RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 HMGCS1Q01581 520 aa9.39□□□□□ -0.91
BRCA1-227ENST00000591849 ZNF844Q08AG5 666 aa9.39□□□□□ -0.91
BRCA1-227ENST00000591849 TUBA3CQ13748 450 aa9.39□□□□□ -0.91
BRCA1-227ENST00000591849 ZNF267Q14586 743 aaPredicted RBP9.39□□□□□ -0.91
BRCA1-227ENST00000591849 MAPKAPK3Q16644 382 aa9.39□□□□□ -0.91
BRCA1-227ENST00000591849 SPIN4Q56A73 249 aa9.39□□□□□ -0.91
BRCA1-227ENST00000591849 NDUFAF5Q5TEU4 345 aa9.39□□□□□ -0.91
BRCA1-227ENST00000591849 SPINK14Q6IE38 97 aa9.39□□□□□ -0.91
BRCA1-227ENST00000591849 RPUSD3Q6P087 351 aaKnown RBP9.39□□□□□ -0.91
BRCA1-227ENST00000591849 TUBA3EQ6PEY2 450 aa9.39□□□□□ -0.91
BRCA1-227ENST00000591849 NUDCD3Q8IVD9 361 aa9.39□□□□□ -0.91
BRCA1-227ENST00000591849 HOMEZQ8IX15 550 aa9.39□□□□□ -0.91
BRCA1-227ENST00000591849 BCORP1Q8N888 145 aa9.39□□□□□ -0.91
BRCA1-227ENST00000591849 TMEM178AQ8NBL3 297 aa9.39□□□□□ -0.91
BRCA1-227ENST00000591849 FAM98AQ8NCA5 519 aaKnown RBP9.39□□□□□ -0.91
BRCA1-227ENST00000591849 CDC26Q8NHZ8 85 aa9.39□□□□□ -0.91
BRCA1-227ENST00000591849 SLC2A12Q8TD20 617 aa9.39□□□□□ -0.91
BRCA1-227ENST00000591849 PTPMT1Q8WUK0 201 aaPredicted RBP9.39□□□□□ -0.91
BRCA1-227ENST00000591849 CHTF18Q8WVB6 975 aa9.39□□□□□ -0.91
BRCA1-227ENST00000591849 RIT1Q92963 219 aa9.39□□□□□ -0.91
BRCA1-227ENST00000591849 TRMOQ9BU70 441 aa9.39□□□□□ -0.91
BRCA1-227ENST00000591849 CNPPD1Q9BV87 410 aa9.39□□□□□ -0.91
BRCA1-227ENST00000591849 GATA5Q9BWX5 397 aaPredicted RBP9.39□□□□□ -0.91
BRCA1-227ENST00000591849 ZNF717Q9BY31 904 aaPredicted RBP9.39□□□□□ -0.91
BRCA1-227ENST00000591849 STMN4Q9H169 189 aaPredicted RBP9.39□□□□□ -0.91
BRCA1-227ENST00000591849 LRFN1Q9P244 771 aa9.39□□□□□ -0.91
BRCA1-227ENST00000591849 SLC17A7Q9P2U7 560 aa9.39□□□□□ -0.91
BRCA1-227ENST00000591849 ERVK-11Q9UQG0 969 aa9.39□□□□□ -0.91
BRCA1-227ENST00000591849 TNRC6AQ8NDV7 1962 aaKnown RBP9.39□□□□□ -0.91
BRCA1-227ENST00000591849 C1orf226A1L170 272 aa9.38□□□□□ -0.91
BRCA1-227ENST00000591849 WASHC1A8K0Z3 465 aa9.38□□□□□ -0.91
BRCA1-227ENST00000591849 SLC28A1O00337 649 aa9.38□□□□□ -0.91
BRCA1-227ENST00000591849 CDK2AP1O14519 115 aa9.38□□□□□ -0.91
BRCA1-227ENST00000591849 UBFD1O14562 309 aaKnown RBP9.38□□□□□ -0.91
BRCA1-227ENST00000591849 AZIN1O14977 448 aa9.38□□□□□ -0.91
BRCA1-227ENST00000591849 MAN1A2O60476 641 aa9.38□□□□□ -0.91
BRCA1-227ENST00000591849 CRYABP02511 175 aaKnown RBP9.38□□□□□ -0.91
BRCA1-227ENST00000591849 ANXA4P09525 319 aaPredicted RBP9.38□□□□□ -0.91
BRCA1-227ENST00000591849 SLC35E2P0CK97 266 aa9.38□□□□□ -0.91
BRCA1-227ENST00000591849 CHN1P15882 459 aa9.38□□□□□ -0.91
BRCA1-227ENST00000591849 NT5EP21589 574 aa9.38□□□□□ -0.91
BRCA1-227ENST00000591849 GNLYP22749 145 aa9.38□□□□□ -0.91
BRCA1-227ENST00000591849 HTR6P50406 440 aa9.38□□□□□ -0.91
BRCA1-227ENST00000591849 HLCSP50747 726 aa9.38□□□□□ -0.91
BRCA1-227ENST00000591849 SSR4P51571 173 aa9.38□□□□□ -0.91
BRCA1-227ENST00000591849 TRA2BP62995 288 aaKnown RBP9.38□□□□□ -0.91
BRCA1-227ENST00000591849 TBL3Q12788 808 aaKnown RBP9.38□□□□□ -0.91
BRCA1-227ENST00000591849 PCLAFQ15004 111 aa9.38□□□□□ -0.91
BRCA1-227ENST00000591849 INAQ16352 499 aa9.38□□□□□ -0.91
BRCA1-227ENST00000591849 HLA-DQA1Q5Y7H0 255 aa9.38□□□□□ -0.91
BRCA1-227ENST00000591849 SLC25A25Q6KCM7 469 aa9.38□□□□□ -0.91
BRCA1-227ENST00000591849 LRIG3Q6UXM1 1119 aa9.38□□□□□ -0.91
BRCA1-227ENST00000591849 SLC29A4Q7RTT9 530 aa9.38□□□□□ -0.91
BRCA1-227ENST00000591849 ST13P4Q8IZP2 240 aaPredicted RBP9.38□□□□□ -0.91
BRCA1-227ENST00000591849 APCDD1LQ8NCL9 501 aa9.38□□□□□ -0.91
BRCA1-227ENST00000591849 GRHL3Q8TE85 626 aa9.38□□□□□ -0.91
BRCA1-227ENST00000591849 DOK4Q8TEW6 326 aa9.38□□□□□ -0.91
BRCA1-227ENST00000591849 ASB15Q8WXK1 588 aa9.38□□□□□ -0.91
BRCA1-227ENST00000591849 TM4SF18Q96CE8 201 aa9.38□□□□□ -0.91
BRCA1-227ENST00000591849 APIPQ96GX9 242 aa9.38□□□□□ -0.91
BRCA1-227ENST00000591849 SENP5Q96HI0 755 aaPredicted RBP9.38□□□□□ -0.91
BRCA1-227ENST00000591849 ZIM3Q96PE6 472 aa9.38□□□□□ -0.91
BRCA1-227ENST00000591849 MECRQ9BV79 373 aa9.38□□□□□ -0.91
BRCA1-227ENST00000591849 ACPTQ9BZG2 426 aa9.38□□□□□ -0.91
BRCA1-227ENST00000591849 LIN28AQ9H9Z2 209 aaKnown RBP9.38□□□□□ -0.91
BRCA1-227ENST00000591849 GIMAP4Q9NUV9 329 aa9.38□□□□□ -0.91
BRCA1-227ENST00000591849 OLAHQ9NV23 265 aa9.38□□□□□ -0.91
BRCA1-227ENST00000591849 TEX10Q9NXF1 929 aaPredicted RBP9.38□□□□□ -0.91
BRCA1-227ENST00000591849 MCM8Q9UJA3 840 aa9.38□□□□□ -0.91
BRCA1-227ENST00000591849 YARS2Q9Y2Z4 477 aaKnown RBP9.38□□□□□ -0.91
BRCA1-227ENST00000591849 PCDHA9Q9Y5H5 950 aa9.38□□□□□ -0.91
BRCA1-227ENST00000591849 CLDN16Q9Y5I7 305 aa9.38□□□□□ -0.91
BRCA1-227ENST00000591849 ZNF780BQ9Y6R6 833 aa9.38□□□□□ -0.91
BRCA1-227ENST00000591849 CNTRLQ7Z7A1 2325 aa9.37□□□□□ -0.91
BRCA1-227ENST00000591849 WDR91A4D1P6 747 aa9.37□□□□□ -0.91
BRCA1-227ENST00000591849 A8MVJ9 347 aa9.37□□□□□ -0.91
BRCA1-227ENST00000591849 WWP2O00308 870 aa9.37□□□□□ -0.91
BRCA1-227ENST00000591849 RGS14O43566 566 aa9.37□□□□□ -0.91
BRCA1-227ENST00000591849 NPHS1O60500 1241 aa9.37□□□□□ -0.91
BRCA1-227ENST00000591849 SEC22BO75396 215 aa9.37□□□□□ -0.91
BRCA1-227ENST00000591849 ITGA10O75578 1167 aa9.37□□□□□ -0.91
BRCA1-227ENST00000591849 DDAH2O95865 285 aa9.37□□□□□ -0.91
BRCA1-227ENST00000591849 PORP16435 677 aaPredicted RBP9.37□□□□□ -0.91
BRCA1-227ENST00000591849 CSNK2A2P19784 350 aaPredicted RBP9.37□□□□□ -0.91
BRCA1-227ENST00000591849 FEN1P39748 380 aaKnown RBP9.37□□□□□ -0.91
BRCA1-227ENST00000591849 FOXA1P55317 472 aa9.37□□□□□ -0.91
BRCA1-227ENST00000591849 ERVK-8P63133 956 aa9.37□□□□□ -0.91
BRCA1-227ENST00000591849 RNF4P78317 190 aa9.37□□□□□ -0.91
BRCA1-227ENST00000591849 IGLV3-21P80748 117 aaPredicted RBP9.37□□□□□ -0.91
BRCA1-227ENST00000591849 GALNT1Q10472 559 aaPredicted RBP9.37□□□□□ -0.91
BRCA1-227ENST00000591849 HEPACAMQ14CZ8 416 aa9.37□□□□□ -0.91
BRCA1-227ENST00000591849 NR6A1Q15406 480 aa9.37□□□□□ -0.91
BRCA1-227ENST00000591849 FAM219BQ5XKK7 198 aa9.37□□□□□ -0.91
BRCA1-227ENST00000591849 CLEC6AQ6EIG7 209 aa9.37□□□□□ -0.91
BRCA1-227ENST00000591849 RNF111Q6ZNA4 994 aa9.37□□□□□ -0.91
BRCA1-227ENST00000591849 GALNT12Q8IXK2 581 aa9.37□□□□□ -0.91
BRCA1-227ENST00000591849 DDIASQ8IXT1 998 aa9.37□□□□□ -0.91
BRCA1-227ENST00000591849 DNAJB8Q8NHS0 232 aa9.37□□□□□ -0.91
BRCA1-227ENST00000591849 PRR7Q8TB68 274 aa9.37□□□□□ -0.91
BRCA1-227ENST00000591849 FAR1Q8WVX9 515 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms