RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 MRPS30Q9NP92 439 aaKnown RBP3.21□□□□□ -1.9
VMP1-212ENST00000591782 IL26Q9NPH9 171 aa3.21□□□□□ -1.9
VMP1-212ENST00000591782 CHRAC1Q9NRG0 131 aa3.21□□□□□ -1.9
VMP1-212ENST00000591782 TXLNGQ9NUQ3 528 aa3.21□□□□□ -1.9
VMP1-212ENST00000591782 GIMAP4Q9NUV9 329 aa3.21□□□□□ -1.9
VMP1-212ENST00000591782 FAM118AQ9NWS6 357 aa3.21□□□□□ -1.9
VMP1-212ENST00000591782 KLHL28Q9NXS3 571 aa3.21□□□□□ -1.9
VMP1-212ENST00000591782 MRPL15Q9P015 296 aaKnown RBP3.21□□□□□ -1.9
VMP1-212ENST00000591782 PSMC3IPQ9P2W1 217 aaPredicted RBP3.21□□□□□ -1.9
VMP1-212ENST00000591782 RHCGQ9UBD6 479 aa3.21□□□□□ -1.9
VMP1-212ENST00000591782 TRPC4Q9UBN4 977 aa3.21□□□□□ -1.9
VMP1-212ENST00000591782 MAN1B1Q9UKM7 699 aa3.21□□□□□ -1.9
VMP1-212ENST00000591782 ITGA11Q9UKX5 1188 aa3.21□□□□□ -1.9
VMP1-212ENST00000591782 CDH9Q9ULB4 789 aa3.21□□□□□ -1.9
VMP1-212ENST00000591782 ARL2BPQ9Y2Y0 163 aa3.21□□□□□ -1.9
VMP1-212ENST00000591782 IFT52Q9Y366 437 aa3.21□□□□□ -1.9
VMP1-212ENST00000591782 NAALAD2Q9Y3Q0 740 aa3.21□□□□□ -1.9
VMP1-212ENST00000591782 SPIN1Q9Y657 262 aaPredicted RBP3.21□□□□□ -1.9
VMP1-212ENST00000591782 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.21□□□□□ -1.9
VMP1-212ENST00000591782 SMARCA4P51532 1647 aa3.21□□□□□ -1.9
VMP1-212ENST00000591782 INSRP06213 1382 aa3.21□□□□□ -1.9
VMP1-212ENST00000591782 ABCC11Q96J66 1382 aa3.21□□□□□ -1.9
VMP1-212ENST00000591782 RAB3GAP2Q9H2M9 1393 aa3.21□□□□□ -1.9
VMP1-212ENST00000591782 ASTN2O75129 1339 aaPredicted RBP3.2□□□□□ -1.9
VMP1-212ENST00000591782 PASKQ96RG2 1323 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 PCDH11XQ9BZA7 1347 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 PCDH11YQ9BZA8 1340 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 KIF26BQ2KJY2 2108 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 PTPRTO14522 1441 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 SETD5Q9C0A6 1442 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 PRDM15P57071 1507 aaPredicted RBP3.2□□□□□ -1.9
VMP1-212ENST00000591782 A0A075B6Q4 140 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 LOC102723996A0A087X1L8 192 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 A0A0U1RQK1 487 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 ZNF320A2RRD8 509 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 FAM149AA5PLN7 773 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 SMIM23A6NLE4 172 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 MAGEB17A8MXT2 336 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 FAM25AB3EWG3 89 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 FAM25CB3EWG5 89 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 FAM25GB3EWG6 89 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 KBTBD13C9JR72 458 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 DNM1LO00429 736 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 DNALI1O14645 258 aaPredicted RBP3.2□□□□□ -1.9
VMP1-212ENST00000591782 SLC9A3R1O14745 358 aaPredicted RBP3.2□□□□□ -1.9
VMP1-212ENST00000591782 POLR1CO15160 346 aaPredicted RBP3.2□□□□□ -1.9
VMP1-212ENST00000591782 AKR7A2O43488 359 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 SSX4O60224 188 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 SERPINB7O75635 380 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 CIAO1O76071 339 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 RHOBTB1O94844 696 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 SEMA3DO95025 777 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 CCNB2O95067 398 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 ANP32DO95626 131 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 ATP6V1G2O95670 118 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 BCL10O95999 233 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 NR3C1P04150 777 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 PRSS1P07477 247 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 FGF4P08620 206 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 ANXA5P08758 320 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 TPBGLP0DKB5 382 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 SAGP10523 405 aaPredicted RBP3.2□□□□□ -1.9
VMP1-212ENST00000591782 FGF5P12034 268 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 MLNP12872 115 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 FOSL2P15408 326 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 GNSP15586 552 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 HOXB8P17481 243 aaPredicted RBP3.2□□□□□ -1.9
VMP1-212ENST00000591782 TCP1P17987 556 aaKnown RBP3.2□□□□□ -1.9
VMP1-212ENST00000591782 CCNA2P20248 432 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 ATP6V1C1P21283 382 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 CD1BP29016 333 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 GNA11P29992 359 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 CASP14P31944 242 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 GTF2H1P32780 548 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 CYLC1P35663 651 aaPredicted RBP3.2□□□□□ -1.9
VMP1-212ENST00000591782 WNT5AP41221 380 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 ALDH3B1P43353 468 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 DHPSP49366 369 aaPredicted RBP3.2□□□□□ -1.9
VMP1-212ENST00000591782 EIF2B2P49770 351 aaKnown RBP3.2□□□□□ -1.9
VMP1-212ENST00000591782 LUMP51884 338 aaPredicted RBP3.2□□□□□ -1.9
VMP1-212ENST00000591782 CCNG1P51959 295 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 MFAP3P55082 362 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 NLRP11P59045 1033 aaKnown RBP3.2□□□□□ -1.9
VMP1-212ENST00000591782 EIF3EP60228 445 aaKnown RBP3.2□□□□□ -1.9
VMP1-212ENST00000591782 SIRPAP78324 504 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 TEFQ10587 303 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 HYAL1Q12794 435 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 PNRC1Q12796 327 aaPredicted RBP3.2□□□□□ -1.9
VMP1-212ENST00000591782 DMP1Q13316 513 aaPredicted RBP3.2□□□□□ -1.9
VMP1-212ENST00000591782 MFAP5Q13361 173 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 XRCC4Q13426 336 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 IL18Q14116 193 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 SSX2Q16385 188 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 MCMDC2Q4G0Z9 681 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 LBHQ53QV2 105 aaPredicted RBP3.2□□□□□ -1.9
VMP1-212ENST00000591782 HERC4Q5GLZ8 1057 aaPredicted RBP3.2□□□□□ -1.9
VMP1-212ENST00000591782 TCP11X2Q5H9J9 407 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 PRAMEF20Q5VT98 475 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 ARHGEF16Q5VV41 709 aa3.2□□□□□ -1.9
VMP1-212ENST00000591782 CES4AQ5XG92 561 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms