□□□□ -0.18
DDX39A-221ENST00000593026 ERVK-8P63133 956 aa13.93□□□□□ -0.18
DDX39A-221ENST00000593026 ZNF750Q32MQ0 723 aa13.93□□□□□ -0.18
DDX39A-221ENST00000593026 SOWAHCQ53LP3 525 aaPredicted RBP13.93□□□□□ -0.18
DDX39A-221ENST00000593026 C6orf163Q5TEZ5 329 aa13.93□□□□□ -0.18
DDX39A-221ENST00000593026 AGAP7PQ5VUJ5 663 aa13.93□□□□□ -0.18
DDX39A-221ENST00000593026 TCTN3Q6NUS6 607 aa13.93□□□□□ -0.18
DDX39A-221ENST00000593026 LRRC34Q8IZ02 419 aa13.93□□□□□ -0.18
DDX39A-221ENST00000593026 LRRC25Q8N386 305 aaPredicted RBP13.93□□□□□ -0.18
DDX39A-221ENST00000593026 SIRT6Q8N6T7 355 aa13.93□□□□□ -0.18
DDX39A-221ENST00000593026 APCDD1LQ8NCL9 501 aa13.93□□□□□ -0.18
DDX39A-221ENST00000593026 ELP5Q8TE02 316 aa13.93□□□□□ -0.18
DDX39A-221ENST00000593026 PSMF1Q92530 271 aa13.93□□□□□ -0.18
DDX39A-221ENST00000593026 RIT1Q92963 219 aa13.93□□□□□ -0.18
DDX39A-221ENST00000593026 GFM2Q969S9 779 aaKnown RBP13.93□□□□□ -0.18
DDX39A-221ENST00000593026 NCLNQ969V3 563 aa13.93□□□□□ -0.18
DDX39A-221ENST00000593026 VMP1Q96GC9 406 aa13.93□□□□□ -0.18
DDX39A-221ENST00000593026 ART5Q96L15 291 aa13.93□□□□□ -0.18
DDX39A-221ENST00000593026 AGAP4Q96P64 663 aa13.93□□□□□ -0.18
DDX39A-221ENST00000593026 KCNK13Q9HB14 408 aa13.93□□□□□ -0.18
DDX39A-221ENST00000593026 SLC35C2Q9NQQ7 365 aa13.93□□□□□ -0.18
DDX39A-221ENST00000593026 ASIC5Q9NY37 505 aa13.93□□□□□ -0.18
DDX39A-221ENST00000593026 ENTPD4Q9Y227 616 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms