RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 MED13Q9UHV7 2174 aa20.1■□□□□ 0.81
R3HDM4-206ENST00000590454 GNG14A0A1W2PPG7 69 aa20.1■□□□□ 0.81
R3HDM4-206ENST00000590454 A0A1W2PS29 197 aa20.1■□□□□ 0.81
R3HDM4-206ENST00000590454 FGF17O60258 216 aa20.1■□□□□ 0.81
R3HDM4-206ENST00000590454 CEACAM4O75871 244 aa20.1■□□□□ 0.81
R3HDM4-206ENST00000590454 IGHEP01854 428 aa20.1■□□□□ 0.81
R3HDM4-206ENST00000590454 ANXA4P09525 319 aaPredicted RBP20.1■□□□□ 0.81
R3HDM4-206ENST00000590454 NR2F6P10588 404 aa20.1■□□□□ 0.81
R3HDM4-206ENST00000590454 TACR1P25103 407 aa20.1■□□□□ 0.81
R3HDM4-206ENST00000590454 HK2P52789 917 aa20.1■□□□□ 0.81
R3HDM4-206ENST00000590454 TAS2R50P59544 299 aa20.1■□□□□ 0.81
R3HDM4-206ENST00000590454 RPL38P63173 70 aaKnown RBP20.1■□□□□ 0.81
R3HDM4-206ENST00000590454 SLC13A2Q13183 592 aa20.1■□□□□ 0.81
R3HDM4-206ENST00000590454 NDUFAF5Q5TEU4 345 aa20.1■□□□□ 0.81
R3HDM4-206ENST00000590454 VWA5B1Q5TIE3 1220 aa20.1■□□□□ 0.81
R3HDM4-206ENST00000590454 FAM47EQ6ZV65 393 aa20.1■□□□□ 0.81
R3HDM4-206ENST00000590454 PNPLA2Q96AD5 504 aa20.1■□□□□ 0.81
R3HDM4-206ENST00000590454 FCRL1Q96LA6 429 aa20.1■□□□□ 0.81
R3HDM4-206ENST00000590454 MFRPQ9BY79 579 aa20.1■□□□□ 0.81
R3HDM4-206ENST00000590454 RPF2Q9H7B2 306 aaKnown RBP20.1■□□□□ 0.81
R3HDM4-206ENST00000590454 MS4A12Q9NXJ0 267 aa20.1■□□□□ 0.81
R3HDM4-206ENST00000590454 HEY2Q9UBP5 337 aa20.1■□□□□ 0.81
R3HDM4-206ENST00000590454 SHANK1Q9Y566 2161 aa20.1■□□□□ 0.81
R3HDM4-206ENST00000590454 LOC102723996A0A087X1L8 192 aa20.09■□□□□ 0.81
R3HDM4-206ENST00000590454 CTNSO60931 367 aa20.09■□□□□ 0.81
R3HDM4-206ENST00000590454 IL3P08700 152 aa20.09■□□□□ 0.81
R3HDM4-206ENST00000590454 COX6A1P12074 109 aa20.09■□□□□ 0.81
R3HDM4-206ENST00000590454 ACPPP15309 386 aa20.09■□□□□ 0.81
R3HDM4-206ENST00000590454 HSD17B7P56937 341 aa20.09■□□□□ 0.81
R3HDM4-206ENST00000590454 GUCY1A3Q02108 690 aa20.09■□□□□ 0.81
R3HDM4-206ENST00000590454 PCOLCEQ15113 449 aa20.09■□□□□ 0.81
R3HDM4-206ENST00000590454 C6orf136Q5SQH8 315 aa20.09■□□□□ 0.81
R3HDM4-206ENST00000590454 METTL21AQ8WXB1 218 aa20.09■□□□□ 0.81
R3HDM4-206ENST00000590454 TUBGCP3Q96CW5 907 aa20.09■□□□□ 0.81
R3HDM4-206ENST00000590454 C7orf26Q96N11 449 aa20.09■□□□□ 0.81
R3HDM4-206ENST00000590454 WDR77Q9BQA1 342 aaPredicted RBP20.09■□□□□ 0.81
R3HDM4-206ENST00000590454 AKTIPQ9H8T0 292 aa20.09■□□□□ 0.81
R3HDM4-206ENST00000590454 C5AR2Q9P296 337 aa20.09■□□□□ 0.81
R3HDM4-206ENST00000590454 SLC5A6Q9Y289 635 aa20.09■□□□□ 0.81
R3HDM4-206ENST00000590454 MRPS33Q9Y291 106 aaKnown RBP20.09■□□□□ 0.81
R3HDM4-206ENST00000590454 MMACHCQ9Y4U1 282 aa20.09■□□□□ 0.81
R3HDM4-206ENST00000590454 SPACA6W5XKT8 324 aa20.09■□□□□ 0.81
R3HDM4-206ENST00000590454 ITPR2Q14571 2701 aa20.08■□□□□ 0.81
R3HDM4-206ENST00000590454 RP1L1Q8IWN7 2480 aaPredicted RBP20.08■□□□□ 0.81
R3HDM4-206ENST00000590454 TCRBV16S1A1N1A0A5B0 115 aa20.08■□□□□ 0.81
R3HDM4-206ENST00000590454 A8MUA0 341 aa20.08■□□□□ 0.81
R3HDM4-206ENST00000590454 CLDN4O14493 209 aa20.08■□□□□ 0.81
R3HDM4-206ENST00000590454 ZNF195O14628 629 aa20.08■□□□□ 0.81
R3HDM4-206ENST00000590454 BUD31P41223 144 aaPredicted RBP20.08■□□□□ 0.81
R3HDM4-206ENST00000590454 SFT2D3Q587I9 215 aa20.08■□□□□ 0.81
R3HDM4-206ENST00000590454 SLC6A19Q695T7 634 aa20.08■□□□□ 0.81
R3HDM4-206ENST00000590454 CPEB2Q7Z5Q1 589 aaKnown RBP20.08■□□□□ 0.81
R3HDM4-206ENST00000590454 ARFGAP2Q8N6H7 521 aa20.08■□□□□ 0.81
R3HDM4-206ENST00000590454 FDCSPQ8NFU4 85 aa20.08■□□□□ 0.81
R3HDM4-206ENST00000590454 CDC26Q8NHZ8 85 aa20.08■□□□□ 0.81
R3HDM4-206ENST00000590454 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.08■□□□□ 0.81
R3HDM4-206ENST00000590454 EGLN2Q96KS0 407 aa20.08■□□□□ 0.81
R3HDM4-206ENST00000590454 PPP3R2Q96LZ3 170 aa20.08■□□□□ 0.81
R3HDM4-206ENST00000590454 C5orf34Q96MH7 638 aa20.08■□□□□ 0.81
R3HDM4-206ENST00000590454 C1orf50Q9BV19 199 aa20.08■□□□□ 0.81
R3HDM4-206ENST00000590454 MEAF6Q9HAF1 191 aa20.08■□□□□ 0.81
R3HDM4-206ENST00000590454 BAIAP2L1Q9UHR4 511 aa20.08■□□□□ 0.81
R3HDM4-206ENST00000590454 EXO1Q9UQ84 846 aaKnown RBP20.08■□□□□ 0.81
R3HDM4-206ENST00000590454 PCDHA9Q9Y5H5 950 aa20.08■□□□□ 0.81
R3HDM4-206ENST00000590454 IGHV1-45A0A0A0MS14 117 aa20.07■□□□□ 0.8
R3HDM4-206ENST00000590454 SDHDO14521 159 aa20.07■□□□□ 0.8
R3HDM4-206ENST00000590454 HDAC3O15379 428 aa20.07■□□□□ 0.8
R3HDM4-206ENST00000590454 SEC24DO94855 1032 aaPredicted RBP20.07■□□□□ 0.8
R3HDM4-206ENST00000590454 CELA2AP08217 269 aa20.07■□□□□ 0.8
R3HDM4-206ENST00000590454 CYC1P08574 325 aa20.07■□□□□ 0.8
R3HDM4-206ENST00000590454 SDC1P18827 310 aa20.07■□□□□ 0.8
R3HDM4-206ENST00000590454 ELAVL4P26378 380 aaKnown RBP20.07■□□□□ 0.8
R3HDM4-206ENST00000590454 TRA2BP62995 288 aaKnown RBP20.07■□□□□ 0.8
R3HDM4-206ENST00000590454 FOLH1Q04609 750 aa20.07■□□□□ 0.8
R3HDM4-206ENST00000590454 Q0VFX4 171 aa20.07■□□□□ 0.8
R3HDM4-206ENST00000590454 PRSS53Q2L4Q9 553 aa20.07■□□□□ 0.8
R3HDM4-206ENST00000590454 ZNF750Q32MQ0 723 aa20.07■□□□□ 0.8
R3HDM4-206ENST00000590454 C1QL3Q5VWW1 255 aa20.07■□□□□ 0.8
R3HDM4-206ENST00000590454 FAM180BQ6P0A1 224 aa20.07■□□□□ 0.8
R3HDM4-206ENST00000590454 RGS9BPQ6ZS82 235 aa20.07■□□□□ 0.8
R3HDM4-206ENST00000590454 CRLF3Q8IUI8 442 aa20.07■□□□□ 0.8
R3HDM4-206ENST00000590454 RBMXL3Q8N7X1 1067 aaKnown RBP20.07■□□□□ 0.8
R3HDM4-206ENST00000590454 FAM76AQ8TAV0 307 aa20.07■□□□□ 0.8
R3HDM4-206ENST00000590454 DNAJB14Q8TBM8 379 aa20.07■□□□□ 0.8
R3HDM4-206ENST00000590454 CCT7Q99832 543 aa20.07■□□□□ 0.8
R3HDM4-206ENST00000590454 ZNF700Q9H0M5 742 aa20.07■□□□□ 0.8
R3HDM4-206ENST00000590454 WDR55Q9H6Y2 383 aaPredicted RBP20.07■□□□□ 0.8
R3HDM4-206ENST00000590454 ZNF160Q9HCG1 818 aa20.07■□□□□ 0.8
R3HDM4-206ENST00000590454 RIC8BQ9NVN3 520 aa20.07■□□□□ 0.8
R3HDM4-206ENST00000590454 CES1P1Q9UKY3 287 aa20.07■□□□□ 0.8
R3HDM4-206ENST00000590454 GOLGA8QA0A0J9YX86 632 aa20.06■□□□□ 0.8
R3HDM4-206ENST00000590454 A0A1W2PQ72 361 aa20.06■□□□□ 0.8
R3HDM4-206ENST00000590454 GOLGA8OA6NCC3 632 aa20.06■□□□□ 0.8
R3HDM4-206ENST00000590454 GOLGA8NF8WBI6 632 aa20.06■□□□□ 0.8
R3HDM4-206ENST00000590454 PEX12O00623 359 aa20.06■□□□□ 0.8
R3HDM4-206ENST00000590454 CBX6O95503 412 aa20.06■□□□□ 0.8
R3HDM4-206ENST00000590454 PRR35P0CG20 571 aa20.06■□□□□ 0.8
R3HDM4-206ENST00000590454 TLX1P31314 330 aaPredicted RBP20.06■□□□□ 0.8
R3HDM4-206ENST00000590454 ALDH9A1P49189 494 aa20.06■□□□□ 0.8
R3HDM4-206ENST00000590454 OR4D2P58180 307 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms