RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 ART5Q96L15 291 aa20.08■□□□□ 0.81
DDX39A-215ENST00000590696 MTERF1Q99551 399 aaKnown RBP20.08■□□□□ 0.81
DDX39A-215ENST00000590696 ZNF559Q9BR84 538 aa20.08■□□□□ 0.81
DDX39A-215ENST00000590696 CENPKQ9BS16 269 aa20.08■□□□□ 0.81
DDX39A-215ENST00000590696 PHF11Q9UIL8 331 aa20.08■□□□□ 0.81
DDX39A-215ENST00000590696 PYCARDQ9ULZ3 195 aa20.08■□□□□ 0.81
DDX39A-215ENST00000590696 ANGPTL3Q9Y5C1 460 aa20.08■□□□□ 0.81
DDX39A-215ENST00000590696 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.08■□□□□ 0.81
DDX39A-215ENST00000590696 HIVEP1P15822 2718 aa20.08■□□□□ 0.8
DDX39A-215ENST00000590696 PLPP1O14494 284 aa20.07■□□□□ 0.8
DDX39A-215ENST00000590696 PRKRAO75569 313 aaKnown RBP20.07■□□□□ 0.8
DDX39A-215ENST00000590696 NADKO95544 446 aaPredicted RBP20.07■□□□□ 0.8
DDX39A-215ENST00000590696 MTHFD2P13995 350 aa20.07■□□□□ 0.8
DDX39A-215ENST00000590696 ALOX15P16050 662 aaPredicted RBP20.07■□□□□ 0.8
DDX39A-215ENST00000590696 TLX1P31314 330 aaPredicted RBP20.07■□□□□ 0.8
DDX39A-215ENST00000590696 PIK3CBP42338 1070 aa20.07■□□□□ 0.8
DDX39A-215ENST00000590696 MAGEA4P43358 317 aa20.07■□□□□ 0.8
DDX39A-215ENST00000590696 ZFP36L2P47974 494 aaKnown RBP20.07■□□□□ 0.8
DDX39A-215ENST00000590696 HNRNPH2P55795 449 aaKnown RBP20.07■□□□□ 0.8
DDX39A-215ENST00000590696 WLSQ5T9L3 541 aa20.07■□□□□ 0.8
DDX39A-215ENST00000590696 ADGRD1Q6QNK2 874 aa20.07■□□□□ 0.8
DDX39A-215ENST00000590696 LYPD8Q6UX82 237 aa20.07■□□□□ 0.8
DDX39A-215ENST00000590696 SPNS3Q6ZMD2 512 aa20.07■□□□□ 0.8
DDX39A-215ENST00000590696 ZCCHC7Q8N3Z6 543 aaKnown RBP20.07■□□□□ 0.8
DDX39A-215ENST00000590696 SLC15A4Q8N697 577 aa20.07■□□□□ 0.8
DDX39A-215ENST00000590696 PAQR8Q8TEZ7 354 aa20.07■□□□□ 0.8
DDX39A-215ENST00000590696 SARAFQ96BY9 339 aa20.07■□□□□ 0.8
DDX39A-215ENST00000590696 FBXL20Q96IG2 436 aa20.07■□□□□ 0.8
DDX39A-215ENST00000590696 EXO5Q9H790 373 aa20.07■□□□□ 0.8
DDX39A-215ENST00000590696 SH2D2AQ9NP31 389 aa20.07■□□□□ 0.8
DDX39A-215ENST00000590696 DMRT3Q9NQL9 472 aa20.07■□□□□ 0.8
DDX39A-215ENST00000590696 ACOT9Q9Y305 439 aa20.07■□□□□ 0.8
DDX39A-215ENST00000590696 TRGV5A0A0B4J1U4 118 aa20.06■□□□□ 0.8
DDX39A-215ENST00000590696 A0A0G2JNJ9 132 aa20.06■□□□□ 0.8
DDX39A-215ENST00000590696 KLK8O60259 260 aa20.06■□□□□ 0.8
DDX39A-215ENST00000590696 HCN1O60741 890 aa20.06■□□□□ 0.8
DDX39A-215ENST00000590696 WDR1O75083 606 aa20.06■□□□□ 0.8
DDX39A-215ENST00000590696 ANKRD17O75179 2603 aaKnown RBP20.06■□□□□ 0.8
DDX39A-215ENST00000590696 STX2P32856 288 aa20.06■□□□□ 0.8
DDX39A-215ENST00000590696 RPS13P62277 151 aaKnown RBP20.06■□□□□ 0.8
DDX39A-215ENST00000590696 PRAMEF20Q5VT98 475 aa20.06■□□□□ 0.8
DDX39A-215ENST00000590696 LIPJQ5W064 366 aa20.06■□□□□ 0.8
DDX39A-215ENST00000590696 ST13P4Q8IZP2 240 aaPredicted RBP20.06■□□□□ 0.8
DDX39A-215ENST00000590696 CLYBLQ8N0X4 340 aa20.06■□□□□ 0.8
DDX39A-215ENST00000590696 FBXO25Q8TCJ0 367 aa20.06■□□□□ 0.8
DDX39A-215ENST00000590696 KCTD4Q8WVF5 259 aa20.06■□□□□ 0.8
DDX39A-215ENST00000590696 SPACA9Q96E40 222 aaPredicted RBP20.06■□□□□ 0.8
DDX39A-215ENST00000590696 CNPPD1Q9BV87 410 aa20.06■□□□□ 0.8
DDX39A-215ENST00000590696 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.06■□□□□ 0.8
DDX39A-215ENST00000590696 ALKBH4Q9NXW9 302 aa20.06■□□□□ 0.8
DDX39A-215ENST00000590696 Q9UFV3 132 aa20.06■□□□□ 0.8
DDX39A-215ENST00000590696 KCNN3Q9UGI6 736 aa20.06■□□□□ 0.8
DDX39A-215ENST00000590696 UTP11Q9Y3A2 253 aaKnown RBP20.06■□□□□ 0.8
DDX39A-215ENST00000590696 PCDHGA11Q9Y5H2 935 aa20.06■□□□□ 0.8
DDX39A-215ENST00000590696 INTS1Q8N201 2190 aaKnown RBP20.05■□□□□ 0.8
DDX39A-215ENST00000590696 IQANK1A0A1B0GTG1 560 aa20.05■□□□□ 0.8
DDX39A-215ENST00000590696 WASHC1A8K0Z3 465 aa20.05■□□□□ 0.8
DDX39A-215ENST00000590696 SYCE1LA8MT33 242 aa20.05■□□□□ 0.8
DDX39A-215ENST00000590696 PROM1O43490 865 aa20.05■□□□□ 0.8
DDX39A-215ENST00000590696 RFPL3SP0C7P2 107 aa20.05■□□□□ 0.8
DDX39A-215ENST00000590696 PTX3P26022 381 aaPredicted RBP20.05■□□□□ 0.8
DDX39A-215ENST00000590696 BUD31P41223 144 aaPredicted RBP20.05■□□□□ 0.8
DDX39A-215ENST00000590696 HERVK_113P63132 956 aa20.05■□□□□ 0.8
DDX39A-215ENST00000590696 ERVK-8P63133 956 aa20.05■□□□□ 0.8
DDX39A-215ENST00000590696 KCNJ2P63252 427 aa20.05■□□□□ 0.8
DDX39A-215ENST00000590696 IRF9Q00978 393 aa20.05■□□□□ 0.8
DDX39A-215ENST00000590696 CAV1Q03135 178 aa20.05■□□□□ 0.8
DDX39A-215ENST00000590696 NAB1Q13506 487 aa20.05■□□□□ 0.8
DDX39A-215ENST00000590696 C1orf185Q5T7R7 199 aa20.05■□□□□ 0.8
DDX39A-215ENST00000590696 CES4AQ5XG92 561 aa20.05■□□□□ 0.8
DDX39A-215ENST00000590696 SLC29A4Q7RTT9 530 aa20.05■□□□□ 0.8
DDX39A-215ENST00000590696 TMEM200AQ86VY9 491 aa20.05■□□□□ 0.8
DDX39A-215ENST00000590696 CENPLQ8N0S6 344 aaPredicted RBP20.05■□□□□ 0.8
DDX39A-215ENST00000590696 FAM13CQ8NE31 585 aa20.05■□□□□ 0.8
DDX39A-215ENST00000590696 RHEBL1Q8TAI7 183 aa20.05■□□□□ 0.8
DDX39A-215ENST00000590696 GAL3ST4Q96RP7 486 aa20.05■□□□□ 0.8
DDX39A-215ENST00000590696 ERVK-6Q9BXR3 956 aa20.05■□□□□ 0.8
DDX39A-215ENST00000590696 ACTR8Q9H981 624 aa20.05■□□□□ 0.8
DDX39A-215ENST00000590696 SPRR3Q9UBC9 169 aa20.05■□□□□ 0.8
DDX39A-215ENST00000590696 ERVK-19Q9WJR5 959 aa20.05■□□□□ 0.8
DDX39A-215ENST00000590696 TSC22D4Q9Y3Q8 395 aa20.05■□□□□ 0.8
DDX39A-215ENST00000590696 LRRC14BA6NHZ5 514 aa20.04■□□□□ 0.8
DDX39A-215ENST00000590696 OR10H2O60403 315 aa20.04■□□□□ 0.8
DDX39A-215ENST00000590696 EEDO75530 441 aaKnown RBP20.04■□□□□ 0.8
DDX39A-215ENST00000590696 GPR75O95800 540 aa20.04■□□□□ 0.8
DDX39A-215ENST00000590696 GFAPP14136 432 aa20.04■□□□□ 0.8
DDX39A-215ENST00000590696 ENDOUP21128 410 aaKnown RBP20.04■□□□□ 0.8
DDX39A-215ENST00000590696 ADH7P40394 386 aa20.04■□□□□ 0.8
DDX39A-215ENST00000590696 ARFIP1P53367 373 aa20.04■□□□□ 0.8
DDX39A-215ENST00000590696 PHEXP78562 749 aa20.04■□□□□ 0.8
DDX39A-215ENST00000590696 TBL3Q12788 808 aaKnown RBP20.04■□□□□ 0.8
DDX39A-215ENST00000590696 MYBPHQ13203 477 aa20.04■□□□□ 0.8
DDX39A-215ENST00000590696 ZNF267Q14586 743 aaPredicted RBP20.04■□□□□ 0.8
DDX39A-215ENST00000590696 SETDB1Q15047 1291 aa20.04■□□□□ 0.8
DDX39A-215ENST00000590696 TRADDQ15628 312 aa20.04■□□□□ 0.8
DDX39A-215ENST00000590696 PFKFB4Q16877 469 aa20.04■□□□□ 0.8
DDX39A-215ENST00000590696 SPRED3Q2MJR0 410 aa20.04■□□□□ 0.8
DDX39A-215ENST00000590696 RNF111Q6ZNA4 994 aa20.04■□□□□ 0.8
DDX39A-215ENST00000590696 LIX1LQ8IVB5 337 aa20.04■□□□□ 0.8
DDX39A-215ENST00000590696 FBXW8Q8N3Y1 598 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms