RNA–Protein interactions for RNA: ENST00000589445.1

R3HDM4-205, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 705 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-205ENST00000589445 APOBEC4Q8WW27 367 aaKnown RBP21.01■□□□□ 0.95
R3HDM4-205ENST00000589445 TUBB6Q9BUF5 446 aa21.01■□□□□ 0.95
R3HDM4-205ENST00000589445 ING2Q9H160 280 aa21.01■□□□□ 0.95
R3HDM4-205ENST00000589445 GIMAP4Q9NUV9 329 aa21.01■□□□□ 0.95
R3HDM4-205ENST00000589445 FGFR1OP2Q9NVK5 253 aa21.01■□□□□ 0.95
R3HDM4-205ENST00000589445 CLDN16Q9Y5I7 305 aa21.01■□□□□ 0.95
R3HDM4-205ENST00000589445 ZNF780BQ9Y6R6 833 aa21.01■□□□□ 0.95
R3HDM4-205ENST00000589445 SYNDIG1LA6NDD5 238 aa21■□□□□ 0.95
R3HDM4-205ENST00000589445 SAGE2PA6NJ88 616 aa21■□□□□ 0.95
R3HDM4-205ENST00000589445 POLR3GO15318 223 aaPredicted RBP21■□□□□ 0.95
R3HDM4-205ENST00000589445 PRR35P0CG20 571 aa21■□□□□ 0.95
R3HDM4-205ENST00000589445 DDCP20711 480 aa21■□□□□ 0.95
R3HDM4-205ENST00000589445 ITGA3P26006 1051 aa21■□□□□ 0.95
R3HDM4-205ENST00000589445 PGDP52209 483 aa21■□□□□ 0.95
R3HDM4-205ENST00000589445 GYS2P54840 703 aa21■□□□□ 0.95
R3HDM4-205ENST00000589445 AQP5P55064 265 aa21■□□□□ 0.95
R3HDM4-205ENST00000589445 EMX2Q04743 252 aa21■□□□□ 0.95
R3HDM4-205ENST00000589445 RAPSNQ13702 412 aa21■□□□□ 0.95
R3HDM4-205ENST00000589445 ELAVL1Q15717 326 aaKnown RBP21■□□□□ 0.95
R3HDM4-205ENST00000589445 TBR1Q16650 682 aa21■□□□□ 0.95
R3HDM4-205ENST00000589445 BTBD16Q32M84 506 aa21■□□□□ 0.95
R3HDM4-205ENST00000589445 C6orf163Q5TEZ5 329 aa21■□□□□ 0.95
R3HDM4-205ENST00000589445 ANKRD26P1Q6NSI1 321 aa21■□□□□ 0.95
R3HDM4-205ENST00000589445 TICAM1Q8IUC6 712 aa21■□□□□ 0.95
R3HDM4-205ENST00000589445 PARP9Q8IXQ6 854 aa21■□□□□ 0.95
R3HDM4-205ENST00000589445 MARK4Q96L34 752 aa21■□□□□ 0.95
R3HDM4-205ENST00000589445 WDR77Q9BQA1 342 aaPredicted RBP21■□□□□ 0.95
R3HDM4-205ENST00000589445 ARHGAP9Q9BRR9 750 aa21■□□□□ 0.95
R3HDM4-205ENST00000589445 TRIM55Q9BYV6 548 aa21■□□□□ 0.95
R3HDM4-205ENST00000589445 PSME2Q9UL46 239 aa21■□□□□ 0.95
R3HDM4-205ENST00000589445 A6NL46 340 aa20.99■□□□□ 0.95
R3HDM4-205ENST00000589445 CELA2AP08217 269 aa20.99■□□□□ 0.95
R3HDM4-205ENST00000589445 G6PDP11413 515 aa20.99■□□□□ 0.95
R3HDM4-205ENST00000589445 PRPS2P11908 318 aa20.99■□□□□ 0.95
R3HDM4-205ENST00000589445 FEN1P39748 380 aaKnown RBP20.99■□□□□ 0.95
R3HDM4-205ENST00000589445 STT3AP46977 705 aa20.99■□□□□ 0.95
R3HDM4-205ENST00000589445 IGLV3-21P80748 117 aaPredicted RBP20.99■□□□□ 0.95
R3HDM4-205ENST00000589445 AIMP2Q13155 320 aaKnown RBP20.99■□□□□ 0.95
R3HDM4-205ENST00000589445 ZNF750Q32MQ0 723 aa20.99■□□□□ 0.95
R3HDM4-205ENST00000589445 IRAK1BP1Q5VVH5 260 aa20.99■□□□□ 0.95
R3HDM4-205ENST00000589445 PPWD1Q96BP3 646 aaKnown RBP20.99■□□□□ 0.95
R3HDM4-205ENST00000589445 PPCDCQ96CD2 204 aa20.99■□□□□ 0.95
R3HDM4-205ENST00000589445 OR52B2Q96RD2 323 aa20.99■□□□□ 0.95
R3HDM4-205ENST00000589445 PELOQ9BRX2 385 aaKnown RBP20.99■□□□□ 0.95
R3HDM4-205ENST00000589445 CCDC134Q9H6E4 229 aa20.99■□□□□ 0.95
R3HDM4-205ENST00000589445 ATP13A2Q9NQ11 1180 aa20.99■□□□□ 0.95
R3HDM4-205ENST00000589445 DCTN4Q9UJW0 460 aa20.99■□□□□ 0.95
R3HDM4-205ENST00000589445 CLCA3PQ9Y6N3 262 aa20.99■□□□□ 0.95
R3HDM4-205ENST00000589445 MGAQ8IWI9 3026 aa20.99■□□□□ 0.95
R3HDM4-205ENST00000589445 MED13Q9UHV7 2174 aa20.98■□□□□ 0.95
R3HDM4-205ENST00000589445 A0A1W2PQ72 361 aa20.98■□□□□ 0.95
R3HDM4-205ENST00000589445 C17orf105B2RV13 164 aa20.98■□□□□ 0.95
R3HDM4-205ENST00000589445 ZNF195O14628 629 aa20.98■□□□□ 0.95
R3HDM4-205ENST00000589445 DYRK3O43781 588 aa20.98■□□□□ 0.95
R3HDM4-205ENST00000589445 TROVE2P10155 538 aaKnown RBP eCLIP20.98■□□□□ 0.95
R3HDM4-205ENST00000589445 CPMP14384 443 aa20.98■□□□□ 0.95
R3HDM4-205ENST00000589445 NT5EP21589 574 aa20.98■□□□□ 0.95
R3HDM4-205ENST00000589445 PTGER1P34995 402 aa20.98■□□□□ 0.95
R3HDM4-205ENST00000589445 CCL11P51671 97 aa20.98■□□□□ 0.95
R3HDM4-205ENST00000589445 XKP51811 444 aa20.98■□□□□ 0.95
R3HDM4-205ENST00000589445 DIO3P55073 304 aa20.98■□□□□ 0.95
R3HDM4-205ENST00000589445 SLC26A5P58743 744 aa20.98■□□□□ 0.95
R3HDM4-205ENST00000589445 SMU1Q2TAY7 513 aa20.98■□□□□ 0.95
R3HDM4-205ENST00000589445 EPGNQ6UW88 154 aa20.98■□□□□ 0.95
R3HDM4-205ENST00000589445 LARP4Q71RC2 724 aaKnown RBP eCLIP20.98■□□□□ 0.957e-6■□□□□ 9
R3HDM4-205ENST00000589445 KBTBD2Q8IY47 623 aa20.98■□□□□ 0.95
R3HDM4-205ENST00000589445 ST13P4Q8IZP2 240 aaPredicted RBP20.98■□□□□ 0.95
R3HDM4-205ENST00000589445 AMER2Q8N7J2 671 aa20.98■□□□□ 0.95
R3HDM4-205ENST00000589445 OR14A16Q8NHC5 309 aa20.98■□□□□ 0.95
R3HDM4-205ENST00000589445 DOK4Q8TEW6 326 aa20.98■□□□□ 0.95
R3HDM4-205ENST00000589445 CNPPD1Q9BV87 410 aa20.98■□□□□ 0.95
R3HDM4-205ENST00000589445 REEP4Q9H6H4 257 aa20.98■□□□□ 0.95
R3HDM4-205ENST00000589445 TCF7L2Q9NQB0 619 aa20.98■□□□□ 0.95
R3HDM4-205ENST00000589445 ASIC5Q9NY37 505 aa20.98■□□□□ 0.95
R3HDM4-205ENST00000589445 EHD3Q9NZN3 535 aa20.98■□□□□ 0.95
R3HDM4-205ENST00000589445 CES1P1Q9UKY3 287 aa20.98■□□□□ 0.95
R3HDM4-205ENST00000589445 G3BP2Q9UN86 482 aaKnown RBP20.98■□□□□ 0.95
R3HDM4-205ENST00000589445 WBP11Q9Y2W2 641 aaKnown RBP20.98■□□□□ 0.95
R3HDM4-205ENST00000589445 SCAMP2O15127 329 aaKnown RBP20.97■□□□□ 0.95
R3HDM4-205ENST00000589445 ITGB2P05107 769 aa20.97■□□□□ 0.95
R3HDM4-205ENST00000589445 ALDOCP09972 364 aaKnown RBP20.97■□□□□ 0.95
R3HDM4-205ENST00000589445 NTSP30990 170 aa20.97■□□□□ 0.95
R3HDM4-205ENST00000589445 POLE2P56282 527 aa20.97■□□□□ 0.95
R3HDM4-205ENST00000589445 NME5P56597 212 aa20.97■□□□□ 0.95
R3HDM4-205ENST00000589445 SF3A3Q12874 501 aaKnown RBP eCLIP20.97■□□□□ 0.95
R3HDM4-205ENST00000589445 EXT1Q16394 746 aa20.97■□□□□ 0.95
R3HDM4-205ENST00000589445 OGFOD2Q6N063 350 aa20.97■□□□□ 0.95
R3HDM4-205ENST00000589445 SPATA19Q7Z5L4 167 aa20.97■□□□□ 0.95
R3HDM4-205ENST00000589445 LRRC34Q8IZ02 419 aa20.97■□□□□ 0.95
R3HDM4-205ENST00000589445 LRRC25Q8N386 305 aaPredicted RBP20.97■□□□□ 0.95
R3HDM4-205ENST00000589445 RFWD2Q8NHY2 731 aa20.97■□□□□ 0.95
R3HDM4-205ENST00000589445 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.97■□□□□ 0.95
R3HDM4-205ENST00000589445 ACTRT2Q8TDY3 377 aa20.97■□□□□ 0.95
R3HDM4-205ENST00000589445 CNRIP1Q96F85 164 aaPredicted RBP20.97■□□□□ 0.95
R3HDM4-205ENST00000589445 RBM18Q96H35 190 aaKnown RBP20.97■□□□□ 0.95
R3HDM4-205ENST00000589445 THOC3Q96J01 351 aaKnown RBP20.97■□□□□ 0.95
R3HDM4-205ENST00000589445 MAELQ96JY0 434 aaKnown RBP20.97■□□□□ 0.95
R3HDM4-205ENST00000589445 BBS4Q96RK4 519 aa20.97■□□□□ 0.95
R3HDM4-205ENST00000589445 EBF4Q9BQW3 602 aa20.97■□□□□ 0.95
R3HDM4-205ENST00000589445 OR8D2Q9GZM6 311 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms